RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 DEFA5Q01523 94 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 PLGLAQ15195 96 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 SPRR4Q96PI1 79 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 LINC00846Q9NV44 126 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 KDM5DQ9BY66 1539 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 MYOM1P52179 1685 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 IFT172Q9UG01 1749 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 PSME4Q14997 1843 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 PARP14Q460N5 1801 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 DOCK2Q92608 1830 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 TENM1Q9UKZ4 2725 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 SORL1Q92673 2214 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 INTS1Q8N201 2190 aaKnown RBP0.76□□□□□ -2.29
SRP54-204ENST00000553923 KIF21AQ7Z4S6 1674 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 SSC5DA1L4H1 1573 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 ARHGEF5Q12774 1597 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 ABCC2Q92887 1545 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 FANCAO15360 1455 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 ERVK-7P63135 1459 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 MAGI2Q86UL8 1455 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 CEBPZOSA8MTT3 80 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 ARL14EPLP0DKL9 152 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 BVES-AS1Q5T3Y7 98 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 SMCO4Q9NRQ5 59 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 CACNA1BQ00975 2339 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 MED13Q9UHV7 2174 aa0.76□□□□□ -2.29
SRP54-204ENST00000553923 CLTCQ00610 1675 aaKnown RBP0.75□□□□□ -2.29
SRP54-204ENST00000553923 ERCC6L2Q5T890 1561 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 DIP2CQ9Y2E4 1556 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 NEXMIFQ5QGS0 1516 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 NLRP1Q9C000 1473 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 A0A087WXM4 84 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 A0A1B0GU69 56 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 SPINK7P58062 85 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 TANC1Q9C0D5 1861 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 ZNF236Q9UL36 1845 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 LOC285556D6RIA3 1793 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 COL4A6Q14031 1691 aa0.75□□□□□ -2.29
SRP54-204ENST00000553923 SNRNP200O75643 2136 aaKnown RBP0.74□□□□□ -2.29
SRP54-204ENST00000553923 RRBP1Q9P2E9 1410 aaKnown RBP0.74□□□□□ -2.29
SRP54-204ENST00000553923 FXYD6-FXYD2A0A087WZ82 144 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 A0A1B0GUT8 65 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 PDCD5O14737 125 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 SMIM13P0DJ93 91 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 IGLC2P0DOY2 106 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 IGLC3P0DOY3 106 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 KRTAP10-4P60372 401 aaPredicted RBP0.74□□□□□ -2.29
SRP54-204ENST00000553923 SPATA8Q6RVD6 105 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 SCN7AQ01118 1682 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 KIF14Q15058 1648 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 DLG5Q8TDM6 1919 aa0.74□□□□□ -2.29
SRP54-204ENST00000553923 C1orf167Q5SNV9 1468 aa0.73□□□□□ -2.29
SRP54-204ENST00000553923 PLXNA1Q9UIW2 1896 aa0.73□□□□□ -2.29
SRP54-204ENST00000553923 SPAG17Q6Q759 2223 aa0.73□□□□□ -2.29
SRP54-204ENST00000553923 ESPL1Q14674 2120 aa0.73□□□□□ -2.29
SRP54-204ENST00000553923 A0A0D9SFI3 127 aa0.73□□□□□ -2.29
SRP54-204ENST00000553923 COX6A2Q02221 97 aa0.73□□□□□ -2.29
SRP54-204ENST00000553923 DEFB112Q30KQ8 113 aa0.73□□□□□ -2.29
SRP54-204ENST00000553923 C18orf32Q8TCD1 76 aa0.73□□□□□ -2.29
SRP54-204ENST00000553923 UBE2D4Q9Y2X8 147 aa0.73□□□□□ -2.29
SRP54-204ENST00000553923 SIPA1L3O60292 1781 aaPredicted RBP0.73□□□□□ -2.29
SRP54-204ENST00000553923 GPR98Q8WXG9 6306 aa0.72□□□□□ -2.29
SRP54-204ENST00000553923 RAPGEF6Q8TEU7 1601 aa0.72□□□□□ -2.29
SRP54-204ENST00000553923 A0A0D9SG42 100 aa0.72□□□□□ -2.29
SRP54-204ENST00000553923 CFDP00746 253 aaPredicted RBP0.72□□□□□ -2.29
SRP54-204ENST00000553923 WFDC9Q8NEX5 89 aa0.72□□□□□ -2.29
SRP54-204ENST00000553923 SBF2Q86WG5 1849 aa0.72□□□□□ -2.29
SRP54-204ENST00000553923 DCAF1Q9Y4B6 1507 aa0.72□□□□□ -2.29
SRP54-204ENST00000553923 MYO3AQ8NEV4 1616 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 SDK1Q7Z5N4 2213 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 TRBV7-4A0A0J9YYF1 115 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 GAFA1Q96PS6 74 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 TP53AIP1Q9HCN2 124 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 PRO0255Q9UI72 69 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 LRRC37A2A6NM11 1700 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 KNDC1Q76NI1 1749 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 SUPT6HQ7KZ85 1726 aaKnown RBP0.71□□□□□ -2.3
SRP54-204ENST00000553923 ANKARQ7Z5J8 1434 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 NCOA6Q14686 2063 aaPredicted RBP0.71□□□□□ -2.3
SRP54-204ENST00000553923 LRP6O75581 1613 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 ABCA4P78363 2273 aa0.71□□□□□ -2.3
SRP54-204ENST00000553923 RGPD4Q7Z3J3 1758 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 MED12Q93074 2177 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 CUX1P39880 1505 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 MAP3K1Q13233 1512 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 TCHHQ07283 1943 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 LINC00959A0A1B0GUT2 108 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 UMAD1C9J7I0 102 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 H3BVH4 76 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 PIGYQ3MUY2 71 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 FAM103A1Q9BTL3 118 aaKnown RBP0.7□□□□□ -2.3
SRP54-204ENST00000553923 SPTBP11277 2137 aa0.7□□□□□ -2.3
SRP54-204ENST00000553923 TECTAO75443 2155 aa0.69□□□□□ -2.3
SRP54-204ENST00000553923 BTAF1O14981 1849 aa0.69□□□□□ -2.3
SRP54-204ENST00000553923 MAP3K4Q9Y6R4 1608 aa0.69□□□□□ -2.3
SRP54-204ENST00000553923 TRAV21A0A0B4J279 112 aa0.69□□□□□ -2.3
SRP54-204ENST00000553923 IFI27P40305 119 aaPredicted RBP0.69□□□□□ -2.3
SRP54-204ENST00000553923 PI4KAP42356 2102 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms