RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PRELID3AQ96N28 172 aa8.13□□□□□ -1.11
NPAS3-209ENST00000551008 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
NPAS3-209ENST00000551008 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
NPAS3-209ENST00000551008 PTTG1IPP53801 180 aa8.12□□□□□ -1.11
NPAS3-209ENST00000551008 PRR3P79522 188 aaKnown RBP8.12□□□□□ -1.11
NPAS3-209ENST00000551008 TMEM18Q96B42 140 aa8.12□□□□□ -1.11
NPAS3-209ENST00000551008 IGLV4-3A0A075B6K6 122 aa8.11□□□□□ -1.11
NPAS3-209ENST00000551008 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.11□□□□□ -1.11
NPAS3-209ENST00000551008 MALP21145 153 aa8.11□□□□□ -1.11
NPAS3-209ENST00000551008 SMAGPQ0VAQ4 97 aa8.11□□□□□ -1.11
NPAS3-209ENST00000551008 ANAPC16Q96DE5 110 aa8.11□□□□□ -1.11
NPAS3-209ENST00000551008 C2orf48Q96LS8 159 aa8.11□□□□□ -1.11
NPAS3-209ENST00000551008 A0A0J9YXV3 536 aa8.1□□□□□ -1.11
NPAS3-209ENST00000551008 A0A1W2PNN7 141 aa8.1□□□□□ -1.11
NPAS3-209ENST00000551008 MT-ND4LP03901 98 aa8.1□□□□□ -1.11
NPAS3-209ENST00000551008 SPAG11BQ08648 103 aa8.1□□□□□ -1.11
NPAS3-209ENST00000551008 LINC00173Q6ZV60 143 aa8.1□□□□□ -1.11
NPAS3-209ENST00000551008 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
NPAS3-209ENST00000551008 IFITM10A6NMD0 228 aa8.09□□□□□ -1.11
NPAS3-209ENST00000551008 RAB14P61106 215 aa8.09□□□□□ -1.11
NPAS3-209ENST00000551008 C10orf25Q5T742 122 aa8.09□□□□□ -1.11
NPAS3-209ENST00000551008 ZC2HC1BQ5TFG8 222 aa8.09□□□□□ -1.11
NPAS3-209ENST00000551008 C7orf33Q8WU49 177 aa8.09□□□□□ -1.11
NPAS3-209ENST00000551008 CAMK2N2Q96S95 79 aa8.09□□□□□ -1.11
NPAS3-209ENST00000551008 PYGO1Q9Y3Y4 419 aa8.09□□□□□ -1.11
NPAS3-209ENST00000551008 LOC389332A0A1B0GUA5 103 aa8.08□□□□□ -1.12
NPAS3-209ENST00000551008 APOMO95445 188 aa8.08□□□□□ -1.12
NPAS3-209ENST00000551008 GAGE2BQ13066 116 aa8.08□□□□□ -1.12
NPAS3-209ENST00000551008 KIAA0087Q14695 138 aa8.08□□□□□ -1.12
NPAS3-209ENST00000551008 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
NPAS3-209ENST00000551008 ORAOV1Q8WV07 137 aa8.08□□□□□ -1.12
NPAS3-209ENST00000551008 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
NPAS3-209ENST00000551008 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
NPAS3-209ENST00000551008 Q8N8P6 123 aa8.07□□□□□ -1.12
NPAS3-209ENST00000551008 OR10D4PQ8NGN7 298 aa8.07□□□□□ -1.12
NPAS3-209ENST00000551008 MAP1LC3AQ9H492 121 aa8.07□□□□□ -1.12
NPAS3-209ENST00000551008 TMEM218A2RU14 115 aa8.06□□□□□ -1.12
NPAS3-209ENST00000551008 UBE2D1P51668 147 aa8.06□□□□□ -1.12
NPAS3-209ENST00000551008 PKIGQ9Y2B9 76 aa8.06□□□□□ -1.12
NPAS3-209ENST00000551008 A0A087WZ39 114 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 RAB5AP20339 215 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 IFI27P40305 119 aaPredicted RBP8.05□□□□□ -1.12
NPAS3-209ENST00000551008 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
NPAS3-209ENST00000551008 RNF151Q2KHN1 245 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 SERTAD4-AS1Q5TG53 156 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 C2orf66Q6UXQ4 117 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 UNQ6190/PRO20217Q6UXQ8 127 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 KRTAP7-1Q8IUC3 87 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 TMEM141Q96I45 108 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 AMELXQ99217 191 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 MRPL35Q9NZE8 188 aaKnown RBP8.05□□□□□ -1.12
NPAS3-209ENST00000551008 C6orf48Q9UBA6 75 aa8.05□□□□□ -1.12
NPAS3-209ENST00000551008 IGIPA6NJ69 53 aa8.04□□□□□ -1.12
NPAS3-209ENST00000551008 ODF1Q14990 250 aa8.04□□□□□ -1.12
NPAS3-209ENST00000551008 KIAA1644Q3SXP7 199 aa8.04□□□□□ -1.12
NPAS3-209ENST00000551008 C9orf116Q5BN46 136 aaPredicted RBP8.04□□□□□ -1.12
NPAS3-209ENST00000551008 UQCC3Q6UW78 93 aa8.04□□□□□ -1.12
NPAS3-209ENST00000551008 IMMP2LQ96T52 175 aa8.04□□□□□ -1.12
NPAS3-209ENST00000551008 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
NPAS3-209ENST00000551008 Q6ZRP5 223 aa8.03□□□□□ -1.12
NPAS3-209ENST00000551008 KRTAP11-1Q8IUC1 163 aa8.03□□□□□ -1.12
NPAS3-209ENST00000551008 CYSLTR1Q9Y271 337 aa8.03□□□□□ -1.12
NPAS3-209ENST00000551008 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
NPAS3-209ENST00000551008 FAM168BA1KXE4 195 aa8.02□□□□□ -1.13
NPAS3-209ENST00000551008 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
NPAS3-209ENST00000551008 TLX1NBP0CAT3 122 aa8.02□□□□□ -1.13
NPAS3-209ENST00000551008 PHF5AQ7RTV0 110 aaKnown RBP8.02□□□□□ -1.13
NPAS3-209ENST00000551008 LINC01600Q96MT4 127 aa8.02□□□□□ -1.13
NPAS3-209ENST00000551008 F8WDY8 70 aa8.01□□□□□ -1.13
NPAS3-209ENST00000551008 NDUFA1O15239 70 aa8.01□□□□□ -1.13
NPAS3-209ENST00000551008 C2orf82Q6UX34 121 aa8.01□□□□□ -1.13
NPAS3-209ENST00000551008 TEX43Q6ZNM6 134 aa8.01□□□□□ -1.13
NPAS3-209ENST00000551008 FAM19A3Q7Z5A8 133 aa8.01□□□□□ -1.13
NPAS3-209ENST00000551008 SEC11CQ9BY50 192 aa8.01□□□□□ -1.13
NPAS3-209ENST00000551008 CTDSP1Q9GZU7 261 aa8.01□□□□□ -1.13
NPAS3-209ENST00000551008 TRAV9-1A0A075B6T8 112 aa8□□□□□ -1.13
NPAS3-209ENST00000551008 K7EMI3 77 aa8□□□□□ -1.13
NPAS3-209ENST00000551008 ORMDL2Q53FV1 153 aa8□□□□□ -1.13
NPAS3-209ENST00000551008 C10orf91Q5T1B1 145 aa8□□□□□ -1.13
NPAS3-209ENST00000551008 NXT2Q9NPJ8 142 aaKnown RBP8□□□□□ -1.13
NPAS3-209ENST00000551008 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
NPAS3-209ENST00000551008 NPSP0C0P6 89 aa7.99□□□□□ -1.13
NPAS3-209ENST00000551008 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
NPAS3-209ENST00000551008 COMMD7Q86VX2 200 aa7.99□□□□□ -1.13
NPAS3-209ENST00000551008 LINC01561Q8N1V8 128 aa7.99□□□□□ -1.13
NPAS3-209ENST00000551008 PLA2G2DQ9UNK4 145 aa7.99□□□□□ -1.13
NPAS3-209ENST00000551008 LINC01546A6NGU7 62 aa7.98□□□□□ -1.13
NPAS3-209ENST00000551008 KRTAP10-8P60410 259 aa7.98□□□□□ -1.13
NPAS3-209ENST00000551008 TOMM6Q96B49 74 aa7.98□□□□□ -1.13
NPAS3-209ENST00000551008 C9orf129Q5T035 196 aaKnown RBP7.97□□□□□ -1.13
NPAS3-209ENST00000551008 TIMM17AQ99595 171 aa7.97□□□□□ -1.13
NPAS3-209ENST00000551008 C2orf88Q9BSF0 95 aa7.97□□□□□ -1.13
NPAS3-209ENST00000551008 ALKBH7Q9BT30 221 aaPredicted RBP7.97□□□□□ -1.13
NPAS3-209ENST00000551008 VCX2Q9H322 139 aa7.97□□□□□ -1.13
NPAS3-209ENST00000551008 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
NPAS3-209ENST00000551008 GAGE2EQ4V326 116 aa7.96□□□□□ -1.14
NPAS3-209ENST00000551008 Q6ZN92 141 aa7.96□□□□□ -1.14
NPAS3-209ENST00000551008 GNB1LQ9BYB4 327 aa7.96□□□□□ -1.14
NPAS3-209ENST00000551008 GAGE2DQ9UEU5 116 aa7.96□□□□□ -1.14
NPAS3-209ENST00000551008 CDKN2A-AS1Q9UH64 79 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms