RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 UBE2L6O14933 153 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 SCO1O75880 301 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 APOMO95445 188 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 ARMS2P0C7Q2 107 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 CFC1P0CG37 223 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 ZNF56Q15929 161 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 BAGE2Q86Y30 109 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 FMC1Q96HJ9 113 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 EIF5A2Q9GZV4 153 aaKnown RBP3.26□□□□□ -1.89
ATXN3-245ENST00000556958 BIN3Q9NQY0 253 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 ZFP30Q9Y2G7 519 aa3.26□□□□□ -1.89
ATXN3-245ENST00000556958 IGKV3D-20A0A0C4DH25 116 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 MUC21A0A140T8X8 626 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 F8W036 122 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 M0R381 172 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 SH2D1AO60880 128 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 S100A8P05109 93 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 S100A9P06702 114 aaKnown RBP3.25□□□□□ -1.89
ATXN3-245ENST00000556958 BCL2P10415 239 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 RPL18AQ02543 176 aaKnown RBP3.25□□□□□ -1.89
ATXN3-245ENST00000556958 PEA15Q15121 130 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 SS18Q15532 418 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 ZFP82Q8N141 532 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 LINC00526Q96FQ7 95 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 MANBALQ9NQG1 85 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
ATXN3-245ENST00000556958 H3BVH4 76 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 MT-ND4LP03901 98 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 RPL35P42766 123 aaKnown RBP3.24□□□□□ -1.89
ATXN3-245ENST00000556958 GNG4P50150 75 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 RAB5BP61020 215 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 DNLZQ5SXM8 178 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 Q86TA4 180 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 KRTAP11-1Q8IUC1 163 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 KIR2DL4Q99706 377 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 TPPP3Q9BW30 176 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 NEBP20929 6669 aa3.24□□□□□ -1.89
ATXN3-245ENST00000556958 IGKV2D-30A0A075B6S6 120 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 C19orf71A6NCJ1 209 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-245ENST00000556958 PDE6DO43924 150 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 LTAP01374 205 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 RPL28P46779 137 aaKnown RBP3.23□□□□□ -1.89
ATXN3-245ENST00000556958 CRIP1P50238 77 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 MEF2BQ02080 365 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-245ENST00000556958 RHEBQ15382 184 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 CENPWQ5EE01 88 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 SPAG11AQ6PDA7 123 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 NUP35Q8NFH5 326 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 CAMK2N2Q96S95 79 aa3.23□□□□□ -1.89
ATXN3-245ENST00000556958 IGKV2D-26A0A0A0MRZ7 120 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 C1orf196B1AJZ1 125 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 KRTAP4-16G5E9R7 235 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-245ENST00000556958 NUPR1O60356 82 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 SMIM17P0DL12 118 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 XCL1P47992 114 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 FAM229BQ4G0N7 80 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 SPANXN1Q5VSR9 72 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 AMMECR1LQ6DCA0 310 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 COX6B2Q6YFQ2 88 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 OR2D3Q8NGH3 330 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 OR5A1Q8NGJ0 315 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 OCC1Q8TAD7 63 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 IMMP2LQ96T52 175 aa3.22□□□□□ -1.89
ATXN3-245ENST00000556958 COLCA2A8K830 154 aa3.21□□□□□ -1.9
ATXN3-245ENST00000556958 ZNF727A8MUV8 499 aa3.21□□□□□ -1.9
ATXN3-245ENST00000556958 S100A6P06703 90 aa3.21□□□□□ -1.9
ATXN3-245ENST00000556958 MGPP08493 103 aa3.21□□□□□ -1.9
ATXN3-245ENST00000556958 ESDP10768 282 aa3.21□□□□□ -1.9
ATXN3-245ENST00000556958 ADCYAP1P18509 176 aa3.21□□□□□ -1.9
ATXN3-245ENST00000556958 TAGLN2P37802 199 aaKnown RBP3.21□□□□□ -1.9
ATXN3-245ENST00000556958 FAM19A5Q7Z5A7 132 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-245ENST00000556958 DAND5Q8N907 189 aa3.21□□□□□ -1.9
ATXN3-245ENST00000556958 C2orf48Q96LS8 159 aa3.21□□□□□ -1.9
ATXN3-245ENST00000556958 XKRY2A2RUG3 117 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 C5orf52A6NGY3 159 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 M0QXV9 152 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 CCL25O15444 150 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
ATXN3-245ENST00000556958 S100PP25815 95 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 RPS20P60866 119 aaKnown RBP3.2□□□□□ -1.9
ATXN3-245ENST00000556958 COTL1Q14019 142 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 OR10AG1Q8NH19 301 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 PGLYRP4Q96LB8 373 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 C12orf57Q99622 126 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 SMIM7Q9BQ49 75 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
ATXN3-245ENST00000556958 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 ANAPC11Q9NYG5 84 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 UBE2D4Q9Y2X8 147 aa3.2□□□□□ -1.9
ATXN3-245ENST00000556958 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
ATXN3-245ENST00000556958 FAM168BA1KXE4 195 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms