RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 Q0VG73 95 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
ATXN3-238ENST00000556288 C14orf177Q52M58 125 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 MPV17L2Q567V2 206 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 NTM-AS1Q6ZSK4 140 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 LINC00269Q8N2A0 174 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 TMEM101Q96IK0 257 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
ATXN3-238ENST00000556288 A0A087WTM6 91 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 A0A1B0GVY2 172 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 A0A1B0GW15 77 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 PPP1R17O96001 155 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 LINC00694P0DN24 101 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 RBX1P62877 108 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 HBBP68871 147 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 FAM104BQ5XKR9 115 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 FRZBQ92765 325 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 RNF185Q96GF1 192 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 PRAC1Q96KF2 57 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 CNFNQ9BYD5 112 aa3.09□□□□□ -1.91
ATXN3-238ENST00000556288 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
ATXN3-238ENST00000556288 IGLV4-60A0A075B6I1 120 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 D6R8Y8 96 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 ESDP10768 282 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 DDTP30046 118 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 REG3AQ06141 175 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 ENHOQ6UWT2 76 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 TMEM136Q6ZRR5 245 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 KIR2DL4Q99706 377 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 PYGO1Q9Y3Y4 419 aa3.08□□□□□ -1.92
ATXN3-238ENST00000556288 PLECQ15149 4684 aaKnown RBP3.08□□□□□ -1.92
ATXN3-238ENST00000556288 KMT2CQ8NEZ4 4911 aaKnown RBP3.08□□□□□ -1.92
ATXN3-238ENST00000556288 TCAPO15273 167 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 MT-ND6P03923 174 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 FGF6P10767 208 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 FABP4P15090 132 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 LAGE3Q14657 143 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 SS18Q15532 418 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 MIAQ16674 131 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
ATXN3-238ENST00000556288 Q6ZRN7 208 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-238ENST00000556288 ORMDL3Q8N138 153 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 C14orf144Q96I85 54 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 TMEM70Q9BUB7 260 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 CHCHD7Q9BUK0 85 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 HYDINQ4G0P3 5121 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 KMT2AQ03164 3969 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 RYR3Q15413 4870 aa3.07□□□□□ -1.92
ATXN3-238ENST00000556288 A0A087X002 238 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 TRBV6-5A0A0K0K1A5 114 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 NPYP01303 97 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 PPBPP02775 128 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 POLR2KP53803 58 aaKnown RBP3.06□□□□□ -1.92
ATXN3-238ENST00000556288 SMAGPQ0VAQ4 97 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 LINC01620Q4KN68 170 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 ADAMTSL4-AS1Q5T5F5 129 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 ZC2HC1BQ5TFG8 222 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 ATP5L2Q7Z4Y8 100 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 Q8N814 137 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 C20orf203Q8NBC4 194 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 C20orf78Q9BR46 151 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
ATXN3-238ENST00000556288 TRAV13-1A0A0B4J241 112 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 TRAV8-4A0A0B4J246 113 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 A0A1B0GXF2 115 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 H7C423 109 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 M0R143 59 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 XCL1P47992 114 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 RPL39P62891 51 aaKnown RBP3.05□□□□□ -1.92
ATXN3-238ENST00000556288 HAMPP81172 84 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 WFDC2Q14508 124 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 ZNF664Q8N3J9 261 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 CHCHD10Q8WYQ3 142 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-238ENST00000556288 OPRPNQ99935 248 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-238ENST00000556288 VPS13DQ5THJ4 4388 aa3.05□□□□□ -1.92
ATXN3-238ENST00000556288 LINC00959A0A1B0GUT2 108 aa3.04□□□□□ -1.92
ATXN3-238ENST00000556288 C20orf202A1L168 122 aa3.04□□□□□ -1.92
ATXN3-238ENST00000556288 CCL25O15444 150 aa3.04□□□□□ -1.92
ATXN3-238ENST00000556288 SMR3BP02814 79 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-238ENST00000556288 ZNF25P17030 456 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-238ENST00000556288 IFI27P40305 119 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-238ENST00000556288 KRTAP10-1P60331 282 aa3.04□□□□□ -1.92
ATXN3-238ENST00000556288 HIGD2BQ4VC39 106 aa3.04□□□□□ -1.92
ATXN3-238ENST00000556288 Q8N8P6 123 aa3.04□□□□□ -1.92
ATXN3-238ENST00000556288 SMIM2Q9BVW6 85 aa3.04□□□□□ -1.92
ATXN3-238ENST00000556288 DNAH1Q9P2D7 4330 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms