RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 LOC389332A0A1B0GUA5 103 aa15.35■□□□□ 0.05
PRKCH-216ENST00000555542 C2orf48Q96LS8 159 aa15.35■□□□□ 0.05
PRKCH-216ENST00000555542 MAP1LC3AQ9H492 121 aa15.35■□□□□ 0.05
PRKCH-216ENST00000555542 FAT3Q8TDW7 4589 aa15.34■□□□□ 0.05
PRKCH-216ENST00000555542 PTTG1IPP53801 180 aa15.34■□□□□ 0.05
PRKCH-216ENST00000555542 PRR3P79522 188 aaKnown RBP15.33■□□□□ 0.04
PRKCH-216ENST00000555542 OR10D4PQ8NGN7 298 aa15.33■□□□□ 0.04
PRKCH-216ENST00000555542 ORAOV1Q8WV07 137 aa15.33■□□□□ 0.04
PRKCH-216ENST00000555542 LAMTOR2Q9Y2Q5 125 aa15.33■□□□□ 0.04
PRKCH-216ENST00000555542 RPL18AQ02543 176 aaKnown RBP15.32■□□□□ 0.04
PRKCH-216ENST00000555542 FAM104AQ969W3 186 aa15.32■□□□□ 0.04
PRKCH-216ENST00000555542 TGIF2-C20orf24A0A0A6YYL0 155 aa15.3■□□□□ 0.04
PRKCH-216ENST00000555542 IGHV3OR16-9A0A0B4J2B5 98 aa15.29■□□□□ 0.04
PRKCH-216ENST00000555542 CLLU1Q5K131 121 aa15.29■□□□□ 0.04
PRKCH-216ENST00000555542 TMEM141Q96I45 108 aa15.28■□□□□ 0.04
PRKCH-216ENST00000555542 PYGO1Q9Y3Y4 419 aa15.28■□□□□ 0.04
PRKCH-216ENST00000555542 A0A0J9YXV3 536 aa15.27■□□□□ 0.04
PRKCH-216ENST00000555542 PRSS47A8MTI9 375 aa15.27■□□□□ 0.04
PRKCH-216ENST00000555542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.27■□□□□ 0.04
PRKCH-216ENST00000555542 CTDSP1Q9GZU7 261 aa15.27■□□□□ 0.04
PRKCH-216ENST00000555542 IGLV4-3A0A075B6K6 122 aa15.26■□□□□ 0.03
PRKCH-216ENST00000555542 NDUFA1O15239 70 aa15.26■□□□□ 0.03
PRKCH-216ENST00000555542 TEX43Q6ZNM6 134 aa15.26■□□□□ 0.03
PRKCH-216ENST00000555542 Q8N8P6 123 aa15.26■□□□□ 0.03
PRKCH-216ENST00000555542 CYSLTR1Q9Y271 337 aa15.26■□□□□ 0.03
PRKCH-216ENST00000555542 Q6ZN92 141 aa15.25■□□□□ 0.03
PRKCH-216ENST00000555542 C2orf88Q9BSF0 95 aa15.25■□□□□ 0.03
PRKCH-216ENST00000555542 F8WDY8 70 aa15.24■□□□□ 0.03
PRKCH-216ENST00000555542 RNF151Q2KHN1 245 aa15.24■□□□□ 0.03
PRKCH-216ENST00000555542 C2orf66Q6UXQ4 117 aa15.24■□□□□ 0.03
PRKCH-216ENST00000555542 Q6ZRP5 223 aa15.24■□□□□ 0.03
PRKCH-216ENST00000555542 MRPL35Q9NZE8 188 aaKnown RBP15.24■□□□□ 0.03
PRKCH-216ENST00000555542 PLA2G2DQ9UNK4 145 aa15.24■□□□□ 0.03
PRKCH-216ENST00000555542 ORMDL2Q53FV1 153 aa15.23■□□□□ 0.03
PRKCH-216ENST00000555542 IMMP2LQ96T52 175 aa15.23■□□□□ 0.03
PRKCH-216ENST00000555542 A0A1W2PNN7 141 aa15.22■□□□□ 0.03
PRKCH-216ENST00000555542 MT1HL1P0DM35 61 aa15.22■□□□□ 0.03
PRKCH-216ENST00000555542 C9orf116Q5BN46 136 aaPredicted RBP15.22■□□□□ 0.03
PRKCH-216ENST00000555542 LINC00242Q5T6M2 205 aa15.21■□□□□ 0.03
PRKCH-216ENST00000555542 UQCC3Q6UW78 93 aa15.21■□□□□ 0.03
PRKCH-216ENST00000555542 A0A087WZ39 114 aa15.2■□□□□ 0.02
PRKCH-216ENST00000555542 NXT2Q9NPJ8 142 aaKnown RBP15.2■□□□□ 0.02
PRKCH-216ENST00000555542 K7EMI3 77 aa15.19■□□□□ 0.02
PRKCH-216ENST00000555542 SPINK6Q6UWN8 80 aa15.19■□□□□ 0.02
PRKCH-216ENST00000555542 UNQ6190/PRO20217Q6UXQ8 127 aa15.19■□□□□ 0.02
PRKCH-216ENST00000555542 VCX2Q9H322 139 aa15.19■□□□□ 0.02
PRKCH-216ENST00000555542 ADCYAP1P18509 176 aa15.18■□□□□ 0.02
PRKCH-216ENST00000555542 UBE2D1P51668 147 aa15.18■□□□□ 0.02
PRKCH-216ENST00000555542 C10orf25Q5T742 122 aa15.18■□□□□ 0.02
PRKCH-216ENST00000555542 TMEM218A2RU14 115 aa15.17■□□□□ 0.02
PRKCH-216ENST00000555542 ZC2HC1BQ5TFG8 222 aa15.17■□□□□ 0.02
PRKCH-216ENST00000555542 KIAA1644Q3SXP7 199 aa15.16■□□□□ 0.02
PRKCH-216ENST00000555542 REG3GQ6UW15 175 aa15.16■□□□□ 0.02
PRKCH-216ENST00000555542 C6orf48Q9UBA6 75 aa15.16■□□□□ 0.02
PRKCH-216ENST00000555542 MT-ND6P03923 174 aa15.15■□□□□ 0.02
PRKCH-216ENST00000555542 G0S2P27469 103 aa15.15■□□□□ 0.02
PRKCH-216ENST00000555542 S100PP25815 95 aa15.14■□□□□ 0.01
PRKCH-216ENST00000555542 GAGE2EQ4V326 116 aa15.14■□□□□ 0.01
PRKCH-216ENST00000555542 PHF5AQ7RTV0 110 aaKnown RBP15.14■□□□□ 0.01
PRKCH-216ENST00000555542 GAGE2DQ9UEU5 116 aa15.14■□□□□ 0.01
PRKCH-216ENST00000555542 TRAV9-1A0A075B6T8 112 aa15.13■□□□□ 0.01
PRKCH-216ENST00000555542 NPSP0C0P6 89 aa15.13■□□□□ 0.01
PRKCH-216ENST00000555542 IFITM2Q01629 132 aa15.13■□□□□ 0.01
PRKCH-216ENST00000555542 PAPPA-AS1Q5QFB9 102 aa15.13■□□□□ 0.01
PRKCH-216ENST00000555542 PACRGQ96M98 296 aaPredicted RBP15.13■□□□□ 0.01
PRKCH-216ENST00000555542 LINC01600Q96MT4 127 aa15.13■□□□□ 0.01
PRKCH-216ENST00000555542 AMELXQ99217 191 aa15.13■□□□□ 0.01
PRKCH-216ENST00000555542 PRSS2P07478 247 aa15.12■□□□□ 0.01
PRKCH-216ENST00000555542 TLX1NBP0CAT3 122 aa15.12■□□□□ 0.01
PRKCH-216ENST00000555542 KIAA0087Q14695 138 aa15.12■□□□□ 0.01
PRKCH-216ENST00000555542 LINC00173Q6ZV60 143 aa15.12■□□□□ 0.01
PRKCH-216ENST00000555542 IGIPA6NJ69 53 aa15.11■□□□□ 0.01
PRKCH-216ENST00000555542 C2orf82Q6UX34 121 aa15.11■□□□□ 0.01
PRKCH-216ENST00000555542 LINC01561Q8N1V8 128 aa15.11■□□□□ 0.01
PRKCH-216ENST00000555542 SEC11CQ9BY50 192 aa15.11■□□□□ 0.01
PRKCH-216ENST00000555542 TOMM7Q9P0U1 55 aa15.11■□□□□ 0.01
PRKCH-216ENST00000555542 PSORS1C2Q9UIG4 136 aa15.11■□□□□ 0.01
PRKCH-216ENST00000555542 TRBV30A0A0K0K1B3 111 aa15.1■□□□□ 0.01
PRKCH-216ENST00000555542 FAM19A5Q7Z5A7 132 aaPredicted RBP15.1■□□□□ 0.01
PRKCH-216ENST00000555542 FAM168BA1KXE4 195 aa15.09■□□□□ 0.01
PRKCH-216ENST00000555542 SRSF9Q13242 221 aaKnown RBP eCLIP15.09■□□□□ 0.01
PRKCH-216ENST00000555542 C1orf137Q5JT78 98 aa15.09■□□□□ 0.01
PRKCH-216ENST00000555542 COMMD7Q86VX2 200 aa15.09■□□□□ 0.01
PRKCH-216ENST00000555542 SEC11AP67812 179 aa15.08■□□□□ 0
PRKCH-216ENST00000555542 GEMIN7Q9H840 131 aaKnown RBP15.08■□□□□ 0
PRKCH-216ENST00000555542 HMCN2Q8NDA2 5059 aa15.08■□□□□ 0
PRKCH-216ENST00000555542 CKS1BP61024 79 aa15.07■□□□□ 0
PRKCH-216ENST00000555542 HERVK_113P63121 156 aa15.07■□□□□ 0
PRKCH-216ENST00000555542 TOMM6Q96B49 74 aa15.07■□□□□ 0
PRKCH-216ENST00000555542 TIMM17AQ99595 171 aa15.07■□□□□ 0
PRKCH-216ENST00000555542 GNB1LQ9BYB4 327 aa15.06■□□□□ 0
PRKCH-216ENST00000555542 NDUFC2-KCTD14E9PQ53 114 aa15.05■□□□□ -0
PRKCH-216ENST00000555542 C6orf226Q5I0X4 101 aa15.05■□□□□ -0
PRKCH-216ENST00000555542 SCGB3A1Q96QR1 104 aa15.05■□□□□ -0
PRKCH-216ENST00000555542 FAM19A3Q7Z5A8 133 aa15.04■□□□□ -0
PRKCH-216ENST00000555542 ALKBH7Q9BT30 221 aaPredicted RBP15.04■□□□□ -0
PRKCH-216ENST00000555542 ERASQ7Z444 233 aa15.03■□□□□ -0
PRKCH-216ENST00000555542 CDKN2A-AS1Q9UH64 79 aa15.03■□□□□ -0
PRKCH-216ENST00000555542 COX19Q49B96 90 aa15.02■□□□□ -0
PRKCH-216ENST00000555542 Q8IZM0 81 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms