RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 CST9LQ9H4G1 147 aa6.52□□□□□ -1.37
TMEM260-213ENST00000556929 TRAV12-1A0A0B4J245 112 aa6.51□□□□□ -1.37
TMEM260-213ENST00000556929 PRSS29PA6NIE9 313 aa6.51□□□□□ -1.37
TMEM260-213ENST00000556929 UBE2D1P51668 147 aa6.51□□□□□ -1.37
TMEM260-213ENST00000556929 ZC2HC1BQ5TFG8 222 aa6.51□□□□□ -1.37
TMEM260-213ENST00000556929 FAM19A3Q7Z5A8 133 aa6.51□□□□□ -1.37
TMEM260-213ENST00000556929 CHCHD10Q8WYQ3 142 aaPredicted RBP6.51□□□□□ -1.37
TMEM260-213ENST00000556929 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
TMEM260-213ENST00000556929 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
TMEM260-213ENST00000556929 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
TMEM260-213ENST00000556929 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
TMEM260-213ENST00000556929 H0Y8G0 127 aa6.5□□□□□ -1.37
TMEM260-213ENST00000556929 XCL1P47992 114 aa6.5□□□□□ -1.37
TMEM260-213ENST00000556929 HERVK_113P63121 156 aa6.5□□□□□ -1.37
TMEM260-213ENST00000556929 CD164L2Q6UWJ8 174 aa6.5□□□□□ -1.37
TMEM260-213ENST00000556929 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
TMEM260-213ENST00000556929 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
TMEM260-213ENST00000556929 HIST1H2BLQ99880 126 aa6.49□□□□□ -1.37
TMEM260-213ENST00000556929 GEMIN7Q9H840 131 aaKnown RBP6.49□□□□□ -1.37
TMEM260-213ENST00000556929 DNAH2Q9P225 4427 aa6.48□□□□□ -1.37
TMEM260-213ENST00000556929 A0A0J9YXV3 536 aa6.48□□□□□ -1.37
TMEM260-213ENST00000556929 F8VRH5 84 aa6.48□□□□□ -1.37
TMEM260-213ENST00000556929 SYS1-DBNDD2H3BUS1 97 aa6.48□□□□□ -1.37
TMEM260-213ENST00000556929 C3orf79P0CE67 100 aa6.48□□□□□ -1.37
TMEM260-213ENST00000556929 KRTDAPP60985 99 aa6.48□□□□□ -1.37
TMEM260-213ENST00000556929 PET117Q6UWS5 81 aa6.48□□□□□ -1.37
TMEM260-213ENST00000556929 COX7A2LO14548 114 aa6.47□□□□□ -1.37
TMEM260-213ENST00000556929 IGLC3P0DOY3 106 aa6.47□□□□□ -1.37
TMEM260-213ENST00000556929 MALP21145 153 aa6.47□□□□□ -1.37
TMEM260-213ENST00000556929 FOXI1Q12951 378 aa6.47□□□□□ -1.37
TMEM260-213ENST00000556929 ODF1Q14990 250 aa6.47□□□□□ -1.37
TMEM260-213ENST00000556929 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
TMEM260-213ENST00000556929 Q6ZRN7 208 aaPredicted RBP6.47□□□□□ -1.37
TMEM260-213ENST00000556929 SPATA12Q7Z6I5 190 aa6.47□□□□□ -1.37
TMEM260-213ENST00000556929 CHAC1Q9BUX1 264 aa6.47□□□□□ -1.37
TMEM260-213ENST00000556929 RYR2Q92736 4967 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 IGLV4-69A0A075B6H9 119 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 IGHV3OR16-9A0A0B4J2B5 98 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 C20orf202A1L168 122 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 H3BRM9 83 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 APOMO95445 188 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 AKR1D1P51857 326 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 COX6A2Q02221 97 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 CFAP161Q6P656 301 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 C5orf38Q86SI9 138 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 LINC01561Q8N1V8 128 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 MRPL35Q9NZE8 188 aaKnown RBP6.46□□□□□ -1.38
TMEM260-213ENST00000556929 DNAH10Q8IVF4 4471 aa6.46□□□□□ -1.38
TMEM260-213ENST00000556929 KMT2CQ8NEZ4 4911 aaKnown RBP6.46□□□□□ -1.38
TMEM260-213ENST00000556929 A0A087WZ39 114 aa6.45□□□□□ -1.38
TMEM260-213ENST00000556929 DPM2O94777 84 aa6.45□□□□□ -1.38
TMEM260-213ENST00000556929 IGKCP01834 107 aa6.45□□□□□ -1.38
TMEM260-213ENST00000556929 PLNP26678 52 aa6.45□□□□□ -1.38
TMEM260-213ENST00000556929 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
TMEM260-213ENST00000556929 CDKN2A-AS1Q9UH64 79 aa6.45□□□□□ -1.38
TMEM260-213ENST00000556929 IGLV5-45A0A087WSX0 123 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 IGHV1-58A0A0C4DH39 117 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 C11orf86A6NJI1 115 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 RTL8CO15255 209 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 ZNF22P17026 224 aaPredicted RBP6.44□□□□□ -1.38
TMEM260-213ENST00000556929 C14orf177Q52M58 125 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 TMEM170BQ5T4T1 132 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 LINC01545Q5VT33 79 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 LINC00336Q6ZUF6 198 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 MAPKAPK5-AS1Q8N8E1 139 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 OR10D4PQ8NGN7 298 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 DNAH17Q9UFH2 4485 aa6.44□□□□□ -1.38
TMEM260-213ENST00000556929 USP17L23D6RBM5 183 aa6.43□□□□□ -1.38
TMEM260-213ENST00000556929 KRTAP4-12Q9BQ66 201 aa6.43□□□□□ -1.38
TMEM260-213ENST00000556929 PMCHL2Q9BQD1 86 aa6.43□□□□□ -1.38
TMEM260-213ENST00000556929 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
TMEM260-213ENST00000556929 IGHV3-64A0A075B6Q5 118 aa6.42□□□□□ -1.38
TMEM260-213ENST00000556929 A0A087WTM6 91 aa6.42□□□□□ -1.38
TMEM260-213ENST00000556929 LRCOL1A6NCL2 159 aa6.42□□□□□ -1.38
TMEM260-213ENST00000556929 ZNF561-AS1K7EIQ3 104 aa6.42□□□□□ -1.38
TMEM260-213ENST00000556929 LECT2O14960 151 aa6.42□□□□□ -1.38
TMEM260-213ENST00000556929 EIF4EBP3O60516 100 aaPredicted RBP6.42□□□□□ -1.38
TMEM260-213ENST00000556929 HERVK_113P61574 105 aa6.42□□□□□ -1.38
TMEM260-213ENST00000556929 CDPF1Q6NVV7 123 aa6.42□□□□□ -1.38
TMEM260-213ENST00000556929 ORAOV1Q8WV07 137 aa6.42□□□□□ -1.38
TMEM260-213ENST00000556929 SCGB1D1O95968 90 aa6.41□□□□□ -1.38
TMEM260-213ENST00000556929 PRSS2P07478 247 aa6.41□□□□□ -1.38
TMEM260-213ENST00000556929 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
TMEM260-213ENST00000556929 C15orf56Q8N910 161 aa6.41□□□□□ -1.38
TMEM260-213ENST00000556929 GVQW2A0A096LPI5 108 aaPredicted RBP6.4□□□□□ -1.38
TMEM260-213ENST00000556929 hDV102S1A0JD36 115 aa6.4□□□□□ -1.38
TMEM260-213ENST00000556929 TMEM223A0PJW6 202 aa6.4□□□□□ -1.38
TMEM260-213ENST00000556929 SMIM1B2RUZ4 78 aa6.4□□□□□ -1.38
TMEM260-213ENST00000556929 Q8N814 137 aa6.4□□□□□ -1.38
TMEM260-213ENST00000556929 TOMM7Q9P0U1 55 aa6.4□□□□□ -1.38
TMEM260-213ENST00000556929 SPAG11BQ08648 103 aa6.39□□□□□ -1.39
TMEM260-213ENST00000556929 WFDC2Q14508 124 aa6.39□□□□□ -1.39
TMEM260-213ENST00000556929 HIGD2BQ4VC39 106 aa6.39□□□□□ -1.39
TMEM260-213ENST00000556929 C6orf226Q5I0X4 101 aa6.39□□□□□ -1.39
TMEM260-213ENST00000556929 Q8IZM0 81 aa6.39□□□□□ -1.39
TMEM260-213ENST00000556929 C2orf48Q96LS8 159 aa6.39□□□□□ -1.39
TMEM260-213ENST00000556929 RYR3Q15413 4870 aa6.38□□□□□ -1.39
TMEM260-213ENST00000556929 F8WDY8 70 aa6.38□□□□□ -1.39
TMEM260-213ENST00000556929 JOSD1Q15040 202 aaPredicted RBP6.38□□□□□ -1.39
TMEM260-213ENST00000556929 COX7B2Q8TF08 81 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms