RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 RPL37AP61513 92 aaKnown RBP4.03□□□□□ -1.76
TMEM260-209ENST00000556079 DGAT2L7PQ6IED9 249 aa4.03□□□□□ -1.76
TMEM260-209ENST00000556079 C5orf38Q86SI9 138 aa4.03□□□□□ -1.76
TMEM260-209ENST00000556079 SPACA4Q8TDM5 124 aa4.03□□□□□ -1.76
TMEM260-209ENST00000556079 TMEM101Q96IK0 257 aa4.03□□□□□ -1.76
TMEM260-209ENST00000556079 BTF3L4Q96K17 158 aa4.03□□□□□ -1.76
TMEM260-209ENST00000556079 H7C423 109 aa4.02□□□□□ -1.77
TMEM260-209ENST00000556079 ZNF25P17030 456 aaPredicted RBP4.02□□□□□ -1.77
TMEM260-209ENST00000556079 CIRBPQ14011 172 aaKnown RBP4.02□□□□□ -1.77
TMEM260-209ENST00000556079 MAJINQ3KP22 176 aa4.02□□□□□ -1.77
TMEM260-209ENST00000556079 KIAA1644Q3SXP7 199 aa4.02□□□□□ -1.77
TMEM260-209ENST00000556079 CLLU1Q5K131 121 aa4.02□□□□□ -1.77
TMEM260-209ENST00000556079 Q6ZRU5 148 aa4.02□□□□□ -1.77
TMEM260-209ENST00000556079 PRELID3AQ96N28 172 aa4.02□□□□□ -1.77
TMEM260-209ENST00000556079 IGLV4-69A0A075B6H9 119 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 TRBV24-1A0A075B6N3 115 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 C9orf118A6NHY6 69 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 PHOX2AO14813 284 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 RAB14P61106 215 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 SS18Q15532 418 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 TMEM136Q6ZRR5 245 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 DPH3Q96FX2 82 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 IMMP2LQ96T52 175 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 C20orf78Q9BR46 151 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 SMDT1Q9H4I9 107 aa4.01□□□□□ -1.77
TMEM260-209ENST00000556079 IGHV1-58A0A0C4DH39 117 aa4□□□□□ -1.77
TMEM260-209ENST00000556079 COX7A2LO14548 114 aa4□□□□□ -1.77
TMEM260-209ENST00000556079 C10orf25Q5T742 122 aa4□□□□□ -1.77
TMEM260-209ENST00000556079 CD164L2Q6UWJ8 174 aa4□□□□□ -1.77
TMEM260-209ENST00000556079 LINC00173Q6ZV60 143 aa4□□□□□ -1.77
TMEM260-209ENST00000556079 COMMD7Q86VX2 200 aa4□□□□□ -1.77
TMEM260-209ENST00000556079 CARD19Q96LW7 228 aa4□□□□□ -1.77
TMEM260-209ENST00000556079 KIR2DL4Q99706 377 aa4□□□□□ -1.77
TMEM260-209ENST00000556079 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
TMEM260-209ENST00000556079 IGLV4-3A0A075B6K6 122 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.99□□□□□ -1.77
TMEM260-209ENST00000556079 A0A1B0GW15 77 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 A0A1W2PNN7 141 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 TMEM218A2RU14 115 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 LINC00862A6NCI5 91 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 IFITM10A6NMD0 228 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 F8W036 122 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 PPP1R2P9O14990 202 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 OXTP01178 125 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 MT-ND4LP03901 98 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 RPL32P62910 135 aaKnown RBP3.99□□□□□ -1.77
TMEM260-209ENST00000556079 SPAG11BQ08648 103 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 SYCNQ0VAF6 134 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 GAGE2BQ13066 116 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 ATP5L2Q7Z4Y8 100 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 ORMDL3Q8N138 153 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 STPG4Q8N801 248 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
TMEM260-209ENST00000556079 LPAP08519 4548 aa3.98□□□□□ -1.77
TMEM260-209ENST00000556079 FAM168BA1KXE4 195 aa3.98□□□□□ -1.77
TMEM260-209ENST00000556079 GAGE10A6NGK3 116 aa3.98□□□□□ -1.77
TMEM260-209ENST00000556079 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.98□□□□□ -1.77
TMEM260-209ENST00000556079 S100A8P05109 93 aa3.98□□□□□ -1.77
TMEM260-209ENST00000556079 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
TMEM260-209ENST00000556079 IFI27P40305 119 aaPredicted RBP3.98□□□□□ -1.77
TMEM260-209ENST00000556079 KRTAP11-1Q8IUC1 163 aa3.98□□□□□ -1.77
TMEM260-209ENST00000556079 ORAOV1Q8WV07 137 aa3.98□□□□□ -1.77
TMEM260-209ENST00000556079 TIMM21Q9BVV7 248 aa3.98□□□□□ -1.77
TMEM260-209ENST00000556079 CSDC2Q9Y534 153 aaKnown RBP3.98□□□□□ -1.77
TMEM260-209ENST00000556079 IGHV3OR16-9A0A0B4J2B5 98 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 C1orf196B1AJZ1 125 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 PPP1R17O96001 155 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 PRR3P79522 188 aaKnown RBP3.97□□□□□ -1.77
TMEM260-209ENST00000556079 RPL18AQ02543 176 aaKnown RBP3.97□□□□□ -1.77
TMEM260-209ENST00000556079 PNRC1Q12796 327 aaPredicted RBP3.97□□□□□ -1.77
TMEM260-209ENST00000556079 LINC00242Q5T6M2 205 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 C2orf82Q6UX34 121 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 UNQ6190/PRO20217Q6UXQ8 127 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 KRTAP7-1Q8IUC3 87 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 Q8N8P6 123 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 MAP1LC3AQ9H492 121 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 SPANXA1Q9NS26 97 aa3.97□□□□□ -1.77
TMEM260-209ENST00000556079 TGIF2-C20orf24A0A0A6YYL0 155 aa3.96□□□□□ -1.78
TMEM260-209ENST00000556079 PPBPP02775 128 aa3.96□□□□□ -1.78
TMEM260-209ENST00000556079 RAB5AP20339 215 aa3.96□□□□□ -1.78
TMEM260-209ENST00000556079 MRPS36P82909 103 aaKnown RBP3.96□□□□□ -1.78
TMEM260-209ENST00000556079 KIAA0087Q14695 138 aa3.96□□□□□ -1.78
TMEM260-209ENST00000556079 C9orf116Q5BN46 136 aaPredicted RBP3.96□□□□□ -1.78
TMEM260-209ENST00000556079 C2orf66Q6UXQ4 117 aa3.96□□□□□ -1.78
TMEM260-209ENST00000556079 PHF5AQ7RTV0 110 aaKnown RBP3.96□□□□□ -1.78
TMEM260-209ENST00000556079 CTDSP1Q9GZU7 261 aa3.96□□□□□ -1.78
TMEM260-209ENST00000556079 C6orf48Q9UBA6 75 aa3.96□□□□□ -1.78
TMEM260-209ENST00000556079 LOC107984640A0A0U1RRK4 108 aa3.95□□□□□ -1.78
TMEM260-209ENST00000556079 IGIPA6NJ69 53 aa3.95□□□□□ -1.78
TMEM260-209ENST00000556079 B5MCH6 92 aa3.95□□□□□ -1.78
TMEM260-209ENST00000556079 UBE2D1P51668 147 aa3.95□□□□□ -1.78
TMEM260-209ENST00000556079 UQCC3Q6UW78 93 aa3.95□□□□□ -1.78
TMEM260-209ENST00000556079 TMEM18Q96B42 140 aa3.95□□□□□ -1.78
TMEM260-209ENST00000556079 TMEM141Q96I45 108 aa3.95□□□□□ -1.78
TMEM260-209ENST00000556079 APOMO95445 188 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 GAGE2EQ4V326 116 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 C10orf91Q5T1B1 145 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 Q6ZRP5 223 aa3.94□□□□□ -1.78
TMEM260-209ENST00000556079 FAM19A5Q7Z5A7 132 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms