RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TYMSOSQ8TAI1 123 aa8.21□□□□□ -1.1
ACTN1-219ENST00000556432 C6orf48Q9UBA6 75 aa8.21□□□□□ -1.1
ACTN1-219ENST00000556432 UBE2D4Q9Y2X8 147 aa8.21□□□□□ -1.1
ACTN1-219ENST00000556432 TRBV27A0A0K0K1C4 114 aa8.2□□□□□ -1.1
ACTN1-219ENST00000556432 GATCO43716 136 aaKnown RBP8.2□□□□□ -1.1
ACTN1-219ENST00000556432 TLX1NBP0CAT3 122 aa8.2□□□□□ -1.1
ACTN1-219ENST00000556432 POLR2KP53803 58 aaKnown RBP8.2□□□□□ -1.1
ACTN1-219ENST00000556432 TMEM241Q24JQ0 296 aa8.2□□□□□ -1.1
ACTN1-219ENST00000556432 KRTAP7-1Q8IUC3 87 aa8.2□□□□□ -1.1
ACTN1-219ENST00000556432 BORCS7Q96B45 105 aa8.2□□□□□ -1.1
ACTN1-219ENST00000556432 CSDC2Q9Y534 153 aaKnown RBP8.2□□□□□ -1.1
ACTN1-219ENST00000556432 RAB14P61106 215 aa8.19□□□□□ -1.1
ACTN1-219ENST00000556432 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
ACTN1-219ENST00000556432 ADIRFQ15847 76 aa8.19□□□□□ -1.1
ACTN1-219ENST00000556432 FAM231DQ6ZW35 169 aa8.19□□□□□ -1.1
ACTN1-219ENST00000556432 A0A087X002 238 aa8.18□□□□□ -1.1
ACTN1-219ENST00000556432 VCYO14598 125 aa8.18□□□□□ -1.1
ACTN1-219ENST00000556432 CRYGAP11844 174 aa8.18□□□□□ -1.1
ACTN1-219ENST00000556432 CLLU1Q5K131 121 aa8.18□□□□□ -1.1
ACTN1-219ENST00000556432 CRCT1Q9UGL9 99 aa8.18□□□□□ -1.1
ACTN1-219ENST00000556432 TMEM18Q96B42 140 aa8.17□□□□□ -1.1
ACTN1-219ENST00000556432 KIR2DL4Q99706 377 aa8.17□□□□□ -1.1
ACTN1-219ENST00000556432 NAT8Q9UHE5 227 aa8.17□□□□□ -1.1
ACTN1-219ENST00000556432 A8MWL6 223 aa8.16□□□□□ -1.1
ACTN1-219ENST00000556432 SMKR1H3BMG3 65 aa8.16□□□□□ -1.1
ACTN1-219ENST00000556432 FAM74A3Q4VXF1 159 aa8.16□□□□□ -1.1
ACTN1-219ENST00000556432 V9GYV3 84 aa8.16□□□□□ -1.1
ACTN1-219ENST00000556432 TPRXLQ17RH7 258 aa8.15□□□□□ -1.1
ACTN1-219ENST00000556432 CT83Q5H943 113 aa8.15□□□□□ -1.1
ACTN1-219ENST00000556432 CTDSP1Q9GZU7 261 aa8.15□□□□□ -1.1
ACTN1-219ENST00000556432 OSTCQ9NRP0 149 aa8.15□□□□□ -1.1
ACTN1-219ENST00000556432 IGLV7-46A0A075B6I9 117 aa8.14□□□□□ -1.11
ACTN1-219ENST00000556432 IGHV3OR16-9A0A0B4J2B5 98 aa8.14□□□□□ -1.11
ACTN1-219ENST00000556432 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
ACTN1-219ENST00000556432 NUPR1O60356 82 aa8.14□□□□□ -1.11
ACTN1-219ENST00000556432 RAB4AP20338 218 aa8.14□□□□□ -1.11
ACTN1-219ENST00000556432 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
ACTN1-219ENST00000556432 C9orf129Q5T035 196 aaKnown RBP8.14□□□□□ -1.11
ACTN1-219ENST00000556432 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
ACTN1-219ENST00000556432 AMN1Q8IY45 258 aa8.14□□□□□ -1.11
ACTN1-219ENST00000556432 PACRGQ96M98 296 aaPredicted RBP8.14□□□□□ -1.11
ACTN1-219ENST00000556432 TIMM21Q9BVV7 248 aa8.14□□□□□ -1.11
ACTN1-219ENST00000556432 TMEM191AQ9H0A3 160 aa8.14□□□□□ -1.11
ACTN1-219ENST00000556432 FSIP2Q5CZC0 6907 aa8.13□□□□□ -1.11
ACTN1-219ENST00000556432 A0A1B0GUT8 65 aa8.13□□□□□ -1.11
ACTN1-219ENST00000556432 IFITM10A6NMD0 228 aa8.13□□□□□ -1.11
ACTN1-219ENST00000556432 HIGD1CA8MV81 97 aa8.13□□□□□ -1.11
ACTN1-219ENST00000556432 SUMO2P61956 95 aaKnown RBP8.13□□□□□ -1.11
ACTN1-219ENST00000556432 TGIF2-C20orf24A0A0A6YYL0 155 aa8.12□□□□□ -1.11
ACTN1-219ENST00000556432 TRBV30A0A0K0K1B3 111 aa8.12□□□□□ -1.11
ACTN1-219ENST00000556432 ADCYAP1P18509 176 aa8.12□□□□□ -1.11
ACTN1-219ENST00000556432 LINC01547P58512 204 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-219ENST00000556432 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
ACTN1-219ENST00000556432 LINC00173Q6ZV60 143 aa8.12□□□□□ -1.11
ACTN1-219ENST00000556432 COMMD7Q86VX2 200 aa8.12□□□□□ -1.11
ACTN1-219ENST00000556432 ANAPC11Q9NYG5 84 aa8.12□□□□□ -1.11
ACTN1-219ENST00000556432 PPP1R17O96001 155 aa8.11□□□□□ -1.11
ACTN1-219ENST00000556432 RPL39P62891 51 aaKnown RBP8.11□□□□□ -1.11
ACTN1-219ENST00000556432 HBBP68871 147 aa8.11□□□□□ -1.11
ACTN1-219ENST00000556432 LBHQ53QV2 105 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-219ENST00000556432 LINC00304Q8N9R0 145 aa8.11□□□□□ -1.11
ACTN1-219ENST00000556432 LINC00469Q8N7U9 141 aa8.1□□□□□ -1.11
ACTN1-219ENST00000556432 C22orf24Q9Y442 160 aa8.1□□□□□ -1.11
ACTN1-219ENST00000556432 PPP1R2P9O14990 202 aa8.09□□□□□ -1.11
ACTN1-219ENST00000556432 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
ACTN1-219ENST00000556432 NRACQ8N912 160 aa8.09□□□□□ -1.11
ACTN1-219ENST00000556432 MUC17Q685J3 4493 aa8.08□□□□□ -1.12
ACTN1-219ENST00000556432 BCE1O60756 84 aa8.08□□□□□ -1.12
ACTN1-219ENST00000556432 SPANXA1Q9NS26 97 aa8.08□□□□□ -1.12
ACTN1-219ENST00000556432 NAT8BQ9UHF3 227 aa8.08□□□□□ -1.12
ACTN1-219ENST00000556432 SMIM27A0A1W2PRY6 76 aa8.07□□□□□ -1.12
ACTN1-219ENST00000556432 KRTAP13-2Q52LG2 175 aa8.07□□□□□ -1.12
ACTN1-219ENST00000556432 LINC00242Q5T6M2 205 aa8.07□□□□□ -1.12
ACTN1-219ENST00000556432 UQCC3Q6UW78 93 aa8.07□□□□□ -1.12
ACTN1-219ENST00000556432 XAGE1AQ9HD64 81 aa8.07□□□□□ -1.12
ACTN1-219ENST00000556432 TMEM218A2RU14 115 aa8.06□□□□□ -1.12
ACTN1-219ENST00000556432 MRPS36P82909 103 aaKnown RBP8.06□□□□□ -1.12
ACTN1-219ENST00000556432 RIGQ13278 110 aa8.06□□□□□ -1.12
ACTN1-219ENST00000556432 MRPL54Q6P161 138 aaKnown RBP8.06□□□□□ -1.12
ACTN1-219ENST00000556432 FAM104AQ969W3 186 aa8.06□□□□□ -1.12
ACTN1-219ENST00000556432 PPDPFQ9H3Y8 114 aa8.06□□□□□ -1.12
ACTN1-219ENST00000556432 IGKV2D-26A0A0A0MRZ7 120 aa8.05□□□□□ -1.12
ACTN1-219ENST00000556432 LINC00862A6NCI5 91 aa8.05□□□□□ -1.12
ACTN1-219ENST00000556432 TCAPO15273 167 aa8.05□□□□□ -1.12
ACTN1-219ENST00000556432 PRSS2P07478 247 aa8.05□□□□□ -1.12
ACTN1-219ENST00000556432 MRPL55Q7Z7F7 128 aaKnown RBP8.05□□□□□ -1.12
ACTN1-219ENST00000556432 F8W036 122 aa8.04□□□□□ -1.12
ACTN1-219ENST00000556432 CKS1BP61024 79 aa8.04□□□□□ -1.12
ACTN1-219ENST00000556432 PNRC1Q12796 327 aaPredicted RBP8.04□□□□□ -1.12
ACTN1-219ENST00000556432 TOMM7Q9P0U1 55 aa8.04□□□□□ -1.12
ACTN1-219ENST00000556432 RPL37AP8A6NKH3 93 aa8.03□□□□□ -1.12
ACTN1-219ENST00000556432 UBE2AP49459 152 aa8.03□□□□□ -1.12
ACTN1-219ENST00000556432 MRPL51Q4U2R6 128 aaKnown RBP8.03□□□□□ -1.12
ACTN1-219ENST00000556432 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
ACTN1-219ENST00000556432 C20orf78Q9BR46 151 aa8.03□□□□□ -1.12
ACTN1-219ENST00000556432 A0A1B0GXF2 115 aa8.02□□□□□ -1.13
ACTN1-219ENST00000556432 TP73-AS1Q9UF72 201 aa8.02□□□□□ -1.13
ACTN1-219ENST00000556432 GAGE10A6NGK3 116 aa8.01□□□□□ -1.13
ACTN1-219ENST00000556432 MT-ND4LP03901 98 aa8.01□□□□□ -1.13
ACTN1-219ENST00000556432 CKS2P33552 79 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms