RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 MT1HL1P0DM35 61 aa9.64□□□□□ -0.87
SNX6-205ENST00000555648 IFI27P40305 119 aaPredicted RBP9.64□□□□□ -0.87
SNX6-205ENST00000555648 RAB14P61106 215 aa9.64□□□□□ -0.87
SNX6-205ENST00000555648 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
SNX6-205ENST00000555648 REG3GQ6UW15 175 aa9.64□□□□□ -0.87
SNX6-205ENST00000555648 ORAOV1Q8WV07 137 aa9.64□□□□□ -0.87
SNX6-205ENST00000555648 PRELID3AQ96N28 172 aa9.64□□□□□ -0.87
SNX6-205ENST00000555648 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
SNX6-205ENST00000555648 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
SNX6-205ENST00000555648 F8WDY8 70 aa9.62□□□□□ -0.87
SNX6-205ENST00000555648 MT-ND4LP03901 98 aa9.62□□□□□ -0.87
SNX6-205ENST00000555648 PNRC1Q12796 327 aaPredicted RBP9.62□□□□□ -0.87
SNX6-205ENST00000555648 OPRPNQ99935 248 aaPredicted RBP9.62□□□□□ -0.87
SNX6-205ENST00000555648 LRP1Q07954 4544 aaKnown RBP9.62□□□□□ -0.87
SNX6-205ENST00000555648 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.61□□□□□ -0.87
SNX6-205ENST00000555648 NDUFA1O15239 70 aa9.61□□□□□ -0.87
SNX6-205ENST00000555648 RNF151Q2KHN1 245 aa9.61□□□□□ -0.87
SNX6-205ENST00000555648 IMMP2LQ96T52 175 aa9.61□□□□□ -0.87
SNX6-205ENST00000555648 MAP1LC3AQ9H492 121 aa9.61□□□□□ -0.87
SNX6-205ENST00000555648 IGHV3OR16-9A0A0B4J2B5 98 aa9.6□□□□□ -0.87
SNX6-205ENST00000555648 A0A0J9YXV3 536 aa9.6□□□□□ -0.87
SNX6-205ENST00000555648 LOC389332A0A1B0GUA5 103 aa9.6□□□□□ -0.87
SNX6-205ENST00000555648 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
SNX6-205ENST00000555648 ANAPC16Q96DE5 110 aa9.6□□□□□ -0.87
SNX6-205ENST00000555648 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
SNX6-205ENST00000555648 MRPL35Q9NZE8 188 aaKnown RBP9.6□□□□□ -0.87
SNX6-205ENST00000555648 LAMTOR2Q9Y2Q5 125 aa9.6□□□□□ -0.87
SNX6-205ENST00000555648 A0A1W2PNN7 141 aa9.59□□□□□ -0.87
SNX6-205ENST00000555648 MT-ND6P03923 174 aa9.59□□□□□ -0.87
SNX6-205ENST00000555648 C2orf88Q9BSF0 95 aa9.59□□□□□ -0.87
SNX6-205ENST00000555648 Q6ZN92 141 aa9.58□□□□□ -0.88
SNX6-205ENST00000555648 TEX43Q6ZNM6 134 aa9.58□□□□□ -0.88
SNX6-205ENST00000555648 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
SNX6-205ENST00000555648 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
SNX6-205ENST00000555648 CYSLTR1Q9Y271 337 aa9.57□□□□□ -0.88
SNX6-205ENST00000555648 FAM104AQ969W3 186 aa9.56□□□□□ -0.88
SNX6-205ENST00000555648 IGLV4-3A0A075B6K6 122 aa9.55□□□□□ -0.88
SNX6-205ENST00000555648 A0A087WZ39 114 aa9.55□□□□□ -0.88
SNX6-205ENST00000555648 ORMDL2Q53FV1 153 aa9.55□□□□□ -0.88
SNX6-205ENST00000555648 UNQ6190/PRO20217Q6UXQ8 127 aa9.55□□□□□ -0.88
SNX6-205ENST00000555648 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
SNX6-205ENST00000555648 PRSS47A8MTI9 375 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 SRSF9Q13242 221 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNX6-205ENST00000555648 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 C1orf137Q5JT78 98 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 LINC00242Q5T6M2 205 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 C2orf66Q6UXQ4 117 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
SNX6-205ENST00000555648 Q8N8P6 123 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 PACRGQ96M98 296 aaPredicted RBP9.54□□□□□ -0.88
SNX6-205ENST00000555648 CTDSP1Q9GZU7 261 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 VCX2Q9H322 139 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
SNX6-205ENST00000555648 PRSS2P07478 247 aa9.53□□□□□ -0.88
SNX6-205ENST00000555648 C10orf25Q5T742 122 aa9.53□□□□□ -0.88
SNX6-205ENST00000555648 TLX1NBP0CAT3 122 aa9.52□□□□□ -0.89
SNX6-205ENST00000555648 G0S2P27469 103 aa9.52□□□□□ -0.89
SNX6-205ENST00000555648 NXT2Q9NPJ8 142 aaKnown RBP9.52□□□□□ -0.89
SNX6-205ENST00000555648 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.89
SNX6-205ENST00000555648 TRBV30A0A0K0K1B3 111 aa9.51□□□□□ -0.89
SNX6-205ENST00000555648 K7EMI3 77 aa9.51□□□□□ -0.89
SNX6-205ENST00000555648 UBE2D1P51668 147 aa9.51□□□□□ -0.89
SNX6-205ENST00000555648 PAPPA-AS1Q5QFB9 102 aa9.51□□□□□ -0.89
SNX6-205ENST00000555648 FAM19A5Q7Z5A7 132 aaPredicted RBP9.51□□□□□ -0.89
SNX6-205ENST00000555648 CKS1BP61024 79 aa9.5□□□□□ -0.89
SNX6-205ENST00000555648 LINC01561Q8N1V8 128 aa9.5□□□□□ -0.89
SNX6-205ENST00000555648 TOMM7Q9P0U1 55 aa9.5□□□□□ -0.89
SNX6-205ENST00000555648 NPSP0C0P6 89 aa9.49□□□□□ -0.89
SNX6-205ENST00000555648 UBE2BP63146 152 aa9.49□□□□□ -0.89
SNX6-205ENST00000555648 SEC11AP67812 179 aa9.49□□□□□ -0.89
SNX6-205ENST00000555648 KIAA0087Q14695 138 aa9.49□□□□□ -0.89
SNX6-205ENST00000555648 PKHD1L1Q86WI1 4243 aa9.48□□□□□ -0.89
SNX6-205ENST00000555648 FAM168BA1KXE4 195 aa9.48□□□□□ -0.89
SNX6-205ENST00000555648 KRTAP10-8P60410 259 aa9.48□□□□□ -0.89
SNX6-205ENST00000555648 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
SNX6-205ENST00000555648 C2orf82Q6UX34 121 aa9.48□□□□□ -0.89
SNX6-205ENST00000555648 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
SNX6-205ENST00000555648 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
SNX6-205ENST00000555648 CLLU1Q5K131 121 aa9.47□□□□□ -0.89
SNX6-205ENST00000555648 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
SNX6-205ENST00000555648 AMELXQ99217 191 aa9.47□□□□□ -0.89
SNX6-205ENST00000555648 GEMIN7Q9H840 131 aaKnown RBP9.47□□□□□ -0.89
SNX6-205ENST00000555648 M0QXV9 152 aa9.46□□□□□ -0.9
SNX6-205ENST00000555648 IGLV7-43P04211 117 aa9.46□□□□□ -0.9
SNX6-205ENST00000555648 HERVK_113P63121 156 aa9.46□□□□□ -0.9
SNX6-205ENST00000555648 ALKBH7Q9BT30 221 aaPredicted RBP9.46□□□□□ -0.9
SNX6-205ENST00000555648 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
SNX6-205ENST00000555648 S100PP25815 95 aa9.45□□□□□ -0.9
SNX6-205ENST00000555648 UQCC3Q6UW78 93 aa9.45□□□□□ -0.9
SNX6-205ENST00000555648 LINC00173Q6ZV60 143 aa9.45□□□□□ -0.9
SNX6-205ENST00000555648 KIAA1644Q3SXP7 199 aa9.44□□□□□ -0.9
SNX6-205ENST00000555648 TIMM17AQ99595 171 aa9.44□□□□□ -0.9
SNX6-205ENST00000555648 HMCN2Q8NDA2 5059 aa9.44□□□□□ -0.9
SNX6-205ENST00000555648 TRAV9-1A0A075B6T8 112 aa9.43□□□□□ -0.9
SNX6-205ENST00000555648 ODF1Q14990 250 aa9.43□□□□□ -0.9
SNX6-205ENST00000555648 Q8IZM0 81 aa9.43□□□□□ -0.9
SNX6-205ENST00000555648 SCGB3A1Q96QR1 104 aa9.43□□□□□ -0.9
SNX6-205ENST00000555648 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
SNX6-205ENST00000555648 TOMM6Q96B49 74 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms