RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 HTN3P15516 51 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 FXYD2P54710 66 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 FXYD7P58549 80 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 RBMY1FQ15415 496 aaKnown RBP2.79□□□□□ -1.96
ATXN3-240ENST00000556339 RHOHQ15669 191 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 RRN3P1Q2M238 152 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 C18orf15Q96N68 181 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 HIST1H4GQ99525 98 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 KIR2DL4Q99706 377 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 APLNQ9ULZ1 77 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 CYSLTR1Q9Y271 337 aa2.79□□□□□ -1.96
ATXN3-240ENST00000556339 IGKV2D-26A0A0A0MRZ7 120 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 A0A0J9YX75 114 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 TRBV27A0A0K0K1C4 114 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 H3BMG7 143 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 CIDEAO60543 219 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 DUSP14O95147 198 aaKnown RBP2.78□□□□□ -1.96
ATXN3-240ENST00000556339 P0DMU3 169 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 FAM231AP0DMU4 169 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 FAM231CP0DMU5 169 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 UBE2D1P51668 147 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 POLR2KP53803 58 aaKnown RBP2.78□□□□□ -1.96
ATXN3-240ENST00000556339 PMVKQ15126 192 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 FAM159AQ6UWV7 190 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 C2orf66Q6UXQ4 117 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 TRPT1Q86TN4 253 aaKnown RBP2.78□□□□□ -1.96
ATXN3-240ENST00000556339 BAALCQ8WXS3 180 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 RASL10AQ92737 203 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 PTH2Q96A98 100 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 LINC01600Q96MT4 127 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 SPANXA1Q9NS26 97 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
ATXN3-240ENST00000556339 KIF25-AS1Q9Y6Z4 181 aa2.78□□□□□ -1.96
ATXN3-240ENST00000556339 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-240ENST00000556339 SMIM9A6NGZ8 99 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 IGIPA6NJ69 53 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 TMEM262E9PQX1 116 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 H3BMM0 161 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 H3BVH4 76 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 RNASE3P12724 160 aaKnown RBP2.77□□□□□ -1.97
ATXN3-240ENST00000556339 GATA1P15976 413 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-240ENST00000556339 LINC00315P59091 139 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 DAD1P61803 113 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 LINC00336Q6ZUF6 198 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 RNF182Q8N6D2 247 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 MAPKAPK5-AS1Q8N8E1 139 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 SLC25A29Q8N8R3 303 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 Q8NAQ8 132 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 DCANP1Q8TF63 244 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 PLEKHB2Q96CS7 222 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 PRADC1Q9BSG0 188 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 PYGO1Q9Y3Y4 419 aa2.77□□□□□ -1.97
ATXN3-240ENST00000556339 KMT2AQ03164 3969 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 TEX48A0A1B0GUV7 120 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 A0A1B0GV72 72 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 SDHAF1A6NFY7 115 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 ZNF815PA8K554 130 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 TMEM238C9JI98 176 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 LEPROTO15243 131 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 GIG44P09565 113 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-240ENST00000556339 HTN1P15515 57 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 RNASE4P34096 147 aaKnown RBP2.76□□□□□ -1.97
ATXN3-240ENST00000556339 DEFB1P60022 68 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 SEC61BP60468 96 aaKnown RBP2.76□□□□□ -1.97
ATXN3-240ENST00000556339 UBE2D3P61077 147 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 UBE2D2P62837 147 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 RPL24P83731 157 aaKnown RBP2.76□□□□□ -1.97
ATXN3-240ENST00000556339 SRSF9Q13242 221 aaKnown RBP eCLIP2.76□□□□□ -1.97
ATXN3-240ENST00000556339 SCGB1D4Q6XE38 83 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 ZFP2Q6ZN57 461 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 C14orf178Q8N769 122 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-240ENST00000556339 C9orf85Q96MD7 179 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 LINC00467Q9BRT7 94 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 MRPL16Q9NX20 251 aaKnown RBP2.76□□□□□ -1.97
ATXN3-240ENST00000556339 PRO0461Q9UI25 63 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 CELA1Q9UNI1 258 aa2.76□□□□□ -1.97
ATXN3-240ENST00000556339 DNAH10Q8IVF4 4471 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 IGHV1OR15-1A0A075B7D0 117 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 TRAV26-2A0A0B4J265 109 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 A0A0B4J2C4 111 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 A0A0J9YY99 117 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 A8MTW9 85 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 F5H768 121 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 F6UB75 175 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 I3L3M4 83 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 CRYGDP07320 174 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 MGPP08493 103 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 DEFB130BP0DP73 79 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 DEFB130AP0DP74 79 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 SMAGPQ0VAQ4 97 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 PRR9Q5T870 116 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 C1orf134Q5TEV5 83 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 FAM222AQ5U5X8 452 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 CFAP126Q5VTH2 177 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 C10orf126Q8N4M7 172 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 CSNK1G2-AS1Q8NCQ2 148 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 271.6 ms