RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 UBE2D4Q9Y2X8 147 aa5.67□□□□□ -1.5
CHPT1-208ENST00000552215 TM2D3Q9BRN9 247 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 A0A1B0GV72 72 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 COX7A2LO14548 114 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 PSMB2P49721 201 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 COA6Q5JTJ3 125 aaKnown RBP5.66□□□□□ -1.5
CHPT1-208ENST00000552215 UQCR10Q9UDW1 63 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 IGKV2D-26A0A0A0MRZ7 120 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 TRBV6-5A0A0K0K1A5 114 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 A6NDN8 102 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 GAGE10A6NGK3 116 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 PKIAP61925 76 aa5.66□□□□□ -1.5
CHPT1-208ENST00000552215 DDTP30046 118 aa5.65□□□□□ -1.5
CHPT1-208ENST00000552215 LELP1Q5T871 98 aa5.65□□□□□ -1.5
CHPT1-208ENST00000552215 J3QQQ9 107 aa5.65□□□□□ -1.5
CHPT1-208ENST00000552215 CIRBPQ14011 172 aaKnown RBP5.65□□□□□ -1.5
CHPT1-208ENST00000552215 CAMK2N2Q96S95 79 aa5.65□□□□□ -1.5
CHPT1-208ENST00000552215 LOC107984156A0A0G2JMH3 177 aa5.65□□□□□ -1.51
CHPT1-208ENST00000552215 GAGE2BQ13066 116 aa5.65□□□□□ -1.51
CHPT1-208ENST00000552215 ARL17AQ8IVW1 177 aa5.65□□□□□ -1.51
CHPT1-208ENST00000552215 NHP2Q9NX24 153 aaKnown RBP5.65□□□□□ -1.51
CHPT1-208ENST00000552215 LINC00587B1AMM8 73 aa5.65□□□□□ -1.51
CHPT1-208ENST00000552215 RPL18AQ02543 176 aaKnown RBP5.65□□□□□ -1.51
CHPT1-208ENST00000552215 C9orf116Q5BN46 136 aaPredicted RBP5.65□□□□□ -1.51
CHPT1-208ENST00000552215 MUC7Q8TAX7 377 aa5.64□□□□□ -1.51
CHPT1-208ENST00000552215 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
CHPT1-208ENST00000552215 LINC00588Q9Y4M8 146 aa5.64□□□□□ -1.51
CHPT1-208ENST00000552215 NHLRC4P0CG21 123 aaPredicted RBP5.64□□□□□ -1.51
CHPT1-208ENST00000552215 LGALS9CQ6DKI2 356 aa5.64□□□□□ -1.51
CHPT1-208ENST00000552215 CDC42SE2Q9NRR3 84 aa5.64□□□□□ -1.51
CHPT1-208ENST00000552215 HERVK_113P63121 156 aa5.64□□□□□ -1.51
CHPT1-208ENST00000552215 SPAG11BQ08648 103 aa5.64□□□□□ -1.51
CHPT1-208ENST00000552215 Q6ZVH6 145 aa5.64□□□□□ -1.51
CHPT1-208ENST00000552215 C6orf223Q8N319 242 aa5.64□□□□□ -1.51
CHPT1-208ENST00000552215 LINC00959A0A1B0GUT2 108 aa5.63□□□□□ -1.51
CHPT1-208ENST00000552215 SH2D6Q7Z4S9 175 aa5.63□□□□□ -1.51
CHPT1-208ENST00000552215 IGIPA6NJ69 53 aa5.63□□□□□ -1.51
CHPT1-208ENST00000552215 VAMP3Q15836 100 aa5.63□□□□□ -1.51
CHPT1-208ENST00000552215 TIMM17AQ99595 171 aa5.63□□□□□ -1.51
CHPT1-208ENST00000552215 SEC11AP67812 179 aa5.63□□□□□ -1.51
CHPT1-208ENST00000552215 NUPR2A6NF83 97 aa5.62□□□□□ -1.51
CHPT1-208ENST00000552215 K7EP13 123 aa5.62□□□□□ -1.51
CHPT1-208ENST00000552215 LINC01545Q5VT33 79 aa5.62□□□□□ -1.51
CHPT1-208ENST00000552215 C15orf53Q8NAA6 179 aa5.62□□□□□ -1.51
CHPT1-208ENST00000552215 FBN3Q75N90 2809 aa5.62□□□□□ -1.51
CHPT1-208ENST00000552215 WIPF1O43516 503 aa5.62□□□□□ -1.51
CHPT1-208ENST00000552215 ZNF22P17026 224 aaPredicted RBP5.62□□□□□ -1.51
CHPT1-208ENST00000552215 MAPKAPK5-AS1Q8N8E1 139 aa5.62□□□□□ -1.51
CHPT1-208ENST00000552215 SMIM13P0DJ93 91 aa5.62□□□□□ -1.51
CHPT1-208ENST00000552215 LINC00242Q5T6M2 205 aa5.62□□□□□ -1.51
CHPT1-208ENST00000552215 K7ERJ3 54 aa5.61□□□□□ -1.51
CHPT1-208ENST00000552215 UFSP1Q6NVU6 142 aa5.61□□□□□ -1.51
CHPT1-208ENST00000552215 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
CHPT1-208ENST00000552215 MYMXA0A1B0GTQ4 84 aa5.6□□□□□ -1.51
CHPT1-208ENST00000552215 BOD1L2Q8IYS8 172 aa5.6□□□□□ -1.51
CHPT1-208ENST00000552215 COX7B2Q8TF08 81 aa5.6□□□□□ -1.51
CHPT1-208ENST00000552215 IGLC3P0DOY3 106 aa5.6□□□□□ -1.51
CHPT1-208ENST00000552215 M0R143 59 aa5.6□□□□□ -1.51
CHPT1-208ENST00000552215 UNQ6190/PRO20217Q6UXQ8 127 aa5.6□□□□□ -1.51
CHPT1-208ENST00000552215 WWC2-AS2Q96NR7 200 aa5.6□□□□□ -1.51
CHPT1-208ENST00000552215 HAMPP81172 84 aa5.59□□□□□ -1.51
CHPT1-208ENST00000552215 PIK3CD-AS1Q5SR53 167 aa5.59□□□□□ -1.51
CHPT1-208ENST00000552215 MTURNQ8N3F0 131 aa5.58□□□□□ -1.52
CHPT1-208ENST00000552215 IGLV4-69A0A075B6H9 119 aa5.58□□□□□ -1.52
CHPT1-208ENST00000552215 LINC01549A6NIU2 74 aa5.58□□□□□ -1.52
CHPT1-208ENST00000552215 UBE2D1P51668 147 aa5.58□□□□□ -1.52
CHPT1-208ENST00000552215 S100A7L2Q5SY68 101 aa5.58□□□□□ -1.52
CHPT1-208ENST00000552215 CASC10Q5T4H9 136 aa5.58□□□□□ -1.52
CHPT1-208ENST00000552215 RMI2Q96E14 147 aa5.58□□□□□ -1.52
CHPT1-208ENST00000552215 MEGF8Q7Z7M0 2845 aa5.57□□□□□ -1.52
CHPT1-208ENST00000552215 DNAH10OSP0CZ25 163 aa5.57□□□□□ -1.52
CHPT1-208ENST00000552215 MIR7-3HGQ8N6C7 128 aa5.57□□□□□ -1.52
CHPT1-208ENST00000552215 TSPEAR-AS2P59090 65 aa5.57□□□□□ -1.52
CHPT1-208ENST00000552215 NFE4Q86UQ8 179 aa5.57□□□□□ -1.52
CHPT1-208ENST00000552215 PRR3P79522 188 aaKnown RBP5.57□□□□□ -1.52
CHPT1-208ENST00000552215 IGHV1-58A0A0C4DH39 117 aa5.56□□□□□ -1.52
CHPT1-208ENST00000552215 USP17L23D6RBM5 183 aa5.56□□□□□ -1.52
CHPT1-208ENST00000552215 H3BUT2 72 aa5.56□□□□□ -1.52
CHPT1-208ENST00000552215 NCR3O14931 201 aa5.56□□□□□ -1.52
CHPT1-208ENST00000552215 COX8AP10176 69 aa5.56□□□□□ -1.52
CHPT1-208ENST00000552215 DNHD1Q96M86 4753 aa5.56□□□□□ -1.52
CHPT1-208ENST00000552215 TRAV12-1A0A0B4J245 112 aa5.56□□□□□ -1.52
CHPT1-208ENST00000552215 EREGO14944 169 aa5.56□□□□□ -1.52
CHPT1-208ENST00000552215 TINCRA0A1B0GVN0 87 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 MIAQ16674 131 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 CD164L2Q6UWJ8 174 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 ENHOQ6UWT2 76 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 C10orf126Q8N4M7 172 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 MUSTN1Q8IVN3 82 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 TMEM238C9JI98 176 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 LEPROTO15243 131 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 TM2D2Q9BX73 214 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 PYGO1Q9Y3Y4 419 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 NDUFA1O15239 70 aa5.55□□□□□ -1.52
CHPT1-208ENST00000552215 TMEM223A0PJW6 202 aa5.54□□□□□ -1.52
CHPT1-208ENST00000552215 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
CHPT1-208ENST00000552215 PTH2Q96A98 100 aa5.54□□□□□ -1.52
CHPT1-208ENST00000552215 E9PLD3 99 aa5.54□□□□□ -1.52
CHPT1-208ENST00000552215 LINC00612Q8N6U2 182 aa5.54□□□□□ -1.52
CHPT1-208ENST00000552215 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms