RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SH2D1AO60880 128 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 MT-ND6P03923 174 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 ANGP03950 147 aaKnown RBP3.13□□□□□ -1.91
CKAP4-203ENST00000553039 S100A6P06703 90 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 CRYGAP11844 174 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 UBE2D1P51668 147 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 RPS20P60866 119 aaKnown RBP3.13□□□□□ -1.91
CKAP4-203ENST00000553039 UFSP1Q6NVU6 142 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 RASL11AQ6T310 242 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 ZFP2Q6ZN57 461 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 ATP5L2Q7Z4Y8 100 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 IGLV10-54A0A075B6I4 117 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 TRAV21A0A0B4J279 112 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 IGKV2-24A0A0C4DH68 120 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 A0A1B0GW15 77 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 TRGC2P03986 189 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 S100A8P05109 93 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 CFC1BP0CG36 223 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 CRIP1P50238 77 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 RAB4BP61018 213 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 HBBP68871 147 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 NOTCH2NLQ7Z3S9 236 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 ZFP82Q8N141 532 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 NUP35Q8NFH5 326 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 PTH2Q96A98 100 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 GNB1LQ9BYB4 327 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 NAGKQ9UJ70 344 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 TRAPPC1Q9Y5R8 145 aa3.12□□□□□ -1.91
CKAP4-203ENST00000553039 TMSB15BA0A087X1C1 80 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 TRAV8-4A0A0B4J246 113 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 A0A1B0GUT8 65 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 A8MWV9 139 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 F2Z2F3 143 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 IGKV2-30P06310 120 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 CTRLP40313 264 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 ZNF80P51504 273 aaPredicted RBP3.11□□□□□ -1.91
CKAP4-203ENST00000553039 FOXA3P55318 350 aaPredicted RBP3.11□□□□□ -1.91
CKAP4-203ENST00000553039 FABP9Q0Z7S8 132 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 PRR9Q5T870 116 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 MRPL54Q6P161 138 aaKnown RBP3.11□□□□□ -1.91
CKAP4-203ENST00000553039 PGLYRP4Q96LB8 373 aa3.11□□□□□ -1.91
CKAP4-203ENST00000553039 A0A1B0GXF2 115 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 RPL37AP8A6NKH3 93 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST1H2BKO60814 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HSBP1O75506 76 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 APCSP02743 223 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST1H2BJP06899 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 TRGC1P0CF51 173 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 IGLC6P0CF74 106 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 PMCHP20382 165 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST1H2BOP23527 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST1H2BBP33778 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST1H2BDP58876 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST1H2BCP62807 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 RPL32P62910 135 aaKnown RBP3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST2H2BEQ16778 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.1□□□□□ -1.91
CKAP4-203ENST00000553039 TMEM136Q6ZRR5 245 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST1H2BHQ93079 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST1H2BNQ99877 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 HIST1H2BMQ99879 126 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 SAMD10Q9BYL1 202 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
CKAP4-203ENST00000553039 IGKV3D-20A0A0C4DH25 116 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 MUC21A0A0G2JKD1 596 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 LOC105371267A0A1B0GV96 52 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 GRIFINA4D1Z8 144 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 OR5AL1P0C617 328 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 ARMS2P0C7Q2 107 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 LINC00694P0DN24 101 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 S100A4P26447 101 aaKnown RBP3.09□□□□□ -1.91
CKAP4-203ENST00000553039 NDUFA6P56556 154 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 RPL36AP83881 106 aaKnown RBP3.09□□□□□ -1.91
CKAP4-203ENST00000553039 COTL1Q14019 142 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 TMEM97Q5BJF2 176 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 C1orf137Q5JT78 98 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 LYZL1Q6UWQ5 148 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 SMIM15Q7Z3B0 74 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 LINC00269Q8N2A0 174 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 LINC00469Q8N7U9 141 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 GATD1Q8NB37 220 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 CHCHD5Q9BSY4 110 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 MAP1LC3CQ9BXW4 147 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 CNFNQ9BYD5 112 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 JPT2Q9H910 190 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 PRR34Q9NV39 138 aa3.09□□□□□ -1.91
CKAP4-203ENST00000553039 TRBV6-8A0A0A6YYG3 113 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 TRBV10-1A0A0K0K1A3 114 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 H3BVH4 76 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 SNAI2O43623 268 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 S100A2P29034 98 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 TPRXLQ17RH7 258 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 COA6Q5JTJ3 125 aaKnown RBP3.08□□□□□ -1.92
CKAP4-203ENST00000553039 DNLZQ5SXM8 178 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 SPANXN1Q5VSR9 72 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 KRTAP26-1Q6PEX3 210 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 HIST1H4GQ99525 98 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 PHLDA3Q9Y5J5 127 aa3.08□□□□□ -1.92
CKAP4-203ENST00000553039 IGLV7-46A0A075B6I9 117 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 1291.5 ms