RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 HBDP02042 147 aa13.13□□□□□ -0.31
RCCD1-205ENST00000556333 UBE2D1P51668 147 aa13.13□□□□□ -0.31
RCCD1-205ENST00000556333 KRTAP4-5Q9BYR2 181 aa13.13□□□□□ -0.31
RCCD1-205ENST00000556333 GVQW2A0A096LPI5 108 aaPredicted RBP13.12□□□□□ -0.31
RCCD1-205ENST00000556333 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.12□□□□□ -0.31
RCCD1-205ENST00000556333 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.12□□□□□ -0.31
RCCD1-205ENST00000556333 ZNF561-AS1K7EIQ3 104 aa13.12□□□□□ -0.31
RCCD1-205ENST00000556333 APOMO95445 188 aa13.12□□□□□ -0.31
RCCD1-205ENST00000556333 LINC00242Q5T6M2 205 aa13.12□□□□□ -0.31
RCCD1-205ENST00000556333 CHCHD1Q96BP2 118 aaKnown RBP13.12□□□□□ -0.31
RCCD1-205ENST00000556333 A0A096LNJ9 63 aa13.11□□□□□ -0.31
RCCD1-205ENST00000556333 S100A1P23297 94 aa13.11□□□□□ -0.31
RCCD1-205ENST00000556333 LINC00526Q96FQ7 95 aa13.11□□□□□ -0.31
RCCD1-205ENST00000556333 IGHV3OR16-9A0A0B4J2B5 98 aa13.1□□□□□ -0.31
RCCD1-205ENST00000556333 ATP6V1G1O75348 118 aa13.1□□□□□ -0.31
RCCD1-205ENST00000556333 CDK2AP2O75956 126 aa13.1□□□□□ -0.31
RCCD1-205ENST00000556333 COX6A2Q02221 97 aa13.1□□□□□ -0.31
RCCD1-205ENST00000556333 NDUFA6P56556 154 aa13.09□□□□□ -0.31
RCCD1-205ENST00000556333 CNBPP62633 177 aaKnown RBP13.09□□□□□ -0.31
RCCD1-205ENST00000556333 C9orf163Q8N9P6 203 aa13.09□□□□□ -0.31
RCCD1-205ENST00000556333 DYNC1H1Q14204 4646 aaKnown RBP13.08□□□□□ -0.32
RCCD1-205ENST00000556333 HSBP1O75506 76 aa13.08□□□□□ -0.32
RCCD1-205ENST00000556333 SLPIP03973 132 aa13.08□□□□□ -0.32
RCCD1-205ENST00000556333 SEC11AP67812 179 aa13.08□□□□□ -0.32
RCCD1-205ENST00000556333 GEMIN7Q9H840 131 aaKnown RBP13.08□□□□□ -0.32
RCCD1-205ENST00000556333 HERVK_113P63121 156 aa13.07□□□□□ -0.32
RCCD1-205ENST00000556333 PMVKQ15126 192 aa13.07□□□□□ -0.32
RCCD1-205ENST00000556333 ORAOV1Q8WV07 137 aa13.07□□□□□ -0.32
RCCD1-205ENST00000556333 DNAH5Q8TE73 4624 aa13.06□□□□□ -0.32
RCCD1-205ENST00000556333 IGLV4-69A0A075B6H9 119 aa13.06□□□□□ -0.32
RCCD1-205ENST00000556333 A0A0J9YXV3 536 aa13.06□□□□□ -0.32
RCCD1-205ENST00000556333 ATP5LO75964 103 aa13.06□□□□□ -0.32
RCCD1-205ENST00000556333 PDZD11Q5EBL8 140 aa13.06□□□□□ -0.32
RCCD1-205ENST00000556333 IGHV3-64A0A075B6Q5 118 aa13.05□□□□□ -0.32
RCCD1-205ENST00000556333 A0A087WZ39 114 aa13.05□□□□□ -0.32
RCCD1-205ENST00000556333 HAMPP81172 84 aa13.05□□□□□ -0.32
RCCD1-205ENST00000556333 SPAG11BQ08648 103 aa13.05□□□□□ -0.32
RCCD1-205ENST00000556333 FAM19A3Q7Z5A8 133 aa13.05□□□□□ -0.32
RCCD1-205ENST00000556333 CST9LQ9H4G1 147 aa13.05□□□□□ -0.32
RCCD1-205ENST00000556333 FAM30AQ9NZY2 134 aa13.05□□□□□ -0.32
RCCD1-205ENST00000556333 SERF1AO75920 110 aa13.04□□□□□ -0.32
RCCD1-205ENST00000556333 FAM19A2Q8N3H0 131 aa13.04□□□□□ -0.32
RCCD1-205ENST00000556333 OR10D4PQ8NGN7 298 aa13.04□□□□□ -0.32
RCCD1-205ENST00000556333 CARD19Q96LW7 228 aa13.04□□□□□ -0.32
RCCD1-205ENST00000556333 CAMK2N2Q96S95 79 aa13.04□□□□□ -0.32
RCCD1-205ENST00000556333 SYCNQ0VAF6 134 aa13.03□□□□□ -0.32
RCCD1-205ENST00000556333 XGP55808 180 aa13.02□□□□□ -0.33
RCCD1-205ENST00000556333 PACRGQ96M98 296 aaPredicted RBP13.02□□□□□ -0.33
RCCD1-205ENST00000556333 TINCRA0A1B0GVN0 87 aa13.01□□□□□ -0.33
RCCD1-205ENST00000556333 LINC00469Q8N7U9 141 aa13.01□□□□□ -0.33
RCCD1-205ENST00000556333 CDKN2A-AS1Q9UH64 79 aa13.01□□□□□ -0.33
RCCD1-205ENST00000556333 SDIM1Q6ZPB5 146 aa13□□□□□ -0.33
RCCD1-205ENST00000556333 Q6ZSA8 131 aa13□□□□□ -0.33
RCCD1-205ENST00000556333 IFI27L1Q96BM0 104 aa13□□□□□ -0.33
RCCD1-205ENST00000556333 Q6ZRU5 148 aa12.99□□□□□ -0.33
RCCD1-205ENST00000556333 LINC01561Q8N1V8 128 aa12.99□□□□□ -0.33
RCCD1-205ENST00000556333 C2orf48Q96LS8 159 aa12.99□□□□□ -0.33
RCCD1-205ENST00000556333 TOMM7Q9P0U1 55 aa12.99□□□□□ -0.33
RCCD1-205ENST00000556333 LRP1BQ9NZR2 4599 aa12.99□□□□□ -0.33
RCCD1-205ENST00000556333 HIST1H2BKO60814 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST1H2BJP06899 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 PRSS2P07478 247 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST1H2BOP23527 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST1H2BBP33778 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST1H2BDP58876 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 LINC00310P59036 64 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST1H2BCP62807 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST2H2BEQ16778 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST1H2BHQ93079 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST1H2BNQ99877 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 HIST1H2BMQ99879 126 aa12.98□□□□□ -0.33
RCCD1-205ENST00000556333 NDUFA1O15239 70 aa12.97□□□□□ -0.33
RCCD1-205ENST00000556333 NUPR1O60356 82 aa12.97□□□□□ -0.33
RCCD1-205ENST00000556333 DPH3Q96FX2 82 aa12.97□□□□□ -0.33
RCCD1-205ENST00000556333 LEPROTL1O95214 131 aa12.96□□□□□ -0.33
RCCD1-205ENST00000556333 CHAC1Q9BUX1 264 aa12.96□□□□□ -0.33
RCCD1-205ENST00000556333 SCXQ7RTU7 201 aa12.95□□□□□ -0.34
RCCD1-205ENST00000556333 PKIGQ9Y2B9 76 aa12.95□□□□□ -0.34
RCCD1-205ENST00000556333 CHTOPQ9Y3Y2 248 aaKnown RBP12.95□□□□□ -0.34
RCCD1-205ENST00000556333 HSPG2P98160 4391 aa12.94□□□□□ -0.34
RCCD1-205ENST00000556333 IGKV2-24A0A0C4DH68 120 aa12.94□□□□□ -0.34
RCCD1-205ENST00000556333 F8WDY8 70 aa12.94□□□□□ -0.34
RCCD1-205ENST00000556333 H0Y8G0 127 aa12.94□□□□□ -0.34
RCCD1-205ENST00000556333 H3BRM9 83 aa12.94□□□□□ -0.34
RCCD1-205ENST00000556333 SMR3BP02814 79 aaPredicted RBP12.94□□□□□ -0.34
RCCD1-205ENST00000556333 IGLC3P0DOY3 106 aa12.94□□□□□ -0.34
RCCD1-205ENST00000556333 FABP4P15090 132 aa12.94□□□□□ -0.34
RCCD1-205ENST00000556333 C6orf226Q5I0X4 101 aa12.94□□□□□ -0.34
RCCD1-205ENST00000556333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.94□□□□□ -0.34
RCCD1-205ENST00000556333 IGLV5-45A0A087WSX0 123 aa12.93□□□□□ -0.34
RCCD1-205ENST00000556333 SPINK8P0C7L1 97 aa12.93□□□□□ -0.34
RCCD1-205ENST00000556333 CHTF8P0CG12 524 aa12.93□□□□□ -0.34
RCCD1-205ENST00000556333 KIAA0087Q14695 138 aa12.93□□□□□ -0.34
RCCD1-205ENST00000556333 UNQ6190/PRO20217Q6UXQ8 127 aa12.93□□□□□ -0.34
RCCD1-205ENST00000556333 CKS1BP61024 79 aa12.92□□□□□ -0.34
RCCD1-205ENST00000556333 Q8IZM0 81 aa12.92□□□□□ -0.34
RCCD1-205ENST00000556333 HSPB8Q9UJY1 196 aa12.92□□□□□ -0.34
RCCD1-205ENST00000556333 TRAV12-1A0A0B4J245 112 aa12.91□□□□□ -0.34
RCCD1-205ENST00000556333 LOC107984640A0A0U1RRK4 108 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms