RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CRPP02741 224 aa8.67□□□□□ -1.02
SHMT2-211ENST00000554310 COX8AP10176 69 aa8.67□□□□□ -1.02
SHMT2-211ENST00000554310 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
SHMT2-211ENST00000554310 ERASQ7Z444 233 aa8.67□□□□□ -1.02
SHMT2-211ENST00000554310 CYSLTR1Q9Y271 337 aa8.67□□□□□ -1.02
SHMT2-211ENST00000554310 IGKV2D-24A0A075B6R9 120 aa8.66□□□□□ -1.02
SHMT2-211ENST00000554310 DPM2O94777 84 aa8.66□□□□□ -1.02
SHMT2-211ENST00000554310 IGKCP01834 107 aa8.66□□□□□ -1.02
SHMT2-211ENST00000554310 GCSHP23434 173 aa8.66□□□□□ -1.02
SHMT2-211ENST00000554310 ANKRD39Q53RE8 183 aa8.66□□□□□ -1.02
SHMT2-211ENST00000554310 MAPKAPK5-AS1Q8N8E1 139 aa8.66□□□□□ -1.02
SHMT2-211ENST00000554310 ANGP03950 147 aaKnown RBP8.65□□□□□ -1.02
SHMT2-211ENST00000554310 WFDC2Q14508 124 aa8.65□□□□□ -1.02
SHMT2-211ENST00000554310 C1orf43Q9BWL3 253 aa8.65□□□□□ -1.02
SHMT2-211ENST00000554310 ABCA13Q86UQ4 5058 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 F8VRH5 84 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 I3L3M4 83 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 DLEU1O43261 78 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 PLNP26678 52 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 KRTAP10-1P60331 282 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 RBX1P62877 108 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 GAGE6Q13070 117 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 MIAQ16674 131 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 TIMM17AQ99595 171 aa8.64□□□□□ -1.03
SHMT2-211ENST00000554310 IGIPA6NJ69 53 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 TSHBP01222 138 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 FGF6P10767 208 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 COTL1Q14019 142 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 ENHOQ6UWT2 76 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 Q8N1X5 172 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 STPG4Q8N801 248 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 BAALCQ8WXS3 180 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 TMEM243Q9BU79 118 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
SHMT2-211ENST00000554310 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
SHMT2-211ENST00000554310 LECT2O14960 151 aa8.62□□□□□ -1.03
SHMT2-211ENST00000554310 BOD1L2Q8IYS8 172 aa8.62□□□□□ -1.03
SHMT2-211ENST00000554310 CHTOPQ9Y3Y2 248 aaKnown RBP8.62□□□□□ -1.03
SHMT2-211ENST00000554310 A0A1B0GUV1 79 aa8.61□□□□□ -1.03
SHMT2-211ENST00000554310 C20orf203Q8NBC4 194 aa8.61□□□□□ -1.03
SHMT2-211ENST00000554310 A0A1B0GV90 55 aa8.6□□□□□ -1.03
SHMT2-211ENST00000554310 UBE2L6O14933 153 aa8.6□□□□□ -1.03
SHMT2-211ENST00000554310 PMVKQ15126 192 aa8.6□□□□□ -1.03
SHMT2-211ENST00000554310 C14orf177Q52M58 125 aa8.6□□□□□ -1.03
SHMT2-211ENST00000554310 COL5A1-AS1Q5SY13 56 aa8.6□□□□□ -1.03
SHMT2-211ENST00000554310 LINC00269Q8N2A0 174 aa8.6□□□□□ -1.03
SHMT2-211ENST00000554310 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-211ENST00000554310 XGP55808 180 aa8.59□□□□□ -1.03
SHMT2-211ENST00000554310 RPL39P62891 51 aaKnown RBP8.59□□□□□ -1.03
SHMT2-211ENST00000554310 BATFQ16520 125 aa8.59□□□□□ -1.03
SHMT2-211ENST00000554310 PAPPA-AS1Q5QFB9 102 aa8.59□□□□□ -1.03
SHMT2-211ENST00000554310 ZC2HC1BQ5TFG8 222 aa8.59□□□□□ -1.03
SHMT2-211ENST00000554310 CLPSL2Q6UWE3 100 aa8.59□□□□□ -1.03
SHMT2-211ENST00000554310 C2orf91Q6ZV80 131 aa8.59□□□□□ -1.03
SHMT2-211ENST00000554310 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
SHMT2-211ENST00000554310 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
SHMT2-211ENST00000554310 NPSP0C0P6 89 aa8.58□□□□□ -1.04
SHMT2-211ENST00000554310 NMUP48645 174 aa8.58□□□□□ -1.04
SHMT2-211ENST00000554310 HINT1P49773 126 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-211ENST00000554310 REG3AQ06141 175 aa8.58□□□□□ -1.04
SHMT2-211ENST00000554310 IGKV2D-26A0A0A0MRZ7 120 aa8.57□□□□□ -1.04
SHMT2-211ENST00000554310 H7C423 109 aa8.57□□□□□ -1.04
SHMT2-211ENST00000554310 DEFB104AQ8WTQ1 72 aa8.57□□□□□ -1.04
SHMT2-211ENST00000554310 CST9LQ9H4G1 147 aa8.57□□□□□ -1.04
SHMT2-211ENST00000554310 PYGO1Q9Y3Y4 419 aa8.57□□□□□ -1.04
SHMT2-211ENST00000554310 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
SHMT2-211ENST00000554310 TRAV8-4A0A0B4J246 113 aa8.56□□□□□ -1.04
SHMT2-211ENST00000554310 PCP2Q8IVA1 136 aa8.56□□□□□ -1.04
SHMT2-211ENST00000554310 HIGD1BQ9P298 99 aa8.56□□□□□ -1.04
SHMT2-211ENST00000554310 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
SHMT2-211ENST00000554310 USP17L23D6RBM5 183 aa8.55□□□□□ -1.04
SHMT2-211ENST00000554310 BVES-AS1Q5T3Y7 98 aa8.55□□□□□ -1.04
SHMT2-211ENST00000554310 AMMECR1LQ6DCA0 310 aa8.55□□□□□ -1.04
SHMT2-211ENST00000554310 KRTAP26-1Q6PEX3 210 aa8.55□□□□□ -1.04
SHMT2-211ENST00000554310 Q6ZSA8 131 aa8.55□□□□□ -1.04
SHMT2-211ENST00000554310 EPM2AB3EWF7 344 aa8.54□□□□□ -1.04
SHMT2-211ENST00000554310 E9PLD3 99 aa8.54□□□□□ -1.04
SHMT2-211ENST00000554310 SPANXA1Q9NS26 97 aa8.54□□□□□ -1.04
SHMT2-211ENST00000554310 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
SHMT2-211ENST00000554310 IGLV4-3A0A075B6K6 122 aa8.53□□□□□ -1.04
SHMT2-211ENST00000554310 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-211ENST00000554310 IGKV2-29A2NJV5 120 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-211ENST00000554310 C11orf86A6NJI1 115 aa8.53□□□□□ -1.04
SHMT2-211ENST00000554310 ZNF25P17030 456 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-211ENST00000554310 HSD52Q0P140 79 aa8.53□□□□□ -1.04
SHMT2-211ENST00000554310 HERVK_113P61574 105 aa8.52□□□□□ -1.05
SHMT2-211ENST00000554310 SEC11AP67812 179 aa8.52□□□□□ -1.05
SHMT2-211ENST00000554310 AMELXQ99217 191 aa8.52□□□□□ -1.05
SHMT2-211ENST00000554310 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.05
SHMT2-211ENST00000554310 DNAH8Q96JB1 4490 aa8.52□□□□□ -1.05
SHMT2-211ENST00000554310 HAMPP81172 84 aa8.51□□□□□ -1.05
SHMT2-211ENST00000554310 Q5VSD8 79 aa8.51□□□□□ -1.05
SHMT2-211ENST00000554310 VCX2Q9H322 139 aa8.51□□□□□ -1.05
SHMT2-211ENST00000554310 FAM30AQ9NZY2 134 aa8.51□□□□□ -1.05
SHMT2-211ENST00000554310 UBE2D4Q9Y2X8 147 aa8.51□□□□□ -1.05
SHMT2-211ENST00000554310 LINC01620Q4KN68 170 aa8.5□□□□□ -1.05
SHMT2-211ENST00000554310 DGAT2L7PQ6IED9 249 aa8.5□□□□□ -1.05
SHMT2-211ENST00000554310 FAM104AQ969W3 186 aa8.5□□□□□ -1.05
SHMT2-211ENST00000554310 TMEM101Q96IK0 257 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms