RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 DIRC1Q969H9 104 aa10.55□□□□□ -0.72
CHGA-206ENST00000556876 SMDT1Q9H4I9 107 aa10.55□□□□□ -0.72
CHGA-206ENST00000556876 NAT8Q9UHE5 227 aa10.55□□□□□ -0.72
CHGA-206ENST00000556876 HBBP68871 147 aa10.54□□□□□ -0.72
CHGA-206ENST00000556876 RNASE13Q5GAN3 156 aaKnown RBP10.54□□□□□ -0.72
CHGA-206ENST00000556876 C1orf137Q5JT78 98 aa10.54□□□□□ -0.72
CHGA-206ENST00000556876 IGHV3OR16-9A0A0B4J2B5 98 aa10.53□□□□□ -0.72
CHGA-206ENST00000556876 TNFRSF6BO95407 300 aa10.53□□□□□ -0.72
CHGA-206ENST00000556876 TLX1NBP0CAT3 122 aa10.53□□□□□ -0.72
CHGA-206ENST00000556876 RPL23P62829 140 aaKnown RBP10.53□□□□□ -0.72
CHGA-206ENST00000556876 ODF1Q14990 250 aa10.53□□□□□ -0.72
CHGA-206ENST00000556876 ADIRFQ15847 76 aa10.53□□□□□ -0.72
CHGA-206ENST00000556876 ORAOV1Q8WV07 137 aa10.53□□□□□ -0.72
CHGA-206ENST00000556876 SMIM2Q9BVW6 85 aa10.53□□□□□ -0.72
CHGA-206ENST00000556876 RAB5AP20339 215 aa10.52□□□□□ -0.73
CHGA-206ENST00000556876 PEA15Q15121 130 aa10.52□□□□□ -0.73
CHGA-206ENST00000556876 OPRPNQ99935 248 aaPredicted RBP10.52□□□□□ -0.73
CHGA-206ENST00000556876 TGIF2-C20orf24A0A0A6YYL0 155 aa10.51□□□□□ -0.73
CHGA-206ENST00000556876 IFITM10A6NMD0 228 aa10.5□□□□□ -0.73
CHGA-206ENST00000556876 IFI27P40305 119 aaPredicted RBP10.5□□□□□ -0.73
CHGA-206ENST00000556876 PHF5AQ7RTV0 110 aaKnown RBP10.5□□□□□ -0.73
CHGA-206ENST00000556876 A0A087WZ39 114 aa10.49□□□□□ -0.73
CHGA-206ENST00000556876 IGLV7-43P04211 117 aa10.49□□□□□ -0.73
CHGA-206ENST00000556876 PYGO1Q9Y3Y4 419 aa10.49□□□□□ -0.73
CHGA-206ENST00000556876 D6R8Y8 96 aa10.48□□□□□ -0.73
CHGA-206ENST00000556876 RPL39P62891 51 aaKnown RBP10.48□□□□□ -0.73
CHGA-206ENST00000556876 TRBV30A0A0K0K1B3 111 aa10.47□□□□□ -0.73
CHGA-206ENST00000556876 ATP5L2Q7Z4Y8 100 aa10.47□□□□□ -0.73
CHGA-206ENST00000556876 ORMDL3Q8N138 153 aa10.47□□□□□ -0.73
CHGA-206ENST00000556876 LINC01561Q8N1V8 128 aa10.47□□□□□ -0.73
CHGA-206ENST00000556876 IGLV1-50A0A075B6I6 118 aa10.46□□□□□ -0.73
CHGA-206ENST00000556876 LAMTOR2Q9Y2Q5 125 aa10.46□□□□□ -0.73
CHGA-206ENST00000556876 hCG_2014768A0A024R1R8 64 aa10.45□□□□□ -0.74
CHGA-206ENST00000556876 H0Y9J4 135 aa10.45□□□□□ -0.74
CHGA-206ENST00000556876 UNQ6190/PRO20217Q6UXQ8 127 aa10.45□□□□□ -0.74
CHGA-206ENST00000556876 PACRGQ96M98 296 aaPredicted RBP10.45□□□□□ -0.74
CHGA-206ENST00000556876 A0A1B0GXF2 115 aa10.44□□□□□ -0.74
CHGA-206ENST00000556876 MRPL54Q6P161 138 aaKnown RBP10.44□□□□□ -0.74
CHGA-206ENST00000556876 TMEM136Q6ZRR5 245 aa10.44□□□□□ -0.74
CHGA-206ENST00000556876 FAM104AQ969W3 186 aa10.44□□□□□ -0.74
CHGA-206ENST00000556876 TMEM141Q96I45 108 aa10.44□□□□□ -0.74
CHGA-206ENST00000556876 C2orf88Q9BSF0 95 aa10.44□□□□□ -0.74
CHGA-206ENST00000556876 C6orf48Q9UBA6 75 aa10.44□□□□□ -0.74
CHGA-206ENST00000556876 NDUFC2-KCTD14E9PQ53 114 aa10.43□□□□□ -0.74
CHGA-206ENST00000556876 NPYP01303 97 aa10.43□□□□□ -0.74
CHGA-206ENST00000556876 NPSP0C0P6 89 aa10.43□□□□□ -0.74
CHGA-206ENST00000556876 GAGE2EQ4V326 116 aa10.43□□□□□ -0.74
CHGA-206ENST00000556876 Q6ZN92 141 aa10.43□□□□□ -0.74
CHGA-206ENST00000556876 TEX43Q6ZNM6 134 aa10.43□□□□□ -0.74
CHGA-206ENST00000556876 GAGE2DQ9UEU5 116 aa10.43□□□□□ -0.74
CHGA-206ENST00000556876 PRSS47A8MTI9 375 aa10.42□□□□□ -0.74
CHGA-206ENST00000556876 RPL13AP40429 203 aaKnown RBP10.42□□□□□ -0.74
CHGA-206ENST00000556876 UBE2BP63146 152 aa10.42□□□□□ -0.74
CHGA-206ENST00000556876 C10orf25Q5T742 122 aa10.42□□□□□ -0.74
CHGA-206ENST00000556876 PRELID3AQ96N28 172 aa10.42□□□□□ -0.74
CHGA-206ENST00000556876 K7EMI3 77 aa10.41□□□□□ -0.74
CHGA-206ENST00000556876 G0S2P27469 103 aa10.41□□□□□ -0.74
CHGA-206ENST00000556876 LINC00242Q5T6M2 205 aa10.41□□□□□ -0.74
CHGA-206ENST00000556876 FAM19A5Q7Z5A7 132 aaPredicted RBP10.41□□□□□ -0.74
CHGA-206ENST00000556876 C9JQL5 133 aa10.4□□□□□ -0.74
CHGA-206ENST00000556876 M0QXV9 152 aa10.4□□□□□ -0.74
CHGA-206ENST00000556876 PRSS2P07478 247 aa10.4□□□□□ -0.74
CHGA-206ENST00000556876 KIAA0087Q14695 138 aa10.4□□□□□ -0.74
CHGA-206ENST00000556876 PRR26Q8N8Z3 221 aa10.4□□□□□ -0.74
CHGA-206ENST00000556876 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
CHGA-206ENST00000556876 FAM168BA1KXE4 195 aa10.39□□□□□ -0.75
CHGA-206ENST00000556876 UBE2D1P51668 147 aa10.39□□□□□ -0.75
CHGA-206ENST00000556876 SEC11AP67812 179 aa10.39□□□□□ -0.75
CHGA-206ENST00000556876 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
CHGA-206ENST00000556876 VCX2Q9H322 139 aa10.39□□□□□ -0.75
CHGA-206ENST00000556876 MAP1LC3AQ9H492 121 aa10.39□□□□□ -0.75
CHGA-206ENST00000556876 CYSLTR1Q9Y271 337 aa10.39□□□□□ -0.75
CHGA-206ENST00000556876 CARHSP1Q9Y2V2 147 aaKnown RBP10.39□□□□□ -0.75
CHGA-206ENST00000556876 CKS1BP61024 79 aa10.37□□□□□ -0.75
CHGA-206ENST00000556876 ORMDL2Q53FV1 153 aa10.37□□□□□ -0.75
CHGA-206ENST00000556876 LBHQ53QV2 105 aaPredicted RBP10.37□□□□□ -0.75
CHGA-206ENST00000556876 PNRC1Q12796 327 aaPredicted RBP10.36□□□□□ -0.75
CHGA-206ENST00000556876 C6orf226Q5I0X4 101 aa10.36□□□□□ -0.75
CHGA-206ENST00000556876 NUPR1O60356 82 aa10.35□□□□□ -0.75
CHGA-206ENST00000556876 SRSF3P84103 164 aaKnown RBP10.35□□□□□ -0.75
CHGA-206ENST00000556876 Q8N8P6 123 aa10.35□□□□□ -0.75
CHGA-206ENST00000556876 C2orf66Q6UXQ4 117 aa10.34□□□□□ -0.75
CHGA-206ENST00000556876 Q8IZM0 81 aa10.34□□□□□ -0.75
CHGA-206ENST00000556876 ANAPC16Q96DE5 110 aa10.34□□□□□ -0.75
CHGA-206ENST00000556876 AMELXQ99217 191 aa10.34□□□□□ -0.75
CHGA-206ENST00000556876 LOC389332A0A1B0GUA5 103 aa10.33□□□□□ -0.76
CHGA-206ENST00000556876 ZNF861PO60384 105 aa10.33□□□□□ -0.76
CHGA-206ENST00000556876 MT-ND4LP03901 98 aa10.33□□□□□ -0.76
CHGA-206ENST00000556876 HERVK_113P63121 156 aa10.33□□□□□ -0.76
CHGA-206ENST00000556876 C2orf82Q6UX34 121 aa10.33□□□□□ -0.76
CHGA-206ENST00000556876 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
CHGA-206ENST00000556876 NXT2Q9NPJ8 142 aaKnown RBP10.33□□□□□ -0.76
CHGA-206ENST00000556876 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
CHGA-206ENST00000556876 KRTAP11-1Q8IUC1 163 aa10.32□□□□□ -0.76
CHGA-206ENST00000556876 ALKBH7Q9BT30 221 aaPredicted RBP10.32□□□□□ -0.76
CHGA-206ENST00000556876 CXCL5P42830 114 aa10.31□□□□□ -0.76
CHGA-206ENST00000556876 C9orf129Q5T035 196 aaKnown RBP10.31□□□□□ -0.76
CHGA-206ENST00000556876 KRTAP7-1Q8IUC3 87 aa10.31□□□□□ -0.76
CHGA-206ENST00000556876 TOMM7Q9P0U1 55 aa10.31□□□□□ -0.76
CHGA-206ENST00000556876 LINC01549A6NIU2 74 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms