RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
SLIRP-203ENST00000554074 A0A087WYN8 130 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 GVQW2A0A096LPI5 108 aaPredicted RBP4.2□□□□□ -1.74
SLIRP-203ENST00000554074 GAGE12HA6NDE8 117 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 COLCA2A8K830 154 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 FGF6P10767 208 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 HNRNPA3P51991 378 aaKnown RBP4.2□□□□□ -1.74
SLIRP-203ENST00000554074 MRPS36P82909 103 aaKnown RBP4.2□□□□□ -1.74
SLIRP-203ENST00000554074 KIAA1644Q3SXP7 199 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 PAPPA-AS1Q5QFB9 102 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 OR5A1Q8NGJ0 315 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 PRSS3P2Q8NHM4 247 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 PLAC8Q9NZF1 115 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 PKIGQ9Y2B9 76 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
SLIRP-203ENST00000554074 LRP1Q07954 4544 aaKnown RBP4.2□□□□□ -1.74
SLIRP-203ENST00000554074 ATP6V1G1O75348 118 aa4.19□□□□□ -1.74
SLIRP-203ENST00000554074 IFI27P40305 119 aaPredicted RBP4.19□□□□□ -1.74
SLIRP-203ENST00000554074 RNASEKQ6P5S7 137 aaKnown RBP4.19□□□□□ -1.74
SLIRP-203ENST00000554074 FA2HQ7L5A8 372 aa4.19□□□□□ -1.74
SLIRP-203ENST00000554074 CHCHD10Q8WYQ3 142 aaPredicted RBP4.19□□□□□ -1.74
SLIRP-203ENST00000554074 CYSLTR1Q9Y271 337 aa4.19□□□□□ -1.74
SLIRP-203ENST00000554074 FAT3Q8TDW7 4589 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.18□□□□□ -1.74
SLIRP-203ENST00000554074 LOC389332A0A1B0GUA5 103 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 IGKV2-29A2NJV5 120 aaPredicted RBP4.18□□□□□ -1.74
SLIRP-203ENST00000554074 LINC00614P0C842 121 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 CHTF8P0CG12 524 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 COX6A2Q02221 97 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 FOXI1Q12951 378 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 ZNF664Q8N3J9 261 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 C18orf32Q8TCD1 76 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 CHCHD1Q96BP2 118 aaKnown RBP4.18□□□□□ -1.74
SLIRP-203ENST00000554074 DPH3Q96FX2 82 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 TIMM17AQ99595 171 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 CDC42SE2Q9NRR3 84 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 UBE2D4Q9Y2X8 147 aa4.18□□□□□ -1.74
SLIRP-203ENST00000554074 IGHV1-58A0A0C4DH39 117 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 IGKV3OR2-268A0A0C4DH90 116 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 LINC00959A0A1B0GUT2 108 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 A6NJY4 79 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 C1orf196B1AJZ1 125 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 TRGC2P03986 189 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 SS18Q15532 418 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 HIGD2BQ4VC39 106 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 C2orf66Q6UXQ4 117 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 C7orf33Q8WU49 177 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 TOMM6Q96B49 74 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 TMEM141Q96I45 108 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 LINC00474Q9P2X8 69 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 PLA2G2DQ9UNK4 145 aa4.17□□□□□ -1.74
SLIRP-203ENST00000554074 XCL1P47992 114 aa4.16□□□□□ -1.74
SLIRP-203ENST00000554074 SEC11AP67812 179 aa4.16□□□□□ -1.74
SLIRP-203ENST00000554074 CD164L2Q6UWJ8 174 aa4.16□□□□□ -1.74
SLIRP-203ENST00000554074 Q6ZN92 141 aa4.16□□□□□ -1.74
SLIRP-203ENST00000554074 ERASQ7Z444 233 aa4.16□□□□□ -1.74
SLIRP-203ENST00000554074 A0A096LNI7 61 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 IGIPA6NJ69 53 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 SCO1O75880 301 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 ATP5LO75964 103 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 HBDP02042 147 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 RPL39P62891 51 aaKnown RBP4.15□□□□□ -1.75
SLIRP-203ENST00000554074 PRR3P79522 188 aaKnown RBP4.15□□□□□ -1.75
SLIRP-203ENST00000554074 MAJINQ3KP22 176 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 TEX43Q6ZNM6 134 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 BAGE3Q86Y29 109 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 STPG4Q8N801 248 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 CARD19Q96LW7 228 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 SCGB3A1Q96QR1 104 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 AMELXQ99217 191 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 C2orf88Q9BSF0 95 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 VCX2Q9H322 139 aa4.15□□□□□ -1.75
SLIRP-203ENST00000554074 IGLV4-3A0A075B6K6 122 aa4.14□□□□□ -1.75
SLIRP-203ENST00000554074 IGKV2-24A0A0C4DH68 120 aa4.14□□□□□ -1.75
SLIRP-203ENST00000554074 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.14□□□□□ -1.75
SLIRP-203ENST00000554074 ZNF561-AS1K7EIQ3 104 aa4.14□□□□□ -1.75
SLIRP-203ENST00000554074 SYCNQ0VAF6 134 aa4.14□□□□□ -1.75
SLIRP-203ENST00000554074 FAM19A3Q7Z5A8 133 aa4.14□□□□□ -1.75
SLIRP-203ENST00000554074 LINC01561Q8N1V8 128 aa4.14□□□□□ -1.75
SLIRP-203ENST00000554074 PACRGQ96M98 296 aaPredicted RBP4.14□□□□□ -1.75
SLIRP-203ENST00000554074 IFITM10A6NMD0 228 aa4.13□□□□□ -1.75
SLIRP-203ENST00000554074 F8WDY8 70 aa4.13□□□□□ -1.75
SLIRP-203ENST00000554074 COX7A2LO14548 114 aa4.13□□□□□ -1.75
SLIRP-203ENST00000554074 HSBP1O75506 76 aa4.13□□□□□ -1.75
SLIRP-203ENST00000554074 PDZD11Q5EBL8 140 aa4.13□□□□□ -1.75
SLIRP-203ENST00000554074 SPINK6Q6UWN8 80 aa4.13□□□□□ -1.75
SLIRP-203ENST00000554074 Q6ZUT4 128 aa4.13□□□□□ -1.75
SLIRP-203ENST00000554074 URB1-AS1Q96HZ7 61 aa4.13□□□□□ -1.75
SLIRP-203ENST00000554074 LINC01600Q96MT4 127 aa4.13□□□□□ -1.75
SLIRP-203ENST00000554074 IGLV4-69A0A075B6H9 119 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 TRAV13-1A0A0B4J241 112 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 LOC107984640A0A0U1RRK4 108 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST1H2BKO60814 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 APOMO95445 188 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST1H2BJP06899 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 MALP21145 153 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST1H2BOP23527 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 HIST1H2BBP33778 126 aa4.12□□□□□ -1.75
SLIRP-203ENST00000554074 PTTG1IPP53801 180 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms