RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 UBE2L6O14933 153 aa5.03□□□□□ -1.6
HNRNPC-226ENST00000556628 PYY3Q5JQD4 70 aa5.03□□□□□ -1.6
HNRNPC-226ENST00000556628 CLPSL2Q6UWE3 100 aa5.03□□□□□ -1.6
HNRNPC-226ENST00000556628 FA2HQ7L5A8 372 aa5.03□□□□□ -1.6
HNRNPC-226ENST00000556628 LINC00269Q8N2A0 174 aa5.03□□□□□ -1.6
HNRNPC-226ENST00000556628 TMEM243Q9BU79 118 aa5.03□□□□□ -1.6
HNRNPC-226ENST00000556628 TRAV8-4A0A0B4J246 113 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 PRSS47A8MTI9 375 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 USP17L23D6RBM5 183 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 TNFRSF6BO95407 300 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 NPYP01303 97 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 REG3AQ06141 175 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 COTL1Q14019 142 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 DGAT2L7PQ6IED9 249 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 SCXQ7RTU7 201 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 CHAC1Q9BUX1 264 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 NXT2Q9NPJ8 142 aaKnown RBP5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 PRR34Q9NV39 138 aa5.02□□□□□ -1.61
HNRNPC-226ENST00000556628 IGLV10-54A0A075B6I4 117 aa5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 A0A1B0GUV1 79 aa5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 K7EMI3 77 aa5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 SCGB1D1O95968 90 aa5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 IFI27P40305 119 aaPredicted RBP5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 S100A12P80511 92 aa5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 URB1-AS1Q96HZ7 61 aa5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 C20orf78Q9BR46 151 aa5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 HSPB8Q9UJY1 196 aa5.01□□□□□ -1.61
HNRNPC-226ENST00000556628 LOC389332A0A1B0GUA5 103 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 LINC01546A6NGU7 62 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 SMKR1H3BMG3 65 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 TRIAP1O43715 76 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 LEPROTL1O95214 131 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 NCR2O95944 276 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 KRTDAPP60985 99 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 Q8N8P6 123 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 NRACQ8N912 160 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 C20orf203Q8NBC4 194 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 DEFB104AQ8WTQ1 72 aa5□□□□□ -1.61
HNRNPC-226ENST00000556628 IGLV4-60A0A075B6I1 120 aa4.99□□□□□ -1.61
HNRNPC-226ENST00000556628 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.99□□□□□ -1.61
HNRNPC-226ENST00000556628 hDV102S1A0JD36 115 aa4.99□□□□□ -1.61
HNRNPC-226ENST00000556628 HBDP02042 147 aa4.99□□□□□ -1.61
HNRNPC-226ENST00000556628 PRSS1P07477 247 aa4.99□□□□□ -1.61
HNRNPC-226ENST00000556628 AMMECR1LQ6DCA0 310 aa4.99□□□□□ -1.61
HNRNPC-226ENST00000556628 C9orf163Q8N9P6 203 aa4.99□□□□□ -1.61
HNRNPC-226ENST00000556628 CIRBP-AS1Q8TBR5 109 aa4.99□□□□□ -1.61
HNRNPC-226ENST00000556628 MAP1LC3CQ9BXW4 147 aa4.99□□□□□ -1.61
HNRNPC-226ENST00000556628 TRAV26-2A0A0B4J265 109 aa4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 IGKV3OR2-268A0A0C4DH90 116 aa4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 C20orf202A1L168 122 aa4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 H7C423 109 aa4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 C3orf79P0CE67 100 aa4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 G0S2P27469 103 aa4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 SUMO2P61956 95 aaKnown RBP4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 RPL32P62910 135 aaKnown RBP4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 PMCHL1Q16048 86 aa4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 SMIM2Q9BVW6 85 aa4.98□□□□□ -1.61
HNRNPC-226ENST00000556628 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 TRBV6-5A0A0K0K1A5 114 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 SDHAF1A6NFY7 115 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 LINC01549A6NIU2 74 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 TSTD3H0UI37 97 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 SYS1-DBNDD2H3BUS1 97 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 GAS8-AS1O95177 125 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 FCER1GP30273 86 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 ORMDL2Q53FV1 153 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 CFAP161Q6P656 301 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 KRTAP26-1Q6PEX3 210 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 PET117Q6UWS5 81 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 RPL39LQ96EH5 51 aaKnown RBP4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 DPH3Q96FX2 82 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 TMEM101Q96IK0 257 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 ST20Q9HBF5 79 aa4.97□□□□□ -1.61
HNRNPC-226ENST00000556628 IGHV3-64A0A075B6Q5 118 aa4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 IGKV2-29A2NJV5 120 aaPredicted RBP4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 I3L3M4 83 aa4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 VCYO14598 125 aa4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 TCAPO15273 167 aa4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 ATP5LO75964 103 aa4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 ZNF25P17030 456 aaPredicted RBP4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 RPL37AP61513 92 aaKnown RBP4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 TEX43Q6ZNM6 134 aa4.96□□□□□ -1.62
HNRNPC-226ENST00000556628 A0A096LNJ9 63 aa4.95□□□□□ -1.62
HNRNPC-226ENST00000556628 PCP4L1A6NKN8 68 aa4.95□□□□□ -1.62
HNRNPC-226ENST00000556628 KRTAP29-1A8MX34 341 aaPredicted RBP4.95□□□□□ -1.62
HNRNPC-226ENST00000556628 FGF6P10767 208 aa4.95□□□□□ -1.62
HNRNPC-226ENST00000556628 CNBPP62633 177 aaKnown RBP4.95□□□□□ -1.62
HNRNPC-226ENST00000556628 KIR2DL4Q99706 377 aa4.95□□□□□ -1.62
HNRNPC-226ENST00000556628 VAMP8Q9BV40 100 aa4.95□□□□□ -1.62
HNRNPC-226ENST00000556628 TRBV27A0A0K0K1C4 114 aa4.94□□□□□ -1.62
HNRNPC-226ENST00000556628 POLR2KP53803 58 aaKnown RBP4.94□□□□□ -1.62
HNRNPC-226ENST00000556628 SMAGPQ0VAQ4 97 aa4.94□□□□□ -1.62
HNRNPC-226ENST00000556628 SDIM1Q6ZPB5 146 aa4.94□□□□□ -1.62
HNRNPC-226ENST00000556628 OR5A1Q8NGJ0 315 aa4.94□□□□□ -1.62
HNRNPC-226ENST00000556628 CHCHD10Q8WYQ3 142 aaPredicted RBP4.94□□□□□ -1.62
HNRNPC-226ENST00000556628 IFI27L1Q96BM0 104 aa4.94□□□□□ -1.62
HNRNPC-226ENST00000556628 OXTP01178 125 aa4.93□□□□□ -1.62
HNRNPC-226ENST00000556628 SS18Q15532 418 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms