RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 FAT3Q8TDW7 4589 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 DNAH6Q9C0G6 4158 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 MBD5Q9P267 1494 aa-0.8□□□□□ -2.54
SCAF11-215ENST00000551391 FOCADQ5VW36 1801 aa-0.81□□□□□ -2.54
SCAF11-215ENST00000551391 FLNBO75369 2602 aaKnown RBP-0.81□□□□□ -2.54
SCAF11-215ENST00000551391 GAPVD1Q14C86 1478 aa-0.81□□□□□ -2.54
SCAF11-215ENST00000551391 NAIPQ13075 1403 aa-0.81□□□□□ -2.54
SCAF11-215ENST00000551391 CHD8Q9HCK8 2581 aa-0.82□□□□□ -2.54
SCAF11-215ENST00000551391 MUC17Q685J3 4493 aa-0.82□□□□□ -2.54
SCAF11-215ENST00000551391 MIF4GDA9UHW6 222 aaKnown RBP-0.82□□□□□ -2.54
SCAF11-215ENST00000551391 GNG7O60262 68 aa-0.82□□□□□ -2.54
SCAF11-215ENST00000551391 TSLPQ969D9 159 aa-0.82□□□□□ -2.54
SCAF11-215ENST00000551391 ARHGEF12Q9NZN5 1544 aa-0.83□□□□□ -2.54
SCAF11-215ENST00000551391 NDUFA2O43678 99 aa-0.83□□□□□ -2.54
SCAF11-215ENST00000551391 SSSCA1O60232 199 aa-0.83□□□□□ -2.54
SCAF11-215ENST00000551391 SFT2D2O95562 160 aa-0.83□□□□□ -2.54
SCAF11-215ENST00000551391 C8orf59Q8N0T1 100 aaPredicted RBP-0.83□□□□□ -2.54
SCAF11-215ENST00000551391 SPRR2FQ96RM1 72 aa-0.83□□□□□ -2.54
SCAF11-215ENST00000551391 NSD3Q9BZ95 1437 aa-0.83□□□□□ -2.54
SCAF11-215ENST00000551391 RYR1P21817 5038 aa-0.83□□□□□ -2.54
SCAF11-215ENST00000551391 HYDINQ4G0P3 5121 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 TULP4Q9NRJ4 1543 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 KDM5AP29375 1690 aaKnown RBP-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 BIRC6Q9NR09 4857 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 APOC2P02655 101 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 FGF7P21781 194 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 DEFB135Q30KP9 77 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 CCDC58Q4VC31 144 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 COMMD6Q7Z4G1 85 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 C5orf38Q86SI9 138 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 DEFB105AQ8NG35 78 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 FXYD6Q9H0Q3 95 aa-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 SMG6Q86US8 1419 aaKnown RBP-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 GOLGA4Q13439 2230 aaKnown RBP-0.84□□□□□ -2.54
SCAF11-215ENST00000551391 STAB2Q8WWQ8 2551 aa-0.85□□□□□ -2.54
SCAF11-215ENST00000551391 SETD2Q9BYW2 2564 aaPredicted RBP-0.85□□□□□ -2.54
SCAF11-215ENST00000551391 MGPP08493 103 aa-0.85□□□□□ -2.55
SCAF11-215ENST00000551391 ARHGEF5Q12774 1597 aa-0.85□□□□□ -2.55
SCAF11-215ENST00000551391 CATR1Q13166 79 aa-0.85□□□□□ -2.55
SCAF11-215ENST00000551391 MRPL54Q6P161 138 aaKnown RBP-0.85□□□□□ -2.55
SCAF11-215ENST00000551391 PSME4Q14997 1843 aa-0.85□□□□□ -2.55
SCAF11-215ENST00000551391 QRICH2Q9H0J4 1663 aa-0.85□□□□□ -2.55
SCAF11-215ENST00000551391 MYH7P12883 1935 aa-0.85□□□□□ -2.55
SCAF11-215ENST00000551391 POLA1P09884 1462 aaPredicted RBP-0.86□□□□□ -2.55
SCAF11-215ENST00000551391 HIVEP1P15822 2718 aa-0.86□□□□□ -2.55
SCAF11-215ENST00000551391 TMEM263Q8WUH6 116 aaKnown RBP-0.86□□□□□ -2.55
SCAF11-215ENST00000551391 SPRR4Q96PI1 79 aa-0.86□□□□□ -2.55
SCAF11-215ENST00000551391 RYR3Q15413 4870 aa-0.87□□□□□ -2.55
SCAF11-215ENST00000551391 TGP01266 2768 aa-0.87□□□□□ -2.55
SCAF11-215ENST00000551391 PKD1P98161 4303 aa-0.87□□□□□ -2.55
SCAF11-215ENST00000551391 IFNGP01579 166 aa-0.87□□□□□ -2.55
SCAF11-215ENST00000551391 MT1AP04731 61 aa-0.87□□□□□ -2.55
SCAF11-215ENST00000551391 MXRA5Q9NR99 2828 aa-0.87□□□□□ -2.55
SCAF11-215ENST00000551391 ZFHX3Q15911 3703 aa-0.87□□□□□ -2.55
SCAF11-215ENST00000551391 K7EP13 123 aa-0.88□□□□□ -2.55
SCAF11-215ENST00000551391 S100A12P80511 92 aa-0.88□□□□□ -2.55
SCAF11-215ENST00000551391 DEFB112Q30KQ8 113 aa-0.88□□□□□ -2.55
SCAF11-215ENST00000551391 MYOZ3Q8TDC0 251 aa-0.88□□□□□ -2.55
SCAF11-215ENST00000551391 VPS13DQ5THJ4 4388 aa-0.88□□□□□ -2.55
SCAF11-215ENST00000551391 LAMA2P24043 3122 aaKnown RBP-0.88□□□□□ -2.55
SCAF11-215ENST00000551391 A2ML1A8K2U0 1454 aa-0.88□□□□□ -2.55
SCAF11-215ENST00000551391 MAGI1Q96QZ7 1491 aaPredicted RBP-0.88□□□□□ -2.55
SCAF11-215ENST00000551391 URB1O60287 2271 aaKnown RBP-0.89□□□□□ -2.55
SCAF11-215ENST00000551391 TRBV7-4A0A0J9YYF1 115 aa-0.89□□□□□ -2.55
SCAF11-215ENST00000551391 LOC100130705A0A1B0GUX0 176 aa-0.89□□□□□ -2.55
SCAF11-215ENST00000551391 C1orf54Q8WWF1 131 aa-0.89□□□□□ -2.55
SCAF11-215ENST00000551391 NXT2Q9NPJ8 142 aaKnown RBP-0.89□□□□□ -2.55
SCAF11-215ENST00000551391 CDC42SE2Q9NRR3 84 aa-0.89□□□□□ -2.55
SCAF11-215ENST00000551391 LINC00474Q9P2X8 69 aa-0.89□□□□□ -2.55
SCAF11-215ENST00000551391 ROBO1Q9Y6N7 1651 aa-0.89□□□□□ -2.55
SCAF11-215ENST00000551391 BTAF1O14981 1849 aa-0.89□□□□□ -2.55
SCAF11-215ENST00000551391 COX8AP10176 69 aa-0.9□□□□□ -2.55
SCAF11-215ENST00000551391 WHAMMP3Q1A5X7 153 aa-0.9□□□□□ -2.55
SCAF11-215ENST00000551391 C10orf113Q5VZT2 155 aa-0.9□□□□□ -2.55
SCAF11-215ENST00000551391 FAIMQ9NVQ4 179 aa-0.9□□□□□ -2.55
SCAF11-215ENST00000551391 KTN1Q86UP2 1357 aaKnown RBP-0.91□□□□□ -2.55
SCAF11-215ENST00000551391 CHKB-CPT1BH3BT56 60 aa-0.91□□□□□ -2.56
SCAF11-215ENST00000551391 IGLC1P0CG04 106 aa-0.91□□□□□ -2.56
SCAF11-215ENST00000551391 C9orf62Q8N4C0 152 aa-0.91□□□□□ -2.56
SCAF11-215ENST00000551391 TSC22D3Q99576 134 aa-0.91□□□□□ -2.56
SCAF11-215ENST00000551391 UQCR10Q9UDW1 63 aa-0.91□□□□□ -2.56
SCAF11-215ENST00000551391 KIAA0556O60303 1618 aa-0.91□□□□□ -2.56
SCAF11-215ENST00000551391 HMGXB3Q12766 1538 aa-0.91□□□□□ -2.56
SCAF11-215ENST00000551391 TET3O43151 1660 aa-0.91□□□□□ -2.56
SCAF11-215ENST00000551391 HTTP42858 3142 aa-0.91□□□□□ -2.56
SCAF11-215ENST00000551391 KIAA1109Q2LD37 5005 aa-0.92□□□□□ -2.56
SCAF11-215ENST00000551391 LINC00959A0A1B0GUT2 108 aa-0.92□□□□□ -2.56
SCAF11-215ENST00000551391 OOSP1A8MZH6 123 aa-0.92□□□□□ -2.56
SCAF11-215ENST00000551391 SYS1-DBNDD2H3BUS1 97 aa-0.92□□□□□ -2.56
SCAF11-215ENST00000551391 USMG5Q96IX5 58 aa-0.92□□□□□ -2.56
SCAF11-215ENST00000551391 PKHD1L1Q86WI1 4243 aa-0.92□□□□□ -2.56
SCAF11-215ENST00000551391 PCNX1Q96RV3 2341 aa-0.92□□□□□ -2.56
SCAF11-215ENST00000551391 EHBP1L1Q8N3D4 1523 aa-0.93□□□□□ -2.56
SCAF11-215ENST00000551391 APLNQ9ULZ1 77 aa-0.93□□□□□ -2.56
SCAF11-215ENST00000551391 NBPF19A0A087WUL8 3843 aa-0.93□□□□□ -2.56
SCAF11-215ENST00000551391 DNAJC13O75165 2243 aa-0.93□□□□□ -2.56
SCAF11-215ENST00000551391 SETBP1Q9Y6X0 1596 aa-0.94□□□□□ -2.56
SCAF11-215ENST00000551391 CNOT1A5YKK6 2376 aaKnown RBP-0.94□□□□□ -2.56
SCAF11-215ENST00000551391 UBE2L5PA0A1B0GUS4 154 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms