RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 SPTSSBQ8NFR3 76 aa-3.13□□□□□ -2.91
LINC00648-203ENST00000556923 KDM5AP29375 1690 aaKnown RBP-3.14□□□□□ -2.91
LINC00648-203ENST00000556923 M0R135 149 aa-3.14□□□□□ -2.91
LINC00648-203ENST00000556923 ARHGEF10O15013 1369 aa-3.14□□□□□ -2.91
LINC00648-203ENST00000556923 SMG6Q86US8 1419 aaKnown RBP-3.15□□□□□ -2.91
LINC00648-203ENST00000556923 R4GMQ9 66 aa-3.15□□□□□ -2.91
LINC00648-203ENST00000556923 PBRM1Q86U86 1689 aa-3.15□□□□□ -2.91
LINC00648-203ENST00000556923 CDK5RAP2Q96SN8 1893 aa-3.16□□□□□ -2.91
LINC00648-203ENST00000556923 SAR1AQ9NR31 198 aa-3.16□□□□□ -2.92
LINC00648-203ENST00000556923 SPTAN1Q13813 2472 aaKnown RBP-3.16□□□□□ -2.92
LINC00648-203ENST00000556923 MYH6P13533 1939 aa-3.17□□□□□ -2.92
LINC00648-203ENST00000556923 DAPK1P53355 1430 aa-3.17□□□□□ -2.92
LINC00648-203ENST00000556923 CTXND1A0A1B0GTU2 59 aa-3.17□□□□□ -2.92
LINC00648-203ENST00000556923 PPP1R17O96001 155 aa-3.17□□□□□ -2.92
LINC00648-203ENST00000556923 KRTAP8-1Q8IUC2 63 aa-3.17□□□□□ -2.92
LINC00648-203ENST00000556923 DEFB123Q8N688 67 aa-3.17□□□□□ -2.92
LINC00648-203ENST00000556923 AMELXQ99217 191 aa-3.17□□□□□ -2.92
LINC00648-203ENST00000556923 NWD2Q9ULI1 1742 aa-3.17□□□□□ -2.92
LINC00648-203ENST00000556923 SPTBN5Q9NRC6 3674 aaKnown RBP-3.18□□□□□ -2.92
LINC00648-203ENST00000556923 M0R129 80 aa-3.18□□□□□ -2.92
LINC00648-203ENST00000556923 NCS1P62166 190 aa-3.18□□□□□ -2.92
LINC00648-203ENST00000556923 Q6JHZ5 121 aa-3.18□□□□□ -2.92
LINC00648-203ENST00000556923 SKA2Q8WVK7 121 aaPredicted RBP-3.18□□□□□ -2.92
LINC00648-203ENST00000556923 PXDNQ92626 1479 aa-3.18□□□□□ -2.92
LINC00648-203ENST00000556923 MRC1P22897 1456 aa-3.19□□□□□ -2.92
LINC00648-203ENST00000556923 CBLN1P23435 193 aa-3.19□□□□□ -2.92
LINC00648-203ENST00000556923 MAFIPQ8WZ33 124 aa-3.19□□□□□ -2.92
LINC00648-203ENST00000556923 SBF2Q86WG5 1849 aa-3.19□□□□□ -2.92
LINC00648-203ENST00000556923 CENPEQ02224 2701 aa-3.2□□□□□ -2.92
LINC00648-203ENST00000556923 CENPHQ9H3R5 247 aa-3.2□□□□□ -2.92
LINC00648-203ENST00000556923 CSMD2Q7Z408 3487 aa-3.2□□□□□ -2.92
LINC00648-203ENST00000556923 MT1FP04733 61 aa-3.21□□□□□ -2.92
LINC00648-203ENST00000556923 CCL8P80075 99 aa-3.21□□□□□ -2.92
LINC00648-203ENST00000556923 FMN2Q9NZ56 1722 aa-3.22□□□□□ -2.92
LINC00648-203ENST00000556923 PITX3O75364 302 aa-3.22□□□□□ -2.92
LINC00648-203ENST00000556923 MGAQ8IWI9 3026 aa-3.22□□□□□ -2.93
LINC00648-203ENST00000556923 IL5P05113 134 aa-3.24□□□□□ -2.93
LINC00648-203ENST00000556923 PIPP12273 146 aaPredicted RBP-3.24□□□□□ -2.93
LINC00648-203ENST00000556923 S100A7L2Q5SY68 101 aa-3.24□□□□□ -2.93
LINC00648-203ENST00000556923 TMEM170BQ5T4T1 132 aa-3.24□□□□□ -2.93
LINC00648-203ENST00000556923 DMDP11532 3685 aa-3.25□□□□□ -2.93
LINC00648-203ENST00000556923 SSSCA1O60232 199 aa-3.25□□□□□ -2.93
LINC00648-203ENST00000556923 MRPL40Q9NQ50 206 aaKnown RBP-3.25□□□□□ -2.93
LINC00648-203ENST00000556923 APLNQ9ULZ1 77 aa-3.25□□□□□ -2.93
LINC00648-203ENST00000556923 MAP3K1Q13233 1512 aa-3.25□□□□□ -2.93
LINC00648-203ENST00000556923 FAM236AA0A1B0GUQ0 79 aa-3.26□□□□□ -2.93
LINC00648-203ENST00000556923 FAM236BA0A1B0GV22 79 aa-3.26□□□□□ -2.93
LINC00648-203ENST00000556923 ASIPP42127 132 aa-3.26□□□□□ -2.93
LINC00648-203ENST00000556923 CTAGE3PQ8IX95 158 aa-3.26□□□□□ -2.93
LINC00648-203ENST00000556923 DDA1Q9BW61 102 aa-3.26□□□□□ -2.93
LINC00648-203ENST00000556923 NSD3Q9BZ95 1437 aa-3.27□□□□□ -2.93
LINC00648-203ENST00000556923 GAPVD1Q14C86 1478 aa-3.27□□□□□ -2.93
LINC00648-203ENST00000556923 BCORQ6W2J9 1755 aa-3.27□□□□□ -2.93
LINC00648-203ENST00000556923 SELENOSQ9BQE4 189 aa-3.27□□□□□ -2.93
LINC00648-203ENST00000556923 TMEM2Q9UHN6 1383 aa-3.27□□□□□ -2.93
LINC00648-203ENST00000556923 MAGI1Q96QZ7 1491 aaPredicted RBP-3.28□□□□□ -2.93
LINC00648-203ENST00000556923 SPEGQ15772 3267 aa-3.28□□□□□ -2.93
LINC00648-203ENST00000556923 ARHGEF5Q12774 1597 aa-3.28□□□□□ -2.93
LINC00648-203ENST00000556923 COX17Q14061 63 aa-3.28□□□□□ -2.93
LINC00648-203ENST00000556923 MMGT1Q8N4V1 131 aa-3.28□□□□□ -2.93
LINC00648-203ENST00000556923 GINS2Q9Y248 185 aa-3.28□□□□□ -2.93
LINC00648-203ENST00000556923 A0A087WVE0 104 aa-3.29□□□□□ -2.94
LINC00648-203ENST00000556923 FABP1P07148 127 aa-3.29□□□□□ -2.94
LINC00648-203ENST00000556923 ALX1Q15699 326 aa-3.29□□□□□ -2.94
LINC00648-203ENST00000556923 Q6ZUT4 128 aa-3.29□□□□□ -2.94
LINC00648-203ENST00000556923 HSPB11Q9Y547 144 aa-3.29□□□□□ -2.94
LINC00648-203ENST00000556923 TSTD3H0UI37 97 aa-3.3□□□□□ -2.94
LINC00648-203ENST00000556923 WFDC9Q8NEX5 89 aa-3.3□□□□□ -2.94
LINC00648-203ENST00000556923 KIF21AQ7Z4S6 1674 aa-3.3□□□□□ -2.94
LINC00648-203ENST00000556923 SIX6O95475 246 aa-3.31□□□□□ -2.94
LINC00648-203ENST00000556923 SPTSSAQ969W0 71 aa-3.31□□□□□ -2.94
LINC00648-203ENST00000556923 PSMG3Q9BT73 122 aaPredicted RBP-3.31□□□□□ -2.94
LINC00648-203ENST00000556923 V9GYQ6 96 aa-3.31□□□□□ -2.94
LINC00648-203ENST00000556923 PAPPA2Q9BXP8 1791 aa-3.31□□□□□ -2.94
LINC00648-203ENST00000556923 DEFB4AO15263 64 aa-3.32□□□□□ -2.94
LINC00648-203ENST00000556923 IGLC6P0CF74 106 aa-3.32□□□□□ -2.94
LINC00648-203ENST00000556923 CCDC153Q494R4 210 aa-3.32□□□□□ -2.94
LINC00648-203ENST00000556923 CLPSL2Q6UWE3 100 aa-3.32□□□□□ -2.94
LINC00648-203ENST00000556923 SEC11CQ9BY50 192 aa-3.32□□□□□ -2.94
LINC00648-203ENST00000556923 SNCGO76070 127 aa-3.33□□□□□ -2.94
LINC00648-203ENST00000556923 MORN2Q502X0 79 aa-3.33□□□□□ -2.94
LINC00648-203ENST00000556923 V9GYH0 126 aa-3.33□□□□□ -2.94
LINC00648-203ENST00000556923 NDUFB6O95139 128 aa-3.34□□□□□ -2.94
LINC00648-203ENST00000556923 IFNGP01579 166 aa-3.35□□□□□ -2.95
LINC00648-203ENST00000556923 DBIP07108 87 aaKnown RBP-3.35□□□□□ -2.95
LINC00648-203ENST00000556923 HIST1H1AQ02539 215 aaPredicted RBP-3.35□□□□□ -2.95
LINC00648-203ENST00000556923 SPANXCQ9NY87 97 aa-3.35□□□□□ -2.95
LINC00648-203ENST00000556923 LENEPQ9Y5L5 61 aa-3.35□□□□□ -2.95
LINC00648-203ENST00000556923 DOCK2Q92608 1830 aa-3.35□□□□□ -2.95
LINC00648-203ENST00000556923 C10orf128Q5T292 105 aa-3.36□□□□□ -2.95
LINC00648-203ENST00000556923 CRYBG3Q68DQ2 2970 aa-3.36□□□□□ -2.95
LINC00648-203ENST00000556923 IFT140Q96RY7 1462 aa-3.36□□□□□ -2.95
LINC00648-203ENST00000556923 CICQ96RK0 1608 aaPredicted RBP-3.37□□□□□ -2.95
LINC00648-203ENST00000556923 SPAARA0A1B0GVQ0 90 aa-3.37□□□□□ -2.95
LINC00648-203ENST00000556923 HCG22E2RYF7 251 aa-3.37□□□□□ -2.95
LINC00648-203ENST00000556923 RRAS2P62070 204 aaPredicted RBP-3.37□□□□□ -2.95
LINC00648-203ENST00000556923 Q6AWC8 147 aa-3.37□□□□□ -2.95
LINC00648-203ENST00000556923 CEP350Q5VT06 3117 aa-3.37□□□□□ -2.95
LINC00648-203ENST00000556923 CDC42BPAQ5VT25 1732 aa-3.37□□□□□ -2.95
LINC00648-203ENST00000556923 PATJQ8NI35 1801 aa-3.37□□□□□ -2.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms