RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 K7EQD1 137 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 TIMM17BO60830 172 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 GAGE7O76087 117 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 GAGE12FP0CL80 117 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 GAGE12GP0CL81 117 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 GAGE12IP0CL82 117 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 SMR3AQ99954 134 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 C1orf158Q8N1D5 194 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 COPS9Q8WXC6 57 aa6.83□□□□□ -1.32
SYNE2-213ENST00000554805 CITED1Q99966 193 aa6.82□□□□□ -1.32
SYNE2-213ENST00000554805 SS18L2Q9UHA2 77 aa6.82□□□□□ -1.32
SYNE2-213ENST00000554805 SETXQ7Z333 2677 aaKnown RBP6.82□□□□□ -1.32
SYNE2-213ENST00000554805 A8MTW9 85 aa6.82□□□□□ -1.32
SYNE2-213ENST00000554805 PLA2G2AP14555 144 aa6.82□□□□□ -1.32
SYNE2-213ENST00000554805 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
SYNE2-213ENST00000554805 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
SYNE2-213ENST00000554805 GAGE6Q13070 117 aa6.81□□□□□ -1.32
SYNE2-213ENST00000554805 CITED2Q99967 270 aaPredicted RBP6.81□□□□□ -1.32
SYNE2-213ENST00000554805 TRGV4A0A0C4DH28 118 aa6.81□□□□□ -1.32
SYNE2-213ENST00000554805 SMIM1B2RUZ4 78 aa6.81□□□□□ -1.32
SYNE2-213ENST00000554805 CCL24O00175 119 aa6.81□□□□□ -1.32
SYNE2-213ENST00000554805 FSHBP01225 129 aa6.81□□□□□ -1.32
SYNE2-213ENST00000554805 DAZ2Q13117 558 aaKnown RBP6.81□□□□□ -1.32
SYNE2-213ENST00000554805 Q6Q795 121 aa6.81□□□□□ -1.32
SYNE2-213ENST00000554805 DAZ4Q86SG3 579 aaKnown RBP6.81□□□□□ -1.32
SYNE2-213ENST00000554805 DAZ3Q9NR90 486 aaKnown RBP6.81□□□□□ -1.32
SYNE2-213ENST00000554805 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
SYNE2-213ENST00000554805 IGLV5-45A0A087WSX0 123 aa6.8□□□□□ -1.32
SYNE2-213ENST00000554805 LOC100131303A0A0U1RQF7 123 aa6.8□□□□□ -1.32
SYNE2-213ENST00000554805 COX7A2LO14548 114 aa6.8□□□□□ -1.32
SYNE2-213ENST00000554805 LINC00158P58513 81 aa6.8□□□□□ -1.32
SYNE2-213ENST00000554805 SOSTDC1Q6X4U4 206 aa6.8□□□□□ -1.32
SYNE2-213ENST00000554805 PPDPFQ9H3Y8 114 aa6.8□□□□□ -1.32
SYNE2-213ENST00000554805 CHCHD5Q9BSY4 110 aa6.8□□□□□ -1.32
SYNE2-213ENST00000554805 WFDC10AQ9H1F0 79 aa6.8□□□□□ -1.32
SYNE2-213ENST00000554805 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
SYNE2-213ENST00000554805 TRBV10-1A0A0K0K1A3 114 aa6.79□□□□□ -1.32
SYNE2-213ENST00000554805 BAALC-AS2P0C853 105 aa6.79□□□□□ -1.32
SYNE2-213ENST00000554805 Q8N2B8 174 aa6.79□□□□□ -1.32
SYNE2-213ENST00000554805 CDC42SE2Q9NRR3 84 aa6.79□□□□□ -1.32
SYNE2-213ENST00000554805 CRPP02741 224 aa6.78□□□□□ -1.32
SYNE2-213ENST00000554805 C11orf68Q9H3H3 251 aaKnown RBP6.78□□□□□ -1.32
SYNE2-213ENST00000554805 TRAV25A0A0B4J276 109 aa6.78□□□□□ -1.32
SYNE2-213ENST00000554805 CCDC179H3BU77 68 aa6.78□□□□□ -1.32
SYNE2-213ENST00000554805 PFN2P35080 140 aa6.77□□□□□ -1.33
SYNE2-213ENST00000554805 HERV-K104P63124 156 aa6.77□□□□□ -1.33
SYNE2-213ENST00000554805 MIR7-3HGQ8N6C7 128 aa6.77□□□□□ -1.33
SYNE2-213ENST00000554805 OR13C6PQ8NH95 151 aa6.77□□□□□ -1.33
SYNE2-213ENST00000554805 Q9HAA7 133 aa6.77□□□□□ -1.33
SYNE2-213ENST00000554805 DNAJC9-AS1A6NH13 148 aa6.77□□□□□ -1.33
SYNE2-213ENST00000554805 NHLRC4P0CG21 123 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-213ENST00000554805 C5orf38Q86SI9 138 aa6.77□□□□□ -1.33
SYNE2-213ENST00000554805 COX7B2Q8TF08 81 aa6.77□□□□□ -1.33
SYNE2-213ENST00000554805 DNAL4O96015 105 aa6.76□□□□□ -1.33
SYNE2-213ENST00000554805 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
SYNE2-213ENST00000554805 DEFB130BP0DP73 79 aa6.76□□□□□ -1.33
SYNE2-213ENST00000554805 DEFB130AP0DP74 79 aa6.76□□□□□ -1.33
SYNE2-213ENST00000554805 SND1-IT1Q9HBX3 110 aa6.76□□□□□ -1.33
SYNE2-213ENST00000554805 GAGE2AQ6NT46 116 aa6.75□□□□□ -1.33
SYNE2-213ENST00000554805 AKAP9Q99996 3911 aa6.75□□□□□ -1.33
SYNE2-213ENST00000554805 PAX4O43316 350 aa6.75□□□□□ -1.33
SYNE2-213ENST00000554805 DEFB121Q5J5C9 76 aa6.75□□□□□ -1.33
SYNE2-213ENST00000554805 TRAV13-2A0A0B4J235 113 aa6.75□□□□□ -1.33
SYNE2-213ENST00000554805 CSDC2Q9Y534 153 aaKnown RBP6.75□□□□□ -1.33
SYNE2-213ENST00000554805 KMT2BQ9UMN6 2715 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-213ENST00000554805 F5H768 121 aa6.74□□□□□ -1.33
SYNE2-213ENST00000554805 C3orf56Q8N813 242 aa6.74□□□□□ -1.33
SYNE2-213ENST00000554805 OTOGQ6ZRI0 2925 aa6.74□□□□□ -1.33
SYNE2-213ENST00000554805 C16orf74Q96GX8 76 aa6.74□□□□□ -1.33
SYNE2-213ENST00000554805 MRPL23Q16540 153 aaKnown RBP6.74□□□□□ -1.33
SYNE2-213ENST00000554805 FAM240AA0A1B0GVK7 77 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 FAM218AQ96MZ4 157 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 HIVEP1P15822 2718 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 IGLV4-60A0A075B6I1 120 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 TRACP01848 142 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 C6orf226Q5I0X4 101 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 FAM110AQ9BQ89 295 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 VWFP04275 2813 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 FAM236AA0A1B0GUQ0 79 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 FAM236BA0A1B0GV22 79 aa6.73□□□□□ -1.33
SYNE2-213ENST00000554805 ATP5G1P05496 136 aa6.72□□□□□ -1.33
SYNE2-213ENST00000554805 ACYP1P07311 99 aa6.72□□□□□ -1.33
SYNE2-213ENST00000554805 CMC4P56277 68 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-213ENST00000554805 CLPSL2Q6UWE3 100 aa6.72□□□□□ -1.33
SYNE2-213ENST00000554805 TMEM86BQ8N661 226 aa6.72□□□□□ -1.33
SYNE2-213ENST00000554805 IL17DQ8TAD2 202 aa6.72□□□□□ -1.33
SYNE2-213ENST00000554805 MAST4O15021 2626 aa6.72□□□□□ -1.33
SYNE2-213ENST00000554805 CR1P17927 2039 aa6.72□□□□□ -1.33
SYNE2-213ENST00000554805 A0A096LPF7 62 aa6.71□□□□□ -1.33
SYNE2-213ENST00000554805 XCL1P47992 114 aa6.71□□□□□ -1.33
SYNE2-213ENST00000554805 ESM1Q9NQ30 184 aa6.71□□□□□ -1.33
SYNE2-213ENST00000554805 BAHCC1Q9P281 2608 aa6.71□□□□□ -1.33
SYNE2-213ENST00000554805 LINC00337Q8N6G1 96 aa6.71□□□□□ -1.34
SYNE2-213ENST00000554805 TRBV6-4A0A1B0GX49 114 aa6.71□□□□□ -1.34
SYNE2-213ENST00000554805 INAFM2P0DMQ5 153 aa6.71□□□□□ -1.34
SYNE2-213ENST00000554805 MALP21145 153 aa6.71□□□□□ -1.34
SYNE2-213ENST00000554805 TRBV6-8A0A0A6YYG3 113 aa6.7□□□□□ -1.34
SYNE2-213ENST00000554805 GIG44P09565 113 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-213ENST00000554805 CCL18P55774 89 aa6.7□□□□□ -1.34
SYNE2-213ENST00000554805 LRRC75A-AS1Q8N1F1 130 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms