RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 LINC00526Q96FQ7 95 aa4.82□□□□□ -1.64
PTCSC3-201ENST00000556013 IMMP2LQ96T52 175 aa4.82□□□□□ -1.64
PTCSC3-201ENST00000556013 SPANXA1Q9NS26 97 aa4.82□□□□□ -1.64
PTCSC3-201ENST00000556013 A0A1W2PNN7 141 aa4.81□□□□□ -1.64
PTCSC3-201ENST00000556013 PRSS47A8MTI9 375 aa4.81□□□□□ -1.64
PTCSC3-201ENST00000556013 SMKR1H3BMG3 65 aa4.81□□□□□ -1.64
PTCSC3-201ENST00000556013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.81□□□□□ -1.64
PTCSC3-201ENST00000556013 TNFRSF6BO95407 300 aa4.81□□□□□ -1.64
PTCSC3-201ENST00000556013 C5orf38Q86SI9 138 aa4.81□□□□□ -1.64
PTCSC3-201ENST00000556013 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
PTCSC3-201ENST00000556013 HBBP68871 147 aa4.8□□□□□ -1.64
PTCSC3-201ENST00000556013 ADIRFQ15847 76 aa4.8□□□□□ -1.64
PTCSC3-201ENST00000556013 C9orf116Q5BN46 136 aaPredicted RBP4.8□□□□□ -1.64
PTCSC3-201ENST00000556013 ATP5L2Q7Z4Y8 100 aa4.8□□□□□ -1.64
PTCSC3-201ENST00000556013 LINC01561Q8N1V8 128 aa4.8□□□□□ -1.64
PTCSC3-201ENST00000556013 SMIM2Q9BVW6 85 aa4.8□□□□□ -1.64
PTCSC3-201ENST00000556013 A0A1B0GXF2 115 aa4.79□□□□□ -1.64
PTCSC3-201ENST00000556013 NDUFA1O15239 70 aa4.79□□□□□ -1.64
PTCSC3-201ENST00000556013 RAB5AP20339 215 aa4.79□□□□□ -1.64
PTCSC3-201ENST00000556013 SPAG11BQ08648 103 aa4.79□□□□□ -1.64
PTCSC3-201ENST00000556013 ODF1Q14990 250 aa4.79□□□□□ -1.64
PTCSC3-201ENST00000556013 TMEM136Q6ZRR5 245 aa4.79□□□□□ -1.64
PTCSC3-201ENST00000556013 Q6ZUT4 128 aa4.79□□□□□ -1.64
PTCSC3-201ENST00000556013 FAM104AQ969W3 186 aa4.79□□□□□ -1.64
PTCSC3-201ENST00000556013 LAMTOR2Q9Y2Q5 125 aa4.79□□□□□ -1.64
PTCSC3-201ENST00000556013 A0A087WZ39 114 aa4.78□□□□□ -1.64
PTCSC3-201ENST00000556013 C9JQL5 133 aa4.78□□□□□ -1.64
PTCSC3-201ENST00000556013 D6R8Y8 96 aa4.78□□□□□ -1.64
PTCSC3-201ENST00000556013 K7EMI3 77 aa4.78□□□□□ -1.64
PTCSC3-201ENST00000556013 NPSP0C0P6 89 aa4.78□□□□□ -1.64
PTCSC3-201ENST00000556013 IFI27P40305 119 aaPredicted RBP4.78□□□□□ -1.64
PTCSC3-201ENST00000556013 ORMDL3Q8N138 153 aa4.78□□□□□ -1.64
PTCSC3-201ENST00000556013 PSORS1C2Q9UIG4 136 aa4.78□□□□□ -1.64
PTCSC3-201ENST00000556013 TGIF2-C20orf24A0A0A6YYL0 155 aa4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 TRBV30A0A0K0K1B3 111 aa4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 NPYP01303 97 aa4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 MT-ND6P03923 174 aa4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 RPL39P62891 51 aaKnown RBP4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 IFITM2Q01629 132 aa4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 RPL18AQ02543 176 aaKnown RBP4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 KIAA0087Q14695 138 aa4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 RNASE13Q5GAN3 156 aaKnown RBP4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 SLC7A5P1Q8MH63 180 aa4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 ORAOV1Q8WV07 137 aa4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 DIRC1Q969H9 104 aa4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 OPRPNQ99935 248 aaPredicted RBP4.77□□□□□ -1.65
PTCSC3-201ENST00000556013 IFITM10A6NMD0 228 aa4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 IGLV7-43P04211 117 aa4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 G0S2P27469 103 aa4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 SRSF3P84103 164 aaKnown RBP4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 PNRC1Q12796 327 aaPredicted RBP4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 C1orf137Q5JT78 98 aa4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 LINC00242Q5T6M2 205 aa4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 MRPL54Q6P161 138 aaKnown RBP4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 ANAPC16Q96DE5 110 aa4.76□□□□□ -1.65
PTCSC3-201ENST00000556013 UNQ6190/PRO20217Q6UXQ8 127 aa4.75□□□□□ -1.65
PTCSC3-201ENST00000556013 FAM19A3Q7Z5A8 133 aa4.75□□□□□ -1.65
PTCSC3-201ENST00000556013 TMEM141Q96I45 108 aa4.75□□□□□ -1.65
PTCSC3-201ENST00000556013 PRELID3AQ96N28 172 aa4.75□□□□□ -1.65
PTCSC3-201ENST00000556013 C6orf48Q9UBA6 75 aa4.75□□□□□ -1.65
PTCSC3-201ENST00000556013 IGLV1-50A0A075B6I6 118 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 IGLV4-3A0A075B6K6 122 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 NDUFC2-KCTD14E9PQ53 114 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 SEC11AP67812 179 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 ORMDL2Q53FV1 153 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 C10orf25Q5T742 122 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 Q6ZN92 141 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 TEX43Q6ZNM6 134 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 Q8N8P6 123 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 PACRGQ96M98 296 aaPredicted RBP4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 AMELXQ99217 191 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 C2orf88Q9BSF0 95 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 MAP1LC3AQ9H492 121 aa4.74□□□□□ -1.65
PTCSC3-201ENST00000556013 H0Y9J4 135 aa4.73□□□□□ -1.65
PTCSC3-201ENST00000556013 MT-ND4LP03901 98 aa4.73□□□□□ -1.65
PTCSC3-201ENST00000556013 UBE2D1P51668 147 aa4.73□□□□□ -1.65
PTCSC3-201ENST00000556013 PAPPA-AS1Q5QFB9 102 aa4.73□□□□□ -1.65
PTCSC3-201ENST00000556013 C2orf66Q6UXQ4 117 aa4.73□□□□□ -1.65
PTCSC3-201ENST00000556013 VCX2Q9H322 139 aa4.73□□□□□ -1.65
PTCSC3-201ENST00000556013 CYSLTR1Q9Y271 337 aa4.73□□□□□ -1.65
PTCSC3-201ENST00000556013 LINC01549A6NIU2 74 aa4.72□□□□□ -1.65
PTCSC3-201ENST00000556013 IGIPA6NJ69 53 aa4.72□□□□□ -1.65
PTCSC3-201ENST00000556013 GAGE2EQ4V326 116 aa4.72□□□□□ -1.65
PTCSC3-201ENST00000556013 NXT2Q9NPJ8 142 aaKnown RBP4.72□□□□□ -1.65
PTCSC3-201ENST00000556013 GAGE2DQ9UEU5 116 aa4.72□□□□□ -1.65
PTCSC3-201ENST00000556013 CARHSP1Q9Y2V2 147 aaKnown RBP4.72□□□□□ -1.65
PTCSC3-201ENST00000556013 NUPR1O60356 82 aa4.71□□□□□ -1.66
PTCSC3-201ENST00000556013 PRSS2P07478 247 aa4.71□□□□□ -1.66
PTCSC3-201ENST00000556013 RPL13AP40429 203 aaKnown RBP4.71□□□□□ -1.66
PTCSC3-201ENST00000556013 HERVK_113P63121 156 aa4.71□□□□□ -1.66
PTCSC3-201ENST00000556013 LBHQ53QV2 105 aaPredicted RBP4.71□□□□□ -1.66
PTCSC3-201ENST00000556013 C6orf226Q5I0X4 101 aa4.71□□□□□ -1.66
PTCSC3-201ENST00000556013 KRTAP7-1Q8IUC3 87 aa4.71□□□□□ -1.66
PTCSC3-201ENST00000556013 Q8IZM0 81 aa4.71□□□□□ -1.66
PTCSC3-201ENST00000556013 TIMM17AQ99595 171 aa4.71□□□□□ -1.66
PTCSC3-201ENST00000556013 RNF213Q63HN8 5207 aa4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 LOC389332A0A1B0GUA5 103 aa4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 FAM168BA1KXE4 195 aa4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 M0QXV9 152 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms