RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 MT1HP80294 61 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 Q6ZUT4 128 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 NUDT10Q8NFP7 164 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 S100ZQ8WXG8 99 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 C11orf52Q96A22 123 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 NUDT11Q96G61 164 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 TRBV30A0A0K0K1B3 111 aa7.84□□□□□ -1.15
PRPF39-204ENST00000553605 CCL20P78556 96 aa7.84□□□□□ -1.15
PRPF39-204ENST00000553605 FP248Q71RG6 208 aaPredicted RBP7.84□□□□□ -1.15
PRPF39-204ENST00000553605 FAM213BQ8TBF2 198 aa7.84□□□□□ -1.15
PRPF39-204ENST00000553605 BIN3Q9NQY0 253 aa7.84□□□□□ -1.15
PRPF39-204ENST00000553605 FXYD6-FXYD2A0A087WZ82 144 aa7.83□□□□□ -1.16
PRPF39-204ENST00000553605 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
PRPF39-204ENST00000553605 FCER1GP30273 86 aa7.83□□□□□ -1.16
PRPF39-204ENST00000553605 KIAA0087Q14695 138 aa7.83□□□□□ -1.16
PRPF39-204ENST00000553605 LINC00299Q6ZSB3 139 aa7.83□□□□□ -1.16
PRPF39-204ENST00000553605 PACRGQ96M98 296 aaPredicted RBP7.82□□□□□ -1.16
PRPF39-204ENST00000553605 VCYO14598 125 aa7.81□□□□□ -1.16
PRPF39-204ENST00000553605 C2orf82Q6UX34 121 aa7.81□□□□□ -1.16
PRPF39-204ENST00000553605 MRPL55Q7Z7F7 128 aaKnown RBP7.8□□□□□ -1.16
PRPF39-204ENST00000553605 TIMM21Q9BVV7 248 aa7.8□□□□□ -1.16
PRPF39-204ENST00000553605 TRBV20OR9-2A0A075B6H5 130 aa7.79□□□□□ -1.16
PRPF39-204ENST00000553605 ZNF727A8MUV8 499 aa7.79□□□□□ -1.16
PRPF39-204ENST00000553605 UMAD1C9J7I0 102 aa7.79□□□□□ -1.16
PRPF39-204ENST00000553605 H2AFB1P0C5Y9 115 aa7.79□□□□□ -1.16
PRPF39-204ENST00000553605 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
PRPF39-204ENST00000553605 KRTAP19-2Q3LHN2 52 aa7.79□□□□□ -1.16
PRPF39-204ENST00000553605 LINC00469Q8N7U9 141 aa7.79□□□□□ -1.16
PRPF39-204ENST00000553605 GNG13Q9P2W3 67 aa7.79□□□□□ -1.16
PRPF39-204ENST00000553605 C4orf48Q5BLP8 95 aa7.78□□□□□ -1.16
PRPF39-204ENST00000553605 TMEM18Q96B42 140 aa7.78□□□□□ -1.16
PRPF39-204ENST00000553605 XAGE1AQ9HD64 81 aa7.78□□□□□ -1.16
PRPF39-204ENST00000553605 MANBALQ9NQG1 85 aa7.78□□□□□ -1.16
PRPF39-204ENST00000553605 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
PRPF39-204ENST00000553605 GIPP09681 153 aaPredicted RBP7.77□□□□□ -1.17
PRPF39-204ENST00000553605 SPAG11AQ6PDA7 123 aa7.77□□□□□ -1.17
PRPF39-204ENST00000553605 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
PRPF39-204ENST00000553605 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
PRPF39-204ENST00000553605 RPL37AP8A6NKH3 93 aa7.76□□□□□ -1.17
PRPF39-204ENST00000553605 UBE2AP49459 152 aa7.76□□□□□ -1.17
PRPF39-204ENST00000553605 FAM104AQ969W3 186 aa7.76□□□□□ -1.17
PRPF39-204ENST00000553605 TGIF2-C20orf24A0A0A6YYL0 155 aa7.75□□□□□ -1.17
PRPF39-204ENST00000553605 RAB4AP20338 218 aa7.75□□□□□ -1.17
PRPF39-204ENST00000553605 LINC00167Q96N53 147 aa7.75□□□□□ -1.17
PRPF39-204ENST00000553605 MED9Q9NWA0 146 aa7.75□□□□□ -1.17
PRPF39-204ENST00000553605 IFITM10A6NMD0 228 aa7.74□□□□□ -1.17
PRPF39-204ENST00000553605 TMEM191AQ9H0A3 160 aa7.74□□□□□ -1.17
PRPF39-204ENST00000553605 NDUFA13Q9P0J0 144 aa7.74□□□□□ -1.17
PRPF39-204ENST00000553605 SMKR1H3BMG3 65 aa7.73□□□□□ -1.17
PRPF39-204ENST00000553605 ARPC5O15511 151 aa7.73□□□□□ -1.17
PRPF39-204ENST00000553605 PDE6DO43924 150 aa7.73□□□□□ -1.17
PRPF39-204ENST00000553605 SUMO2P61956 95 aaKnown RBP7.73□□□□□ -1.17
PRPF39-204ENST00000553605 RPL39P62891 51 aaKnown RBP7.73□□□□□ -1.17
PRPF39-204ENST00000553605 HBBP68871 147 aa7.73□□□□□ -1.17
PRPF39-204ENST00000553605 C3orf22Q8N5N4 141 aa7.73□□□□□ -1.17
PRPF39-204ENST00000553605 A0A1B0GVG6 124 aa7.72□□□□□ -1.17
PRPF39-204ENST00000553605 K7EN84 100 aa7.72□□□□□ -1.17
PRPF39-204ENST00000553605 AMN1Q8IY45 258 aa7.72□□□□□ -1.17
PRPF39-204ENST00000553605 BORCS7Q96B45 105 aa7.72□□□□□ -1.17
PRPF39-204ENST00000553605 PPP1R17O96001 155 aa7.71□□□□□ -1.18
PRPF39-204ENST00000553605 MRPS36P82909 103 aaKnown RBP7.71□□□□□ -1.18
PRPF39-204ENST00000553605 NRACQ8N912 160 aa7.71□□□□□ -1.18
PRPF39-204ENST00000553605 OCC1Q8TAD7 63 aa7.71□□□□□ -1.18
PRPF39-204ENST00000553605 GAGE10A6NGK3 116 aa7.7□□□□□ -1.18
PRPF39-204ENST00000553605 A8MWL6 223 aa7.7□□□□□ -1.18
PRPF39-204ENST00000553605 GATCO43716 136 aaKnown RBP7.7□□□□□ -1.18
PRPF39-204ENST00000553605 CKS1BP61024 79 aa7.7□□□□□ -1.18
PRPF39-204ENST00000553605 RPL32P62910 135 aaKnown RBP7.7□□□□□ -1.18
PRPF39-204ENST00000553605 SPANXA1Q9NS26 97 aa7.7□□□□□ -1.18
PRPF39-204ENST00000553605 PRSS2P07478 247 aa7.69□□□□□ -1.18
PRPF39-204ENST00000553605 DAND5Q8N907 189 aa7.69□□□□□ -1.18
PRPF39-204ENST00000553605 A0A1B0GUT8 65 aa7.68□□□□□ -1.18
PRPF39-204ENST00000553605 PPP1R2P9O14990 202 aa7.68□□□□□ -1.18
PRPF39-204ENST00000553605 PNRC1Q12796 327 aaPredicted RBP7.68□□□□□ -1.18
PRPF39-204ENST00000553605 XP32Q5T750 250 aa7.68□□□□□ -1.18
PRPF39-204ENST00000553605 M0R2T5 61 aa7.67□□□□□ -1.18
PRPF39-204ENST00000553605 TNFRSF6BO95407 300 aa7.67□□□□□ -1.18
PRPF39-204ENST00000553605 C6orf226Q5I0X4 101 aa7.67□□□□□ -1.18
PRPF39-204ENST00000553605 LINC01561Q8N1V8 128 aa7.67□□□□□ -1.18
PRPF39-204ENST00000553605 TOMM7Q9P0U1 55 aa7.67□□□□□ -1.18
PRPF39-204ENST00000553605 TCAPO15273 167 aa7.66□□□□□ -1.18
PRPF39-204ENST00000553605 PRLHP81277 87 aa7.66□□□□□ -1.18
PRPF39-204ENST00000553605 PLEKHB2Q96CS7 222 aa7.66□□□□□ -1.18
PRPF39-204ENST00000553605 TEX46H3BTG2 121 aa7.65□□□□□ -1.18
PRPF39-204ENST00000553605 HIGD1CA8MV81 97 aa7.64□□□□□ -1.19
PRPF39-204ENST00000553605 Q6ZN92 141 aa7.64□□□□□ -1.19
PRPF39-204ENST00000553605 FAM231DQ6ZW35 169 aa7.64□□□□□ -1.19
PRPF39-204ENST00000553605 C20orf78Q9BR46 151 aa7.64□□□□□ -1.19
PRPF39-204ENST00000553605 CT83Q5H943 113 aa7.63□□□□□ -1.19
PRPF39-204ENST00000553605 Q8IZM0 81 aa7.63□□□□□ -1.19
PRPF39-204ENST00000553605 ALKBH7Q9BT30 221 aaPredicted RBP7.63□□□□□ -1.19
PRPF39-204ENST00000553605 NDUFA12Q9UI09 145 aa7.63□□□□□ -1.19
PRPF39-204ENST00000553605 IGLV5-37A0A075B6J1 123 aa7.62□□□□□ -1.19
PRPF39-204ENST00000553605 IGKV2-28A0A075B6P5 120 aa7.62□□□□□ -1.19
PRPF39-204ENST00000553605 SPINK1P00995 79 aa7.62□□□□□ -1.19
PRPF39-204ENST00000553605 IGKV2D-28P01615 120 aa7.62□□□□□ -1.19
PRPF39-204ENST00000553605 ZNF345Q14585 488 aa7.62□□□□□ -1.19
PRPF39-204ENST00000553605 FAM19A1Q7Z5A9 133 aa7.62□□□□□ -1.19
PRPF39-204ENST00000553605 F8VRH5 84 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms