RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 LAMTOR2Q9Y2Q5 125 aa6.81□□□□□ -1.32
VTI1BP3-201ENST00000550220 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
VTI1BP3-201ENST00000550220 RNASE13Q5GAN3 156 aaKnown RBP6.8□□□□□ -1.32
VTI1BP3-201ENST00000550220 REG3GQ6UW15 175 aa6.8□□□□□ -1.32
VTI1BP3-201ENST00000550220 TMEM136Q6ZRR5 245 aa6.8□□□□□ -1.32
VTI1BP3-201ENST00000550220 Q6ZUT4 128 aa6.8□□□□□ -1.32
VTI1BP3-201ENST00000550220 C5orf38Q86SI9 138 aa6.8□□□□□ -1.32
VTI1BP3-201ENST00000550220 IMMP2LQ96T52 175 aa6.8□□□□□ -1.32
VTI1BP3-201ENST00000550220 IFI27P40305 119 aaPredicted RBP6.79□□□□□ -1.32
VTI1BP3-201ENST00000550220 SPAG11BQ08648 103 aa6.79□□□□□ -1.32
VTI1BP3-201ENST00000550220 PNRC1Q12796 327 aaPredicted RBP6.79□□□□□ -1.32
VTI1BP3-201ENST00000550220 LINC01600Q96MT4 127 aa6.79□□□□□ -1.32
VTI1BP3-201ENST00000550220 PYGO1Q9Y3Y4 419 aa6.79□□□□□ -1.32
VTI1BP3-201ENST00000550220 IGHV3OR16-9A0A0B4J2B5 98 aa6.78□□□□□ -1.32
VTI1BP3-201ENST00000550220 PRSS47A8MTI9 375 aa6.78□□□□□ -1.32
VTI1BP3-201ENST00000550220 NPYP01303 97 aa6.78□□□□□ -1.32
VTI1BP3-201ENST00000550220 MT-ND4LP03901 98 aa6.78□□□□□ -1.32
VTI1BP3-201ENST00000550220 RAB14P61106 215 aa6.78□□□□□ -1.32
VTI1BP3-201ENST00000550220 RPL39P62891 51 aaKnown RBP6.78□□□□□ -1.32
VTI1BP3-201ENST00000550220 ANAPC16Q96DE5 110 aa6.78□□□□□ -1.32
VTI1BP3-201ENST00000550220 PRELID3AQ96N28 172 aa6.78□□□□□ -1.32
VTI1BP3-201ENST00000550220 MRPL35Q9NZE8 188 aaKnown RBP6.78□□□□□ -1.32
VTI1BP3-201ENST00000550220 TGIF2-C20orf24A0A0A6YYL0 155 aa6.77□□□□□ -1.33
VTI1BP3-201ENST00000550220 IFITM10A6NMD0 228 aa6.77□□□□□ -1.33
VTI1BP3-201ENST00000550220 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.77□□□□□ -1.33
VTI1BP3-201ENST00000550220 NDUFA1O15239 70 aa6.77□□□□□ -1.33
VTI1BP3-201ENST00000550220 ORAOV1Q8WV07 137 aa6.77□□□□□ -1.33
VTI1BP3-201ENST00000550220 HMCN2Q8NDA2 5059 aa6.77□□□□□ -1.33
VTI1BP3-201ENST00000550220 K7EMI3 77 aa6.76□□□□□ -1.33
VTI1BP3-201ENST00000550220 G0S2P27469 103 aa6.76□□□□□ -1.33
VTI1BP3-201ENST00000550220 RPL18AQ02543 176 aaKnown RBP6.76□□□□□ -1.33
VTI1BP3-201ENST00000550220 SRSF9Q13242 221 aaKnown RBP eCLIP6.76□□□□□ -1.33
VTI1BP3-201ENST00000550220 A0A087WZ39 114 aa6.75□□□□□ -1.33
VTI1BP3-201ENST00000550220 A0A0J9YXV3 536 aa6.75□□□□□ -1.33
VTI1BP3-201ENST00000550220 NPSP0C0P6 89 aa6.75□□□□□ -1.33
VTI1BP3-201ENST00000550220 TLX1NBP0CAT3 122 aa6.75□□□□□ -1.33
VTI1BP3-201ENST00000550220 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
VTI1BP3-201ENST00000550220 FAM104AQ969W3 186 aa6.75□□□□□ -1.33
VTI1BP3-201ENST00000550220 TMEM141Q96I45 108 aa6.75□□□□□ -1.33
VTI1BP3-201ENST00000550220 MAP1LC3AQ9H492 121 aa6.75□□□□□ -1.33
VTI1BP3-201ENST00000550220 A0A1W2PNN7 141 aa6.74□□□□□ -1.33
VTI1BP3-201ENST00000550220 MT-ND6P03923 174 aa6.74□□□□□ -1.33
VTI1BP3-201ENST00000550220 ORMDL2Q53FV1 153 aa6.74□□□□□ -1.33
VTI1BP3-201ENST00000550220 Q6ZN92 141 aa6.74□□□□□ -1.33
VTI1BP3-201ENST00000550220 TEX43Q6ZNM6 134 aa6.74□□□□□ -1.33
VTI1BP3-201ENST00000550220 LINC01561Q8N1V8 128 aa6.74□□□□□ -1.33
VTI1BP3-201ENST00000550220 OPRPNQ99935 248 aaPredicted RBP6.74□□□□□ -1.33
VTI1BP3-201ENST00000550220 C2orf88Q9BSF0 95 aa6.74□□□□□ -1.33
VTI1BP3-201ENST00000550220 CYSLTR1Q9Y271 337 aa6.74□□□□□ -1.33
VTI1BP3-201ENST00000550220 LINC00242Q5T6M2 205 aa6.73□□□□□ -1.33
VTI1BP3-201ENST00000550220 Q8N8P6 123 aa6.73□□□□□ -1.33
VTI1BP3-201ENST00000550220 IGLV4-3A0A075B6K6 122 aa6.72□□□□□ -1.33
VTI1BP3-201ENST00000550220 TRBV30A0A0K0K1B3 111 aa6.72□□□□□ -1.33
VTI1BP3-201ENST00000550220 LOC389332A0A1B0GUA5 103 aa6.72□□□□□ -1.33
VTI1BP3-201ENST00000550220 PAPPA-AS1Q5QFB9 102 aa6.72□□□□□ -1.33
VTI1BP3-201ENST00000550220 VCX2Q9H322 139 aa6.72□□□□□ -1.33
VTI1BP3-201ENST00000550220 NXT2Q9NPJ8 142 aaKnown RBP6.72□□□□□ -1.33
VTI1BP3-201ENST00000550220 KRTAP10-8P60410 259 aa6.71□□□□□ -1.34
VTI1BP3-201ENST00000550220 SEC11AP67812 179 aa6.71□□□□□ -1.34
VTI1BP3-201ENST00000550220 C2orf66Q6UXQ4 117 aa6.71□□□□□ -1.34
VTI1BP3-201ENST00000550220 UNQ6190/PRO20217Q6UXQ8 127 aa6.71□□□□□ -1.34
VTI1BP3-201ENST00000550220 PACRGQ96M98 296 aaPredicted RBP6.71□□□□□ -1.34
VTI1BP3-201ENST00000550220 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.34
VTI1BP3-201ENST00000550220 PSORS1C2Q9UIG4 136 aa6.71□□□□□ -1.34
VTI1BP3-201ENST00000550220 UBE2D1P51668 147 aa6.7□□□□□ -1.34
VTI1BP3-201ENST00000550220 KIAA0087Q14695 138 aa6.7□□□□□ -1.34
VTI1BP3-201ENST00000550220 C1orf137Q5JT78 98 aa6.7□□□□□ -1.34
VTI1BP3-201ENST00000550220 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
VTI1BP3-201ENST00000550220 TNXBP22105 4242 aa6.7□□□□□ -1.34
VTI1BP3-201ENST00000550220 TRAV9-1A0A075B6T8 112 aa6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 LINC01549A6NIU2 74 aa6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 PRSS2P07478 247 aa6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 GAGE2EQ4V326 116 aa6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 UQCC3Q6UW78 93 aa6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 DIRC1Q969H9 104 aa6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 AMELXQ99217 191 aa6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 GAGE2DQ9UEU5 116 aa6.69□□□□□ -1.34
VTI1BP3-201ENST00000550220 IGIPA6NJ69 53 aa6.68□□□□□ -1.34
VTI1BP3-201ENST00000550220 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
VTI1BP3-201ENST00000550220 CKS1BP61024 79 aa6.68□□□□□ -1.34
VTI1BP3-201ENST00000550220 HERVK_113P63121 156 aa6.68□□□□□ -1.34
VTI1BP3-201ENST00000550220 C6orf226Q5I0X4 101 aa6.68□□□□□ -1.34
VTI1BP3-201ENST00000550220 CLLU1Q5K131 121 aa6.68□□□□□ -1.34
VTI1BP3-201ENST00000550220 FAM19A3Q7Z5A8 133 aa6.68□□□□□ -1.34
VTI1BP3-201ENST00000550220 IGLV7-43P04211 117 aa6.67□□□□□ -1.34
VTI1BP3-201ENST00000550220 Q8IZM0 81 aa6.67□□□□□ -1.34
VTI1BP3-201ENST00000550220 TIMM17AQ99595 171 aa6.67□□□□□ -1.34
VTI1BP3-201ENST00000550220 ODF1Q14990 250 aa6.66□□□□□ -1.34
VTI1BP3-201ENST00000550220 GEMIN7Q9H840 131 aaKnown RBP6.66□□□□□ -1.34
VTI1BP3-201ENST00000550220 FAM168BA1KXE4 195 aa6.65□□□□□ -1.34
VTI1BP3-201ENST00000550220 A6NJY4 79 aa6.65□□□□□ -1.34
VTI1BP3-201ENST00000550220 S100PP25815 95 aa6.65□□□□□ -1.34
VTI1BP3-201ENST00000550220 UBE2BP63146 152 aa6.65□□□□□ -1.34
VTI1BP3-201ENST00000550220 COX19Q49B96 90 aa6.65□□□□□ -1.34
VTI1BP3-201ENST00000550220 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
VTI1BP3-201ENST00000550220 LCE2CQ5TA81 110 aa6.65□□□□□ -1.34
VTI1BP3-201ENST00000550220 C2orf82Q6UX34 121 aa6.65□□□□□ -1.34
VTI1BP3-201ENST00000550220 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms