RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
NEK9-205ENST00000555405 ZNF22P17026 224 aaPredicted RBP6.92□□□□□ -1.3
NEK9-205ENST00000555405 PCP2Q8IVA1 136 aa6.92□□□□□ -1.3
NEK9-205ENST00000555405 H7C423 109 aa6.92□□□□□ -1.3
NEK9-205ENST00000555405 HERVK_113P61574 105 aa6.92□□□□□ -1.3
NEK9-205ENST00000555405 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
NEK9-205ENST00000555405 A0A1B0GUV1 79 aa6.91□□□□□ -1.3
NEK9-205ENST00000555405 C1orf43Q9BWL3 253 aa6.91□□□□□ -1.3
NEK9-205ENST00000555405 ENHOQ6UWT2 76 aa6.91□□□□□ -1.3
NEK9-205ENST00000555405 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
NEK9-205ENST00000555405 MRPS16Q9Y3D3 137 aaKnown RBP6.91□□□□□ -1.3
NEK9-205ENST00000555405 PSCAO43653 123 aa6.9□□□□□ -1.3
NEK9-205ENST00000555405 HERVK_113P63121 156 aa6.9□□□□□ -1.3
NEK9-205ENST00000555405 TSTD3H0UI37 97 aa6.9□□□□□ -1.31
NEK9-205ENST00000555405 H3BRM9 83 aa6.9□□□□□ -1.31
NEK9-205ENST00000555405 LGALS3P17931 250 aaKnown RBP6.9□□□□□ -1.31
NEK9-205ENST00000555405 HIGD2BQ4VC39 106 aa6.9□□□□□ -1.31
NEK9-205ENST00000555405 SCGB1D4Q6XE38 83 aa6.9□□□□□ -1.31
NEK9-205ENST00000555405 BATFQ16520 125 aa6.89□□□□□ -1.31
NEK9-205ENST00000555405 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
NEK9-205ENST00000555405 PKIAP61925 76 aa6.89□□□□□ -1.31
NEK9-205ENST00000555405 SEC11AP67812 179 aa6.89□□□□□ -1.31
NEK9-205ENST00000555405 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
NEK9-205ENST00000555405 ZNF815PA8K554 130 aa6.88□□□□□ -1.31
NEK9-205ENST00000555405 LINC01556Q5JQF7 62 aa6.88□□□□□ -1.31
NEK9-205ENST00000555405 COX7A2LO14548 114 aa6.88□□□□□ -1.31
NEK9-205ENST00000555405 IGLC3P0DOY3 106 aa6.88□□□□□ -1.31
NEK9-205ENST00000555405 CASC10Q5T4H9 136 aa6.88□□□□□ -1.31
NEK9-205ENST00000555405 CSMD3Q7Z407 3707 aa6.88□□□□□ -1.31
NEK9-205ENST00000555405 PRSS2P07478 247 aa6.88□□□□□ -1.31
NEK9-205ENST00000555405 NPC2P61916 151 aa6.88□□□□□ -1.31
NEK9-205ENST00000555405 MAPKAPK5-AS1Q8N8E1 139 aa6.88□□□□□ -1.31
NEK9-205ENST00000555405 TIRAPP58753 221 aa6.87□□□□□ -1.31
NEK9-205ENST00000555405 SLC25A34Q6PIV7 304 aa6.87□□□□□ -1.31
NEK9-205ENST00000555405 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
NEK9-205ENST00000555405 J3QQQ9 107 aa6.87□□□□□ -1.31
NEK9-205ENST00000555405 NFE4Q86UQ8 179 aa6.87□□□□□ -1.31
NEK9-205ENST00000555405 C2orf82Q6UX34 121 aa6.86□□□□□ -1.31
NEK9-205ENST00000555405 TMEM223A0PJW6 202 aa6.86□□□□□ -1.31
NEK9-205ENST00000555405 DNAH10OSP0CZ25 163 aa6.86□□□□□ -1.31
NEK9-205ENST00000555405 HNRNPA3P51991 378 aaKnown RBP6.86□□□□□ -1.31
NEK9-205ENST00000555405 TSPEAR-AS2P59090 65 aa6.86□□□□□ -1.31
NEK9-205ENST00000555405 KRTAP1-5Q9BYS1 174 aa6.86□□□□□ -1.31
NEK9-205ENST00000555405 IGHV3OR16-9A0A0B4J2B5 98 aa6.85□□□□□ -1.31
NEK9-205ENST00000555405 MIAQ16674 131 aa6.85□□□□□ -1.31
NEK9-205ENST00000555405 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
NEK9-205ENST00000555405 CD164L2Q6UWJ8 174 aa6.85□□□□□ -1.31
NEK9-205ENST00000555405 NDUFA12Q9UI09 145 aa6.85□□□□□ -1.31
NEK9-205ENST00000555405 PLECQ15149 4684 aaKnown RBP6.85□□□□□ -1.31
NEK9-205ENST00000555405 CFAP161Q6P656 301 aa6.85□□□□□ -1.31
NEK9-205ENST00000555405 C6orf223Q8N319 242 aa6.85□□□□□ -1.31
NEK9-205ENST00000555405 LYSTQ99698 3801 aa6.85□□□□□ -1.31
NEK9-205ENST00000555405 PFN2P35080 140 aa6.85□□□□□ -1.31
NEK9-205ENST00000555405 SMIM1B2RUZ4 78 aa6.84□□□□□ -1.31
NEK9-205ENST00000555405 E9PLD3 99 aa6.84□□□□□ -1.31
NEK9-205ENST00000555405 CKS1BP61024 79 aa6.84□□□□□ -1.31
NEK9-205ENST00000555405 DAND5Q8N907 189 aa6.84□□□□□ -1.31
NEK9-205ENST00000555405 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
NEK9-205ENST00000555405 IGHV1-58A0A0C4DH39 117 aa6.84□□□□□ -1.31
NEK9-205ENST00000555405 CTAG1AP78358 180 aa6.84□□□□□ -1.31
NEK9-205ENST00000555405 C10orf126Q8N4M7 172 aa6.84□□□□□ -1.31
NEK9-205ENST00000555405 UQCR10Q9UDW1 63 aa6.84□□□□□ -1.31
NEK9-205ENST00000555405 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.83□□□□□ -1.32
NEK9-205ENST00000555405 ZNF561-AS1K7EIQ3 104 aa6.83□□□□□ -1.32
NEK9-205ENST00000555405 SRSF9Q13242 221 aaKnown RBP eCLIP6.83□□□□□ -1.32
NEK9-205ENST00000555405 PLEKHB2Q96CS7 222 aa6.83□□□□□ -1.32
NEK9-205ENST00000555405 NPSP0C0P6 89 aa6.83□□□□□ -1.32
NEK9-205ENST00000555405 SPAG11BQ08648 103 aa6.83□□□□□ -1.32
NEK9-205ENST00000555405 PRR34Q9NV39 138 aa6.83□□□□□ -1.32
NEK9-205ENST00000555405 LEPROTO15243 131 aa6.83□□□□□ -1.32
NEK9-205ENST00000555405 COX8AP10176 69 aa6.83□□□□□ -1.32
NEK9-205ENST00000555405 COX7B2Q8TF08 81 aa6.83□□□□□ -1.32
NEK9-205ENST00000555405 TRAV8-4A0A0B4J246 113 aa6.82□□□□□ -1.32
NEK9-205ENST00000555405 NBDYA0A0U1RRE5 68 aa6.82□□□□□ -1.32
NEK9-205ENST00000555405 IBA57-AS1B1ANH7 110 aa6.82□□□□□ -1.32
NEK9-205ENST00000555405 FOXI1Q12951 378 aa6.82□□□□□ -1.32
NEK9-205ENST00000555405 A0A087WZ39 114 aa6.82□□□□□ -1.32
NEK9-205ENST00000555405 FUSP35637 526 aaKnown RBP eCLIP6.82□□□□□ -1.32
NEK9-205ENST00000555405 HINT1P49773 126 aaPredicted RBP6.82□□□□□ -1.32
NEK9-205ENST00000555405 C9orf116Q5BN46 136 aaPredicted RBP6.82□□□□□ -1.32
NEK9-205ENST00000555405 MYMXA0A1B0GTQ4 84 aa6.82□□□□□ -1.32
NEK9-205ENST00000555405 APOMO95445 188 aa6.82□□□□□ -1.32
NEK9-205ENST00000555405 DDTP30046 118 aa6.82□□□□□ -1.32
NEK9-205ENST00000555405 MIEN1Q9BRT3 115 aa6.82□□□□□ -1.32
NEK9-205ENST00000555405 LINC00158P58513 81 aa6.81□□□□□ -1.32
NEK9-205ENST00000555405 GCSHP23434 173 aa6.8□□□□□ -1.32
NEK9-205ENST00000555405 UNQ6190/PRO20217Q6UXQ8 127 aa6.8□□□□□ -1.32
NEK9-205ENST00000555405 RMI2Q96E14 147 aa6.8□□□□□ -1.32
NEK9-205ENST00000555405 HIST1H4GQ99525 98 aa6.8□□□□□ -1.32
NEK9-205ENST00000555405 UPK3BQ9BT76 320 aa6.8□□□□□ -1.32
NEK9-205ENST00000555405 C3orf84H3BNL1 204 aa6.8□□□□□ -1.32
NEK9-205ENST00000555405 CAMK2N2Q96S95 79 aa6.8□□□□□ -1.32
NEK9-205ENST00000555405 USP17L23D6RBM5 183 aa6.79□□□□□ -1.32
NEK9-205ENST00000555405 LINC00587B1AMM8 73 aa6.79□□□□□ -1.32
NEK9-205ENST00000555405 TTC32Q5I0X7 151 aa6.79□□□□□ -1.32
NEK9-205ENST00000555405 SMIM13P0DJ93 91 aa6.78□□□□□ -1.32
NEK9-205ENST00000555405 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
NEK9-205ENST00000555405 LINC00476Q8WZB0 136 aa6.78□□□□□ -1.32
NEK9-205ENST00000555405 IGLV5-45A0A087WSX0 123 aa6.78□□□□□ -1.32
NEK9-205ENST00000555405 C10orf25Q5T742 122 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms