RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 TCAPO15273 167 aa10.62□□□□□ -0.71
SYNE2-211ENST00000553801 C10orf25Q5T742 122 aa10.62□□□□□ -0.71
SYNE2-211ENST00000553801 UNQ6190/PRO20217Q6UXQ8 127 aa10.62□□□□□ -0.71
SYNE2-211ENST00000553801 SMDT1Q9H4I9 107 aa10.62□□□□□ -0.71
SYNE2-211ENST00000553801 CARHSP1Q9Y2V2 147 aaKnown RBP10.62□□□□□ -0.71
SYNE2-211ENST00000553801 M0QXV9 152 aa10.61□□□□□ -0.71
SYNE2-211ENST00000553801 OSTCQ9NRP0 149 aa10.61□□□□□ -0.71
SYNE2-211ENST00000553801 C6orf48Q9UBA6 75 aa10.61□□□□□ -0.71
SYNE2-211ENST00000553801 BLOC1S1P78537 153 aa10.6□□□□□ -0.71
SYNE2-211ENST00000553801 SMIM7Q9BQ49 75 aa10.6□□□□□ -0.71
SYNE2-211ENST00000553801 C20orf78Q9BR46 151 aa10.6□□□□□ -0.71
SYNE2-211ENST00000553801 LINC01551Q86U37 167 aa10.59□□□□□ -0.71
SYNE2-211ENST00000553801 SPANXA1Q9NS26 97 aa10.59□□□□□ -0.71
SYNE2-211ENST00000553801 LINC00862A6NCI5 91 aa10.58□□□□□ -0.72
SYNE2-211ENST00000553801 RPL39P62891 51 aaKnown RBP10.58□□□□□ -0.72
SYNE2-211ENST00000553801 RPL32P62910 135 aaKnown RBP10.58□□□□□ -0.72
SYNE2-211ENST00000553801 HBBP68871 147 aa10.58□□□□□ -0.72
SYNE2-211ENST00000553801 MRPS36P82909 103 aaKnown RBP10.58□□□□□ -0.72
SYNE2-211ENST00000553801 TGIF2-C20orf24A0A0A6YYL0 155 aa10.57□□□□□ -0.72
SYNE2-211ENST00000553801 IFITM10A6NMD0 228 aa10.57□□□□□ -0.72
SYNE2-211ENST00000553801 MRPL51Q4U2R6 128 aaKnown RBP10.57□□□□□ -0.72
SYNE2-211ENST00000553801 FAM104BQ5XKR9 115 aa10.57□□□□□ -0.72
SYNE2-211ENST00000553801 KRTAP7-1Q8IUC3 87 aa10.57□□□□□ -0.72
SYNE2-211ENST00000553801 TRBV24-1A0A075B6N3 115 aa10.56□□□□□ -0.72
SYNE2-211ENST00000553801 TRBV30A0A0K0K1B3 111 aa10.56□□□□□ -0.72
SYNE2-211ENST00000553801 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
SYNE2-211ENST00000553801 ZNF861PO60384 105 aa10.55□□□□□ -0.72
SYNE2-211ENST00000553801 CKS2P33552 79 aa10.55□□□□□ -0.72
SYNE2-211ENST00000553801 TCTE3Q8IZS6 198 aa10.55□□□□□ -0.72
SYNE2-211ENST00000553801 FAM104AQ969W3 186 aa10.55□□□□□ -0.72
SYNE2-211ENST00000553801 NAT8BQ9UHF3 227 aa10.55□□□□□ -0.72
SYNE2-211ENST00000553801 V9GYV3 84 aa10.55□□□□□ -0.72
SYNE2-211ENST00000553801 NDUFC2-KCTD14E9PQ53 114 aa10.54□□□□□ -0.72
SYNE2-211ENST00000553801 KIAA0087Q14695 138 aa10.54□□□□□ -0.72
SYNE2-211ENST00000553801 PACRGQ96M98 296 aaPredicted RBP10.54□□□□□ -0.72
SYNE2-211ENST00000553801 EIF5A2Q9GZV4 153 aaKnown RBP10.54□□□□□ -0.72
SYNE2-211ENST00000553801 TSPAN13O95857 204 aa10.53□□□□□ -0.72
SYNE2-211ENST00000553801 SMIM2Q9BVW6 85 aa10.53□□□□□ -0.72
SYNE2-211ENST00000553801 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
SYNE2-211ENST00000553801 C9orf129Q5T035 196 aaKnown RBP10.52□□□□□ -0.73
SYNE2-211ENST00000553801 A0A1B0GW15 77 aa10.51□□□□□ -0.73
SYNE2-211ENST00000553801 NUPR1O60356 82 aa10.51□□□□□ -0.73
SYNE2-211ENST00000553801 FAM74A3Q4VXF1 159 aa10.5□□□□□ -0.73
SYNE2-211ENST00000553801 ALKAL2Q6UX46 152 aa10.5□□□□□ -0.73
SYNE2-211ENST00000553801 IFI27P40305 119 aaPredicted RBP10.49□□□□□ -0.73
SYNE2-211ENST00000553801 LBHQ53QV2 105 aaPredicted RBP10.49□□□□□ -0.73
SYNE2-211ENST00000553801 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
SYNE2-211ENST00000553801 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
SYNE2-211ENST00000553801 LCE2AQ5TA79 106 aaPredicted RBP10.48□□□□□ -0.73
SYNE2-211ENST00000553801 LINC01561Q8N1V8 128 aa10.48□□□□□ -0.73
SYNE2-211ENST00000553801 D6R8Y8 96 aa10.47□□□□□ -0.73
SYNE2-211ENST00000553801 SRP19P09132 144 aaKnown RBP10.47□□□□□ -0.73
SYNE2-211ENST00000553801 RAB5AP20339 215 aa10.47□□□□□ -0.73
SYNE2-211ENST00000553801 PYGO1Q9Y3Y4 419 aa10.47□□□□□ -0.73
SYNE2-211ENST00000553801 C22orf24Q9Y442 160 aa10.47□□□□□ -0.73
SYNE2-211ENST00000553801 SMIM27A0A1W2PRY6 76 aa10.46□□□□□ -0.73
SYNE2-211ENST00000553801 F8W036 122 aa10.46□□□□□ -0.73
SYNE2-211ENST00000553801 S100A8P05109 93 aa10.46□□□□□ -0.73
SYNE2-211ENST00000553801 CRYGAP11844 174 aa10.46□□□□□ -0.73
SYNE2-211ENST00000553801 CTDSP1Q9GZU7 261 aa10.46□□□□□ -0.73
SYNE2-211ENST00000553801 NPYP01303 97 aa10.45□□□□□ -0.74
SYNE2-211ENST00000553801 PPBPP02775 128 aa10.45□□□□□ -0.74
SYNE2-211ENST00000553801 PRSS2P07478 247 aa10.45□□□□□ -0.74
SYNE2-211ENST00000553801 RPL28P46779 137 aaKnown RBP10.45□□□□□ -0.74
SYNE2-211ENST00000553801 TYMSOSQ8TAI1 123 aa10.45□□□□□ -0.74
SYNE2-211ENST00000553801 TMEM141Q96I45 108 aa10.45□□□□□ -0.74
SYNE2-211ENST00000553801 IGLV4-3A0A075B6K6 122 aa10.44□□□□□ -0.74
SYNE2-211ENST00000553801 CKS1BP61024 79 aa10.44□□□□□ -0.74
SYNE2-211ENST00000553801 RPL23P62829 140 aaKnown RBP10.44□□□□□ -0.74
SYNE2-211ENST00000553801 FAT4Q6V0I7 4981 aa10.43□□□□□ -0.74
SYNE2-211ENST00000553801 KRTAP9-6A0A140TA67 174 aa10.43□□□□□ -0.74
SYNE2-211ENST00000553801 ADIRFQ15847 76 aa10.43□□□□□ -0.74
SYNE2-211ENST00000553801 Q6ZN92 141 aa10.43□□□□□ -0.74
SYNE2-211ENST00000553801 TEX43Q6ZNM6 134 aa10.43□□□□□ -0.74
SYNE2-211ENST00000553801 C2orf88Q9BSF0 95 aa10.43□□□□□ -0.74
SYNE2-211ENST00000553801 A0A087X002 238 aa10.42□□□□□ -0.74
SYNE2-211ENST00000553801 C6orf226Q5I0X4 101 aa10.42□□□□□ -0.74
SYNE2-211ENST00000553801 LINC00469Q8N7U9 141 aa10.42□□□□□ -0.74
SYNE2-211ENST00000553801 TOMM7Q9P0U1 55 aa10.42□□□□□ -0.74
SYNE2-211ENST00000553801 TP73-AS1Q9UF72 201 aa10.41□□□□□ -0.74
SYNE2-211ENST00000553801 BCE1O60756 84 aa10.4□□□□□ -0.74
SYNE2-211ENST00000553801 MRPL54Q6P161 138 aaKnown RBP10.4□□□□□ -0.74
SYNE2-211ENST00000553801 MRPL55Q7Z7F7 128 aaKnown RBP10.4□□□□□ -0.74
SYNE2-211ENST00000553801 ORMDL3Q8N138 153 aa10.4□□□□□ -0.74
SYNE2-211ENST00000553801 XAGE1AQ9HD64 81 aa10.4□□□□□ -0.74
SYNE2-211ENST00000553801 NAT8Q9UHE5 227 aa10.4□□□□□ -0.74
SYNE2-211ENST00000553801 TMEM136Q6ZRR5 245 aa10.39□□□□□ -0.75
SYNE2-211ENST00000553801 Q8IZM0 81 aa10.39□□□□□ -0.75
SYNE2-211ENST00000553801 PRELID3AQ96N28 172 aa10.38□□□□□ -0.75
SYNE2-211ENST00000553801 ALKBH7Q9BT30 221 aaPredicted RBP10.38□□□□□ -0.75
SYNE2-211ENST00000553801 A0A1B0GXF2 115 aa10.37□□□□□ -0.75
SYNE2-211ENST00000553801 VCX2Q9H322 139 aa10.37□□□□□ -0.75
SYNE2-211ENST00000553801 CDIP1Q9H305 208 aa10.36□□□□□ -0.75
SYNE2-211ENST00000553801 CYSLTR1Q9Y271 337 aa10.36□□□□□ -0.75
SYNE2-211ENST00000553801 AMELXQ99217 191 aa10.35□□□□□ -0.75
SYNE2-211ENST00000553801 PRSS47A8MTI9 375 aa10.34□□□□□ -0.75
SYNE2-211ENST00000553801 F8VRH5 84 aa10.34□□□□□ -0.75
SYNE2-211ENST00000553801 NPSP0C0P6 89 aa10.34□□□□□ -0.75
SYNE2-211ENST00000553801 ZC2HC1BQ5TFG8 222 aa10.34□□□□□ -0.75
SYNE2-211ENST00000553801 C2orf66Q6UXQ4 117 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms