RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ORAOV1Q8WV07 137 aa13.2□□□□□ -0.3
SMARCC2-210ENST00000550519 IMMP2LQ96T52 175 aa13.2□□□□□ -0.3
SMARCC2-210ENST00000550519 IGLV7-43P04211 117 aa13.19□□□□□ -0.3
SMARCC2-210ENST00000550519 CKS2P33552 79 aa13.19□□□□□ -0.3
SMARCC2-210ENST00000550519 TNFRSF6BO95407 300 aa13.18□□□□□ -0.3
SMARCC2-210ENST00000550519 TLX1NBP0CAT3 122 aa13.18□□□□□ -0.3
SMARCC2-210ENST00000550519 MRPS36P82909 103 aaKnown RBP13.18□□□□□ -0.3
SMARCC2-210ENST00000550519 C10orf25Q5T742 122 aa13.18□□□□□ -0.3
SMARCC2-210ENST00000550519 DIRC1Q969H9 104 aa13.18□□□□□ -0.3
SMARCC2-210ENST00000550519 SMIM2Q9BVW6 85 aa13.18□□□□□ -0.3
SMARCC2-210ENST00000550519 SPANXA1Q9NS26 97 aa13.18□□□□□ -0.3
SMARCC2-210ENST00000550519 A0A1B0GW15 77 aa13.17□□□□□ -0.3
SMARCC2-210ENST00000550519 NDUFA1O15239 70 aa13.17□□□□□ -0.3
SMARCC2-210ENST00000550519 KRTAP11-1Q8IUC1 163 aa13.17□□□□□ -0.3
SMARCC2-210ENST00000550519 FAM168BA1KXE4 195 aa13.16□□□□□ -0.3
SMARCC2-210ENST00000550519 ADIRFQ15847 76 aa13.16□□□□□ -0.3
SMARCC2-210ENST00000550519 UNQ6190/PRO20217Q6UXQ8 127 aa13.16□□□□□ -0.3
SMARCC2-210ENST00000550519 PRR26Q8N8Z3 221 aa13.16□□□□□ -0.3
SMARCC2-210ENST00000550519 A0A087WZ39 114 aa13.15□□□□□ -0.3
SMARCC2-210ENST00000550519 C6orf48Q9UBA6 75 aa13.15□□□□□ -0.3
SMARCC2-210ENST00000550519 LPAP08519 4548 aa13.14□□□□□ -0.31
SMARCC2-210ENST00000550519 IFITM10A6NMD0 228 aa13.14□□□□□ -0.31
SMARCC2-210ENST00000550519 C9JQL5 133 aa13.14□□□□□ -0.31
SMARCC2-210ENST00000550519 HBBP68871 147 aa13.14□□□□□ -0.31
SMARCC2-210ENST00000550519 NAT8Q9UHE5 227 aa13.14□□□□□ -0.31
SMARCC2-210ENST00000550519 hCG_2014768A0A024R1R8 64 aa13.13□□□□□ -0.31
SMARCC2-210ENST00000550519 D6R8Y8 96 aa13.13□□□□□ -0.31
SMARCC2-210ENST00000550519 H0Y9J4 135 aa13.13□□□□□ -0.31
SMARCC2-210ENST00000550519 NPYP01303 97 aa13.13□□□□□ -0.31
SMARCC2-210ENST00000550519 KRTAP7-1Q8IUC3 87 aa13.12□□□□□ -0.31
SMARCC2-210ENST00000550519 SMDT1Q9H4I9 107 aa13.12□□□□□ -0.31
SMARCC2-210ENST00000550519 KIAA0087Q14695 138 aa13.11□□□□□ -0.31
SMARCC2-210ENST00000550519 FAM19A5Q7Z5A7 132 aaPredicted RBP13.11□□□□□ -0.31
SMARCC2-210ENST00000550519 A0A1B0GXF2 115 aa13.1□□□□□ -0.31
SMARCC2-210ENST00000550519 F8W036 122 aa13.1□□□□□ -0.31
SMARCC2-210ENST00000550519 GAGE2EQ4V326 116 aa13.1□□□□□ -0.31
SMARCC2-210ENST00000550519 MRPL54Q6P161 138 aaKnown RBP13.1□□□□□ -0.31
SMARCC2-210ENST00000550519 GAGE2DQ9UEU5 116 aa13.1□□□□□ -0.31
SMARCC2-210ENST00000550519 TGIF2-C20orf24A0A0A6YYL0 155 aa13.09□□□□□ -0.31
SMARCC2-210ENST00000550519 PPBPP02775 128 aa13.09□□□□□ -0.31
SMARCC2-210ENST00000550519 S100A8P05109 93 aa13.09□□□□□ -0.31
SMARCC2-210ENST00000550519 KRTAP1-4P0C5Y4 121 aa13.08□□□□□ -0.32
SMARCC2-210ENST00000550519 PYGO1Q9Y3Y4 419 aa13.08□□□□□ -0.32
SMARCC2-210ENST00000550519 IGLV1-50A0A075B6I6 118 aa13.07□□□□□ -0.32
SMARCC2-210ENST00000550519 IFI27P40305 119 aaPredicted RBP13.07□□□□□ -0.32
SMARCC2-210ENST00000550519 SRSF3P84103 164 aaKnown RBP13.07□□□□□ -0.32
SMARCC2-210ENST00000550519 LINC00242Q5T6M2 205 aa13.07□□□□□ -0.32
SMARCC2-210ENST00000550519 IGLV4-3A0A075B6K6 122 aa13.05□□□□□ -0.32
SMARCC2-210ENST00000550519 TRBV30A0A0K0K1B3 111 aa13.05□□□□□ -0.32
SMARCC2-210ENST00000550519 M0QXV9 152 aa13.05□□□□□ -0.32
SMARCC2-210ENST00000550519 RAB5AP20339 215 aa13.04□□□□□ -0.32
SMARCC2-210ENST00000550519 PEA15Q15121 130 aa13.04□□□□□ -0.32
SMARCC2-210ENST00000550519 C2orf82Q6UX34 121 aa13.04□□□□□ -0.32
SMARCC2-210ENST00000550519 ORMDL3Q8N138 153 aa13.04□□□□□ -0.32
SMARCC2-210ENST00000550519 NDUFC2-KCTD14E9PQ53 114 aa13.03□□□□□ -0.32
SMARCC2-210ENST00000550519 UBE2BP63146 152 aa13.03□□□□□ -0.32
SMARCC2-210ENST00000550519 TMEM136Q6ZRR5 245 aa13.03□□□□□ -0.32
SMARCC2-210ENST00000550519 C9orf129Q5T035 196 aaKnown RBP13.02□□□□□ -0.33
SMARCC2-210ENST00000550519 LINC01561Q8N1V8 128 aa13.02□□□□□ -0.33
SMARCC2-210ENST00000550519 TMEM141Q96I45 108 aa13.02□□□□□ -0.33
SMARCC2-210ENST00000550519 PRELID3AQ96N28 172 aa13.02□□□□□ -0.33
SMARCC2-210ENST00000550519 PRSS47A8MTI9 375 aa13□□□□□ -0.33
SMARCC2-210ENST00000550519 UBE2D1P51668 147 aa13□□□□□ -0.33
SMARCC2-210ENST00000550519 ATP5L2Q7Z4Y8 100 aa13□□□□□ -0.33
SMARCC2-210ENST00000550519 PACRGQ96M98 296 aaPredicted RBP13□□□□□ -0.33
SMARCC2-210ENST00000550519 TEX43Q6ZNM6 134 aa12.99□□□□□ -0.33
SMARCC2-210ENST00000550519 RPL13AP40429 203 aaKnown RBP12.97□□□□□ -0.33
SMARCC2-210ENST00000550519 LINC00173Q6ZV60 143 aa12.96□□□□□ -0.33
SMARCC2-210ENST00000550519 LAMTOR2Q9Y2Q5 125 aa12.96□□□□□ -0.33
SMARCC2-210ENST00000550519 LOC389332A0A1B0GUA5 103 aa12.95□□□□□ -0.34
SMARCC2-210ENST00000550519 ZC2HC1BQ5TFG8 222 aa12.95□□□□□ -0.34
SMARCC2-210ENST00000550519 AMELXQ99217 191 aa12.95□□□□□ -0.34
SMARCC2-210ENST00000550519 C2orf88Q9BSF0 95 aa12.95□□□□□ -0.34
SMARCC2-210ENST00000550519 CARHSP1Q9Y2V2 147 aaKnown RBP12.95□□□□□ -0.34
SMARCC2-210ENST00000550519 MAP1LC3AQ9H492 121 aa12.94□□□□□ -0.34
SMARCC2-210ENST00000550519 CYSLTR1Q9Y271 337 aa12.94□□□□□ -0.34
SMARCC2-210ENST00000550519 ZNF861PO60384 105 aa12.93□□□□□ -0.34
SMARCC2-210ENST00000550519 C2orf66Q6UXQ4 117 aa12.93□□□□□ -0.34
SMARCC2-210ENST00000550519 Q6ZN92 141 aa12.93□□□□□ -0.34
SMARCC2-210ENST00000550519 PRSS2P07478 247 aa12.92□□□□□ -0.34
SMARCC2-210ENST00000550519 MUC2Q02817 5179 aa12.92□□□□□ -0.34
SMARCC2-210ENST00000550519 PRR4Q16378 134 aa12.92□□□□□ -0.34
SMARCC2-210ENST00000550519 FAM19A3Q7Z5A8 133 aa12.92□□□□□ -0.34
SMARCC2-210ENST00000550519 Q8N8P6 123 aa12.92□□□□□ -0.34
SMARCC2-210ENST00000550519 VCX2Q9H322 139 aa12.92□□□□□ -0.34
SMARCC2-210ENST00000550519 C22orf24Q9Y442 160 aa12.92□□□□□ -0.34
SMARCC2-210ENST00000550519 NPSP0C0P6 89 aa12.91□□□□□ -0.34
SMARCC2-210ENST00000550519 Q8IZM0 81 aa12.91□□□□□ -0.34
SMARCC2-210ENST00000550519 TOMM7Q9P0U1 55 aa12.91□□□□□ -0.34
SMARCC2-210ENST00000550519 CKS1BP61024 79 aa12.9□□□□□ -0.34
SMARCC2-210ENST00000550519 C6orf226Q5I0X4 101 aa12.9□□□□□ -0.34
SMARCC2-210ENST00000550519 LINC00469Q8N7U9 141 aa12.9□□□□□ -0.34
SMARCC2-210ENST00000550519 IGIPA6NJ69 53 aa12.89□□□□□ -0.35
SMARCC2-210ENST00000550519 NUPR1O60356 82 aa12.89□□□□□ -0.35
SMARCC2-210ENST00000550519 A0A1B0GVG6 124 aa12.88□□□□□ -0.35
SMARCC2-210ENST00000550519 ORMDL2Q53FV1 153 aa12.88□□□□□ -0.35
SMARCC2-210ENST00000550519 XAGE1AQ9HD64 81 aa12.88□□□□□ -0.35
SMARCC2-210ENST00000550519 K7EMI3 77 aa12.87□□□□□ -0.35
SMARCC2-210ENST00000550519 LBHQ53QV2 105 aaPredicted RBP12.87□□□□□ -0.35
SMARCC2-210ENST00000550519 ALKBH7Q9BT30 221 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms