RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 DIP2BQ9P265 1576 aa1.74□□□□□ -2.13
SCFD1-211ENST00000554437 A0A096LNT2 108 aa1.74□□□□□ -2.13
SCFD1-211ENST00000554437 SUPT6HQ7KZ85 1726 aaKnown RBP1.74□□□□□ -2.13
SCFD1-211ENST00000554437 H3BUT2 72 aa1.73□□□□□ -2.13
SCFD1-211ENST00000554437 SMIM11BQ8TCY0 68 aa1.73□□□□□ -2.13
SCFD1-211ENST00000554437 PLAC4Q8WY50 150 aa1.73□□□□□ -2.13
SCFD1-211ENST00000554437 PI4KAP42356 2102 aa1.72□□□□□ -2.13
SCFD1-211ENST00000554437 CCDC88BA6NC98 1476 aa1.72□□□□□ -2.13
SCFD1-211ENST00000554437 LEPROTL1O95214 131 aa1.72□□□□□ -2.13
SCFD1-211ENST00000554437 LY6G6CO95867 125 aa1.72□□□□□ -2.13
SCFD1-211ENST00000554437 DEFA5Q01523 94 aa1.72□□□□□ -2.13
SCFD1-211ENST00000554437 SPRR4Q96PI1 79 aa1.72□□□□□ -2.13
SCFD1-211ENST00000554437 SPTBP11277 2137 aa1.72□□□□□ -2.13
SCFD1-211ENST00000554437 NEXMIFQ5QGS0 1516 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.71□□□□□ -2.14
SCFD1-211ENST00000554437 KIF21AQ7Z4S6 1674 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 CCDC141Q6ZP82 1450 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 SMIM31A0A1B0GVY4 71 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 IQCF6A8MYZ5 107 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 D6R8Y8 96 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 PDCD5O14737 125 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 MUSTN1Q8IVN3 82 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 ANKARQ7Z5J8 1434 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 DLG5Q8TDM6 1919 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 DNMBPQ6XZF7 1577 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 SCN7AQ01118 1682 aa1.71□□□□□ -2.14
SCFD1-211ENST00000554437 A0A087WVE0 104 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 GVQW2A0A096LPI5 108 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-211ENST00000554437 MYMXA0A1B0GTQ4 84 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 PRB1P04280 392 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 Q6ZRX8 168 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 FDCSPQ8NFU4 85 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 LINC00846Q9NV44 126 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 IFT172Q9UG01 1749 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 ERICH3Q5RHP9 1530 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 KCPQ6ZWJ8 1503 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 DOCK11Q5JSL3 2073 aa1.7□□□□□ -2.14
SCFD1-211ENST00000554437 PRRC2BQ5JSZ5 2229 aaKnown RBP1.69□□□□□ -2.14
SCFD1-211ENST00000554437 GCHFRP30047 84 aa1.69□□□□□ -2.14
SCFD1-211ENST00000554437 RPL37P61927 97 aaKnown RBP1.69□□□□□ -2.14
SCFD1-211ENST00000554437 LINC00472Q9H8W2 130 aa1.69□□□□□ -2.14
SCFD1-211ENST00000554437 CFDP00746 253 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-211ENST00000554437 SPINT3P49223 89 aa1.68□□□□□ -2.14
SCFD1-211ENST00000554437 PLGLAQ15195 96 aa1.68□□□□□ -2.14
SCFD1-211ENST00000554437 C18orf32Q8TCD1 76 aa1.68□□□□□ -2.14
SCFD1-211ENST00000554437 TMEM263Q8WUH6 116 aaKnown RBP1.68□□□□□ -2.14
SCFD1-211ENST00000554437 CACNA1BQ00975 2339 aa1.68□□□□□ -2.14
SCFD1-211ENST00000554437 NCOA2Q15596 1464 aa1.68□□□□□ -2.14
SCFD1-211ENST00000554437 ABCC1P33527 1531 aa1.67□□□□□ -2.14
SCFD1-211ENST00000554437 LYNX1P0DP58 116 aa1.67□□□□□ -2.14
SCFD1-211ENST00000554437 KRTAP21-3Q3LHN1 58 aa1.67□□□□□ -2.14
SCFD1-211ENST00000554437 RAPGEF6Q8TEU7 1601 aa1.66□□□□□ -2.14
SCFD1-211ENST00000554437 UBR1Q8IWV7 1749 aa1.66□□□□□ -2.14
SCFD1-211ENST00000554437 CEBPZOSA8MTT3 80 aa1.66□□□□□ -2.14
SCFD1-211ENST00000554437 CFAP74Q9C0B2 1584 aa1.66□□□□□ -2.14
SCFD1-211ENST00000554437 SDK1Q7Z5N4 2213 aa1.66□□□□□ -2.14
SCFD1-211ENST00000554437 BTAF1O14981 1849 aa1.66□□□□□ -2.14
SCFD1-211ENST00000554437 ZNF236Q9UL36 1845 aa1.66□□□□□ -2.14
SCFD1-211ENST00000554437 CUX1P39880 1505 aa1.66□□□□□ -2.14
SCFD1-211ENST00000554437 PDCD11Q14690 1871 aaKnown RBP1.65□□□□□ -2.14
SCFD1-211ENST00000554437 G3V318 75 aa1.65□□□□□ -2.15
SCFD1-211ENST00000554437 FXYD6P3P58550 94 aa1.65□□□□□ -2.15
SCFD1-211ENST00000554437 Q6JHZ5 121 aa1.65□□□□□ -2.15
SCFD1-211ENST00000554437 DEFB107AQ8IZN7 70 aa1.65□□□□□ -2.15
SCFD1-211ENST00000554437 LRRIQ1Q96JM4 1722 aa1.65□□□□□ -2.15
SCFD1-211ENST00000554437 PIN1P1O15428 100 aa1.64□□□□□ -2.15
SCFD1-211ENST00000554437 C10orf113Q5VZT2 155 aa1.64□□□□□ -2.15
SCFD1-211ENST00000554437 CLIP1P30622 1438 aa1.64□□□□□ -2.15
SCFD1-211ENST00000554437 SSC5DA1L4H1 1573 aa1.64□□□□□ -2.15
SCFD1-211ENST00000554437 LRRC9Q6ZRR7 1453 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 PTPN23Q9H3S7 1636 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 H0Y9P7 68 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 SMIM13P0DJ93 91 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 GNGT1P63211 74 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 HAMPP81172 84 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 Q5BKY6 102 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 SPATA8Q6RVD6 105 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 UBE2D4Q9Y2X8 147 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 LRRC37A2A6NM11 1700 aa1.63□□□□□ -2.15
SCFD1-211ENST00000554437 UGGT2Q9NYU1 1516 aa1.62□□□□□ -2.15
SCFD1-211ENST00000554437 K7EIL1 84 aa1.62□□□□□ -2.15
SCFD1-211ENST00000554437 ANGP03950 147 aaKnown RBP1.62□□□□□ -2.15
SCFD1-211ENST00000554437 DEFB121Q5J5C9 76 aa1.62□□□□□ -2.15
SCFD1-211ENST00000554437 C6orf201Q7Z4U5 140 aa1.62□□□□□ -2.15
SCFD1-211ENST00000554437 PROK2Q9HC23 129 aa1.62□□□□□ -2.15
SCFD1-211ENST00000554437 PLAC8Q9NZF1 115 aa1.62□□□□□ -2.15
SCFD1-211ENST00000554437 ABCA8O94911 1581 aa1.62□□□□□ -2.15
SCFD1-211ENST00000554437 MAP2P11137 1827 aaKnown RBP1.61□□□□□ -2.15
SCFD1-211ENST00000554437 Q6ZSA8 131 aa1.61□□□□□ -2.15
SCFD1-211ENST00000554437 C1orf167Q5SNV9 1468 aa1.61□□□□□ -2.15
SCFD1-211ENST00000554437 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-211ENST00000554437 NUP188Q5SRE5 1749 aa1.6□□□□□ -2.15
SCFD1-211ENST00000554437 TRBV6-1A0A0K0K1D8 114 aa1.6□□□□□ -2.15
SCFD1-211ENST00000554437 SPINK7P58062 85 aa1.6□□□□□ -2.15
SCFD1-211ENST00000554437 HEPN1Q6WQI6 88 aa1.6□□□□□ -2.15
SCFD1-211ENST00000554437 ADAMTS12P58397 1594 aa1.59□□□□□ -2.15
SCFD1-211ENST00000554437 LAMA4Q16363 1823 aa1.59□□□□□ -2.15
SCFD1-211ENST00000554437 UMAD1C9J7I0 102 aa1.59□□□□□ -2.15
SCFD1-211ENST00000554437 MYH4Q9Y623 1939 aa1.59□□□□□ -2.15
SCFD1-211ENST00000554437 KNDC1Q76NI1 1749 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms