RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 ANAPC11Q9NYG5 84 aa5.55□□□□□ -1.52
SCFD1-215ENST00000555259 UBE2D4Q9Y2X8 147 aa5.55□□□□□ -1.52
SCFD1-215ENST00000555259 TRBV27A0A0K0K1C4 114 aa5.55□□□□□ -1.52
SCFD1-215ENST00000555259 RAB19A4D1S5 217 aa5.55□□□□□ -1.52
SCFD1-215ENST00000555259 GNG4P50150 75 aa5.55□□□□□ -1.52
SCFD1-215ENST00000555259 POLR2KP53803 58 aaKnown RBP5.55□□□□□ -1.52
SCFD1-215ENST00000555259 ASB16-AS1Q495Z4 193 aa5.55□□□□□ -1.52
SCFD1-215ENST00000555259 RPL28P46779 137 aaKnown RBP5.54□□□□□ -1.52
SCFD1-215ENST00000555259 CCL20P78556 96 aa5.54□□□□□ -1.52
SCFD1-215ENST00000555259 Q6ZUT4 128 aa5.54□□□□□ -1.52
SCFD1-215ENST00000555259 NUDT10Q8NFP7 164 aa5.54□□□□□ -1.52
SCFD1-215ENST00000555259 NUDT11Q96G61 164 aa5.54□□□□□ -1.52
SCFD1-215ENST00000555259 TRBV20OR9-2A0A075B6H5 130 aa5.53□□□□□ -1.52
SCFD1-215ENST00000555259 IGHV3OR16-9A0A0B4J2B5 98 aa5.53□□□□□ -1.52
SCFD1-215ENST00000555259 NDUFC2-KCTD14E9PQ53 114 aa5.53□□□□□ -1.52
SCFD1-215ENST00000555259 GIPP09681 153 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-215ENST00000555259 UMAD1C9J7I0 102 aa5.52□□□□□ -1.53
SCFD1-215ENST00000555259 SMAGPQ0VAQ4 97 aa5.52□□□□□ -1.53
SCFD1-215ENST00000555259 BIN3Q9NQY0 253 aa5.52□□□□□ -1.53
SCFD1-215ENST00000555259 NDUFA13Q9P0J0 144 aa5.52□□□□□ -1.53
SCFD1-215ENST00000555259 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
SCFD1-215ENST00000555259 BCE1O60756 84 aa5.51□□□□□ -1.53
SCFD1-215ENST00000555259 H2AFB1P0C5Y9 115 aa5.51□□□□□ -1.53
SCFD1-215ENST00000555259 FCER1GP30273 86 aa5.51□□□□□ -1.53
SCFD1-215ENST00000555259 LINC00242Q5T6M2 205 aa5.51□□□□□ -1.53
SCFD1-215ENST00000555259 MANBALQ9NQG1 85 aa5.51□□□□□ -1.53
SCFD1-215ENST00000555259 GNG13Q9P2W3 67 aa5.51□□□□□ -1.53
SCFD1-215ENST00000555259 C22orf24Q9Y442 160 aa5.51□□□□□ -1.53
SCFD1-215ENST00000555259 TRBV30A0A0K0K1B3 111 aa5.5□□□□□ -1.53
SCFD1-215ENST00000555259 CTAG1AP78358 180 aa5.5□□□□□ -1.53
SCFD1-215ENST00000555259 KIAA0087Q14695 138 aa5.5□□□□□ -1.53
SCFD1-215ENST00000555259 ARPC5O15511 151 aa5.5□□□□□ -1.53
SCFD1-215ENST00000555259 FAM229BQ4G0N7 80 aa5.5□□□□□ -1.53
SCFD1-215ENST00000555259 LBHQ53QV2 105 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-215ENST00000555259 LINC00337Q8N6G1 96 aa5.5□□□□□ -1.53
SCFD1-215ENST00000555259 TIMM21Q9BVV7 248 aa5.5□□□□□ -1.53
SCFD1-215ENST00000555259 VCYO14598 125 aa5.49□□□□□ -1.53
SCFD1-215ENST00000555259 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
SCFD1-215ENST00000555259 C2orf82Q6UX34 121 aa5.49□□□□□ -1.53
SCFD1-215ENST00000555259 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
SCFD1-215ENST00000555259 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
SCFD1-215ENST00000555259 PACRGQ96M98 296 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-215ENST00000555259 IGKV2D-26A0A0A0MRZ7 120 aa5.47□□□□□ -1.53
SCFD1-215ENST00000555259 K7EN84 100 aa5.47□□□□□ -1.53
SCFD1-215ENST00000555259 PDE6DO43924 150 aa5.47□□□□□ -1.53
SCFD1-215ENST00000555259 FP248Q71RG6 208 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-215ENST00000555259 LINC00469Q8N7U9 141 aa5.47□□□□□ -1.53
SCFD1-215ENST00000555259 KIR2DL4Q99706 377 aa5.47□□□□□ -1.53
SCFD1-215ENST00000555259 MED9Q9NWA0 146 aa5.47□□□□□ -1.53
SCFD1-215ENST00000555259 CFC1BP0CG36 223 aa5.46□□□□□ -1.53
SCFD1-215ENST00000555259 RAB4AP20338 218 aa5.46□□□□□ -1.53
SCFD1-215ENST00000555259 MT1HP80294 61 aa5.46□□□□□ -1.53
SCFD1-215ENST00000555259 MRPL55Q7Z7F7 128 aaKnown RBP5.46□□□□□ -1.53
SCFD1-215ENST00000555259 TMEM18Q96B42 140 aa5.46□□□□□ -1.53
SCFD1-215ENST00000555259 TMEM191AQ9H0A3 160 aa5.46□□□□□ -1.53
SCFD1-215ENST00000555259 XAGE1AQ9HD64 81 aa5.46□□□□□ -1.53
SCFD1-215ENST00000555259 TP73-AS1Q9UF72 201 aa5.46□□□□□ -1.53
SCFD1-215ENST00000555259 ZNF727A8MUV8 499 aa5.46□□□□□ -1.54
SCFD1-215ENST00000555259 SMKR1H3BMG3 65 aa5.46□□□□□ -1.54
SCFD1-215ENST00000555259 SUMO2P61956 95 aaKnown RBP5.46□□□□□ -1.54
SCFD1-215ENST00000555259 KRTAP13-1Q8IUC0 172 aa5.46□□□□□ -1.54
SCFD1-215ENST00000555259 AMN1Q8IY45 258 aa5.46□□□□□ -1.54
SCFD1-215ENST00000555259 TGIF2-C20orf24A0A0A6YYL0 155 aa5.45□□□□□ -1.54
SCFD1-215ENST00000555259 IFITM10A6NMD0 228 aa5.45□□□□□ -1.54
SCFD1-215ENST00000555259 RPL39P62891 51 aaKnown RBP5.45□□□□□ -1.54
SCFD1-215ENST00000555259 NRACQ8N912 160 aa5.45□□□□□ -1.54
SCFD1-215ENST00000555259 OCC1Q8TAD7 63 aa5.45□□□□□ -1.54
SCFD1-215ENST00000555259 RPL37AP8A6NKH3 93 aa5.44□□□□□ -1.54
SCFD1-215ENST00000555259 HBBP68871 147 aa5.44□□□□□ -1.54
SCFD1-215ENST00000555259 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
SCFD1-215ENST00000555259 BORCS7Q96B45 105 aa5.44□□□□□ -1.54
SCFD1-215ENST00000555259 A8MWL6 223 aa5.43□□□□□ -1.54
SCFD1-215ENST00000555259 PPP1R17O96001 155 aa5.43□□□□□ -1.54
SCFD1-215ENST00000555259 UBE2AP49459 152 aa5.43□□□□□ -1.54
SCFD1-215ENST00000555259 MRPS36P82909 103 aaKnown RBP5.43□□□□□ -1.54
SCFD1-215ENST00000555259 LINC00167Q96N53 147 aa5.43□□□□□ -1.54
SCFD1-215ENST00000555259 SPANXA1Q9NS26 97 aa5.43□□□□□ -1.54
SCFD1-215ENST00000555259 A0A1B0GUT8 65 aa5.42□□□□□ -1.54
SCFD1-215ENST00000555259 GATCO43716 136 aaKnown RBP5.42□□□□□ -1.54
SCFD1-215ENST00000555259 ZNF345Q14585 488 aa5.42□□□□□ -1.54
SCFD1-215ENST00000555259 PPP1R2P9O14990 202 aa5.42□□□□□ -1.54
SCFD1-215ENST00000555259 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-215ENST00000555259 SPAG11AQ6PDA7 123 aa5.42□□□□□ -1.54
SCFD1-215ENST00000555259 C3orf22Q8N5N4 141 aa5.42□□□□□ -1.54
SCFD1-215ENST00000555259 GAGE10A6NGK3 116 aa5.41□□□□□ -1.54
SCFD1-215ENST00000555259 HIGD1CA8MV81 97 aa5.41□□□□□ -1.54
SCFD1-215ENST00000555259 TEX46H3BTG2 121 aa5.41□□□□□ -1.54
SCFD1-215ENST00000555259 CT83Q5H943 113 aa5.41□□□□□ -1.54
SCFD1-215ENST00000555259 FAM231DQ6ZW35 169 aa5.41□□□□□ -1.54
SCFD1-215ENST00000555259 SMLR1H3BR10 107 aa5.4□□□□□ -1.55
SCFD1-215ENST00000555259 CKS1BP61024 79 aa5.4□□□□□ -1.55
SCFD1-215ENST00000555259 RPL32P62910 135 aaKnown RBP5.4□□□□□ -1.55
SCFD1-215ENST00000555259 KANTRA0A1W2PQU2 76 aa5.39□□□□□ -1.55
SCFD1-215ENST00000555259 TCAPO15273 167 aa5.39□□□□□ -1.55
SCFD1-215ENST00000555259 PRSS2P07478 247 aa5.39□□□□□ -1.55
SCFD1-215ENST00000555259 LINC01561Q8N1V8 128 aa5.39□□□□□ -1.55
SCFD1-215ENST00000555259 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
SCFD1-215ENST00000555259 PNRC1Q12796 327 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-215ENST00000555259 C20orf78Q9BR46 151 aa5.38□□□□□ -1.55
SCFD1-215ENST00000555259 TOMM7Q9P0U1 55 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms