RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 TEX261Q6UWH6 196 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 Q6ZUT4 128 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 MANBALQ9NQG1 85 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 TRAV13-1A0A0B4J241 112 aa5.19□□□□□ -1.58
PRKCH-208ENST00000553846 NDUFA1O15239 70 aa5.19□□□□□ -1.58
PRKCH-208ENST00000553846 GAGE2EQ4V326 116 aa5.19□□□□□ -1.58
PRKCH-208ENST00000553846 NUDT10Q8NFP7 164 aa5.19□□□□□ -1.58
PRKCH-208ENST00000553846 ORAOV1Q8WV07 137 aa5.19□□□□□ -1.58
PRKCH-208ENST00000553846 NUDT11Q96G61 164 aa5.19□□□□□ -1.58
PRKCH-208ENST00000553846 GAGE2DQ9UEU5 116 aa5.19□□□□□ -1.58
PRKCH-208ENST00000553846 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
PRKCH-208ENST00000553846 HMSDA8MTL9 139 aa5.18□□□□□ -1.58
PRKCH-208ENST00000553846 CTAG1AP78358 180 aa5.18□□□□□ -1.58
PRKCH-208ENST00000553846 TMEM241Q24JQ0 296 aa5.18□□□□□ -1.58
PRKCH-208ENST00000553846 KRTAP13-1Q8IUC0 172 aa5.18□□□□□ -1.58
PRKCH-208ENST00000553846 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
PRKCH-208ENST00000553846 ANAPC11Q9NYG5 84 aa5.18□□□□□ -1.58
PRKCH-208ENST00000553846 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 NDUFC2-KCTD14E9PQ53 114 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 TEX46H3BTG2 121 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 K7EN84 100 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 NUPR1O60356 82 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 KRTAP13-3Q3SY46 172 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 LINC00173Q6ZV60 143 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 LINC00304Q8N9R0 145 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 TIMM21Q9BVV7 248 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 CTDSP1Q9GZU7 261 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 ST20Q9HBF5 79 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 MED9Q9NWA0 146 aa5.17□□□□□ -1.58
PRKCH-208ENST00000553846 MT1HP80294 61 aa5.16□□□□□ -1.58
PRKCH-208ENST00000553846 PPDPFQ9H3Y8 114 aa5.16□□□□□ -1.58
PRKCH-208ENST00000553846 TRBV30A0A0K0K1B3 111 aa5.15□□□□□ -1.59
PRKCH-208ENST00000553846 PDE6DO43924 150 aa5.15□□□□□ -1.59
PRKCH-208ENST00000553846 BCE1O60756 84 aa5.15□□□□□ -1.59
PRKCH-208ENST00000553846 FAM229BQ4G0N7 80 aa5.15□□□□□ -1.59
PRKCH-208ENST00000553846 NRACQ8N912 160 aa5.15□□□□□ -1.59
PRKCH-208ENST00000553846 BIN3Q9NQY0 253 aa5.15□□□□□ -1.59
PRKCH-208ENST00000553846 C22orf24Q9Y442 160 aa5.15□□□□□ -1.59
PRKCH-208ENST00000553846 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
PRKCH-208ENST00000553846 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.14□□□□□ -1.59
PRKCH-208ENST00000553846 RPL28P46779 137 aaKnown RBP5.14□□□□□ -1.59
PRKCH-208ENST00000553846 C2orf82Q6UX34 121 aa5.14□□□□□ -1.59
PRKCH-208ENST00000553846 SMIM15Q7Z3B0 74 aa5.14□□□□□ -1.59
PRKCH-208ENST00000553846 RAB4AP20338 218 aa5.13□□□□□ -1.59
PRKCH-208ENST00000553846 TP73-AS1Q9UF72 201 aa5.13□□□□□ -1.59
PRKCH-208ENST00000553846 H3BS24 57 aa5.12□□□□□ -1.59
PRKCH-208ENST00000553846 OCC1Q8TAD7 63 aa5.12□□□□□ -1.59
PRKCH-208ENST00000553846 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
PRKCH-208ENST00000553846 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
PRKCH-208ENST00000553846 SMKR1H3BMG3 65 aa5.11□□□□□ -1.59
PRKCH-208ENST00000553846 VCYO14598 125 aa5.11□□□□□ -1.59
PRKCH-208ENST00000553846 GATCO43716 136 aaKnown RBP5.11□□□□□ -1.59
PRKCH-208ENST00000553846 CEBPGP53567 150 aa5.11□□□□□ -1.59
PRKCH-208ENST00000553846 KRTAP10-6P60371 365 aaPredicted RBP5.11□□□□□ -1.59
PRKCH-208ENST00000553846 SUMO2P61956 95 aaKnown RBP5.11□□□□□ -1.59
PRKCH-208ENST00000553846 RPL39P62891 51 aaKnown RBP5.11□□□□□ -1.59
PRKCH-208ENST00000553846 MRPS36P82909 103 aaKnown RBP5.11□□□□□ -1.59
PRKCH-208ENST00000553846 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
PRKCH-208ENST00000553846 AMN1Q8IY45 258 aa5.11□□□□□ -1.59
PRKCH-208ENST00000553846 FCER1GP30273 86 aa5.1□□□□□ -1.59
PRKCH-208ENST00000553846 CT83Q5H943 113 aa5.1□□□□□ -1.59
PRKCH-208ENST00000553846 BORCS7Q96B45 105 aa5.1□□□□□ -1.59
PRKCH-208ENST00000553846 PACRGQ96M98 296 aaPredicted RBP5.1□□□□□ -1.59
PRKCH-208ENST00000553846 TAGLN2P37802 199 aaKnown RBP5.09□□□□□ -1.59
PRKCH-208ENST00000553846 SMAGPQ0VAQ4 97 aa5.09□□□□□ -1.59
PRKCH-208ENST00000553846 LBHQ53QV2 105 aaPredicted RBP5.09□□□□□ -1.59
PRKCH-208ENST00000553846 FAM231DQ6ZW35 169 aa5.09□□□□□ -1.59
PRKCH-208ENST00000553846 MRPL55Q7Z7F7 128 aaKnown RBP5.09□□□□□ -1.59
PRKCH-208ENST00000553846 SLC51BQ86UW2 128 aa5.09□□□□□ -1.59
PRKCH-208ENST00000553846 XAGE1AQ9HD64 81 aa5.09□□□□□ -1.59
PRKCH-208ENST00000553846 SPANXA1Q9NS26 97 aa5.09□□□□□ -1.59
PRKCH-208ENST00000553846 ZNF727A8MUV8 499 aa5.08□□□□□ -1.6
PRKCH-208ENST00000553846 A8MWL6 223 aa5.08□□□□□ -1.6
PRKCH-208ENST00000553846 TNFRSF6BO95407 300 aa5.08□□□□□ -1.6
PRKCH-208ENST00000553846 CFC1BP0CG36 223 aa5.08□□□□□ -1.6
PRKCH-208ENST00000553846 RPL32P62910 135 aaKnown RBP5.08□□□□□ -1.6
PRKCH-208ENST00000553846 LINC00469Q8N7U9 141 aa5.08□□□□□ -1.6
PRKCH-208ENST00000553846 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
PRKCH-208ENST00000553846 A0A1B0GUT8 65 aa5.07□□□□□ -1.6
PRKCH-208ENST00000553846 IFITM10A6NMD0 228 aa5.07□□□□□ -1.6
PRKCH-208ENST00000553846 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
PRKCH-208ENST00000553846 HBBP68871 147 aa5.07□□□□□ -1.6
PRKCH-208ENST00000553846 XP32Q5T750 250 aa5.07□□□□□ -1.6
PRKCH-208ENST00000553846 LINC01561Q8N1V8 128 aa5.07□□□□□ -1.6
PRKCH-208ENST00000553846 C3orf22Q8N5N4 141 aa5.07□□□□□ -1.6
PRKCH-208ENST00000553846 LINC00167Q96N53 147 aa5.07□□□□□ -1.6
PRKCH-208ENST00000553846 KIR2DL4Q99706 377 aa5.07□□□□□ -1.6
PRKCH-208ENST00000553846 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
PRKCH-208ENST00000553846 TRBV24-1A0A075B6N3 115 aa5.06□□□□□ -1.6
PRKCH-208ENST00000553846 TGIF2-C20orf24A0A0A6YYL0 155 aa5.06□□□□□ -1.6
PRKCH-208ENST00000553846 HIGD1CA8MV81 97 aa5.06□□□□□ -1.6
PRKCH-208ENST00000553846 ANKRD39Q53RE8 183 aa5.06□□□□□ -1.6
PRKCH-208ENST00000553846 ALKAL2Q6UX46 152 aa5.06□□□□□ -1.6
PRKCH-208ENST00000553846 IGKV2D-26A0A0A0MRZ7 120 aa5.05□□□□□ -1.6
PRKCH-208ENST00000553846 RPL37AP8A6NKH3 93 aa5.05□□□□□ -1.6
PRKCH-208ENST00000553846 TMEM250H0YL14 139 aa5.05□□□□□ -1.6
PRKCH-208ENST00000553846 PPP1R2P9O14990 202 aa5.05□□□□□ -1.6
PRKCH-208ENST00000553846 PPP1R17O96001 155 aa5.05□□□□□ -1.6
PRKCH-208ENST00000553846 C21orf62-AS1Q17RA5 79 aa5.05□□□□□ -1.6
PRKCH-208ENST00000553846 TCTE3Q8IZS6 198 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms