RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 D6R8Y8 96 aa10.74□□□□□ -0.69
CHMP1A-205ENST00000548650 REG3GQ6UW15 175 aa10.74□□□□□ -0.69
CHMP1A-205ENST00000548650 TCAPO15273 167 aa10.73□□□□□ -0.69
CHMP1A-205ENST00000548650 NPYP01303 97 aa10.73□□□□□ -0.69
CHMP1A-205ENST00000548650 KRTAP10-8P60410 259 aa10.73□□□□□ -0.69
CHMP1A-205ENST00000548650 HBBP68871 147 aa10.73□□□□□ -0.69
CHMP1A-205ENST00000548650 RPL18AQ02543 176 aaKnown RBP10.73□□□□□ -0.69
CHMP1A-205ENST00000548650 MRPL54Q6P161 138 aaKnown RBP10.73□□□□□ -0.69
CHMP1A-205ENST00000548650 OR10D4PQ8NGN7 298 aa10.73□□□□□ -0.69
CHMP1A-205ENST00000548650 SPANXA1Q9NS26 97 aa10.73□□□□□ -0.69
CHMP1A-205ENST00000548650 PNRC1Q12796 327 aaPredicted RBP10.72□□□□□ -0.69
CHMP1A-205ENST00000548650 C9orf116Q5BN46 136 aaPredicted RBP10.72□□□□□ -0.69
CHMP1A-205ENST00000548650 IGHV3OR16-9A0A0B4J2B5 98 aa10.71□□□□□ -0.69
CHMP1A-205ENST00000548650 S100A8P05109 93 aa10.71□□□□□ -0.69
CHMP1A-205ENST00000548650 MRPS36P82909 103 aaKnown RBP10.71□□□□□ -0.69
CHMP1A-205ENST00000548650 OPRPNQ99935 248 aaPredicted RBP10.71□□□□□ -0.69
CHMP1A-205ENST00000548650 F8W036 122 aa10.7□□□□□ -0.7
CHMP1A-205ENST00000548650 RNF151Q2KHN1 245 aa10.7□□□□□ -0.7
CHMP1A-205ENST00000548650 ORAOV1Q8WV07 137 aa10.7□□□□□ -0.7
CHMP1A-205ENST00000548650 MT-ND4LP03901 98 aa10.69□□□□□ -0.7
CHMP1A-205ENST00000548650 MRPL35Q9NZE8 188 aaKnown RBP10.69□□□□□ -0.7
CHMP1A-205ENST00000548650 PSORS1C2Q9UIG4 136 aa10.69□□□□□ -0.7
CHMP1A-205ENST00000548650 IFITM10A6NMD0 228 aa10.68□□□□□ -0.7
CHMP1A-205ENST00000548650 PPBPP02775 128 aa10.68□□□□□ -0.7
CHMP1A-205ENST00000548650 ADCYAP1P18509 176 aa10.68□□□□□ -0.7
CHMP1A-205ENST00000548650 UQCC3Q6UW78 93 aa10.68□□□□□ -0.7
CHMP1A-205ENST00000548650 ANAPC16Q96DE5 110 aa10.68□□□□□ -0.7
CHMP1A-205ENST00000548650 RNF213Q63HN8 5207 aa10.68□□□□□ -0.7
CHMP1A-205ENST00000548650 TMEM218A2RU14 115 aa10.67□□□□□ -0.7
CHMP1A-205ENST00000548650 PHF5AQ7RTV0 110 aaKnown RBP10.67□□□□□ -0.7
CHMP1A-205ENST00000548650 F8WDY8 70 aa10.66□□□□□ -0.7
CHMP1A-205ENST00000548650 NDUFA1O15239 70 aa10.66□□□□□ -0.7
CHMP1A-205ENST00000548650 MT-ND6P03923 174 aa10.66□□□□□ -0.7
CHMP1A-205ENST00000548650 C10orf25Q5T742 122 aa10.66□□□□□ -0.7
CHMP1A-205ENST00000548650 COMMD7Q86VX2 200 aa10.66□□□□□ -0.7
CHMP1A-205ENST00000548650 ORMDL3Q8N138 153 aa10.66□□□□□ -0.7
CHMP1A-205ENST00000548650 ATP5L2Q7Z4Y8 100 aa10.65□□□□□ -0.7
CHMP1A-205ENST00000548650 C6orf48Q9UBA6 75 aa10.65□□□□□ -0.7
CHMP1A-205ENST00000548650 TLX1NBP0CAT3 122 aa10.64□□□□□ -0.71
CHMP1A-205ENST00000548650 IFI27P40305 119 aaPredicted RBP10.64□□□□□ -0.71
CHMP1A-205ENST00000548650 PRELID3AQ96N28 172 aa10.64□□□□□ -0.71
CHMP1A-205ENST00000548650 IMMP2LQ96T52 175 aa10.64□□□□□ -0.71
CHMP1A-205ENST00000548650 IGLV4-3A0A075B6K6 122 aa10.63□□□□□ -0.71
CHMP1A-205ENST00000548650 TGIF2-C20orf24A0A0A6YYL0 155 aa10.63□□□□□ -0.71
CHMP1A-205ENST00000548650 FAM168BA1KXE4 195 aa10.63□□□□□ -0.71
CHMP1A-205ENST00000548650 C1orf137Q5JT78 98 aa10.63□□□□□ -0.71
CHMP1A-205ENST00000548650 UNQ6190/PRO20217Q6UXQ8 127 aa10.63□□□□□ -0.71
CHMP1A-205ENST00000548650 PYGO1Q9Y3Y4 419 aa10.63□□□□□ -0.71
CHMP1A-205ENST00000548650 A0A087WZ39 114 aa10.62□□□□□ -0.71
CHMP1A-205ENST00000548650 KIAA0087Q14695 138 aa10.62□□□□□ -0.71
CHMP1A-205ENST00000548650 LINC00242Q5T6M2 205 aa10.62□□□□□ -0.71
CHMP1A-205ENST00000548650 TMEM136Q6ZRR5 245 aa10.62□□□□□ -0.71
CHMP1A-205ENST00000548650 KRTAP11-1Q8IUC1 163 aa10.62□□□□□ -0.71
CHMP1A-205ENST00000548650 SEC11CQ9BY50 192 aa10.62□□□□□ -0.71
CHMP1A-205ENST00000548650 RAB5AP20339 215 aa10.61□□□□□ -0.71
CHMP1A-205ENST00000548650 PRSS47A8MTI9 375 aa10.6□□□□□ -0.71
CHMP1A-205ENST00000548650 FAM19A5Q7Z5A7 132 aaPredicted RBP10.6□□□□□ -0.71
CHMP1A-205ENST00000548650 TMEM141Q96I45 108 aa10.6□□□□□ -0.71
CHMP1A-205ENST00000548650 IGLV7-43P04211 117 aa10.59□□□□□ -0.71
CHMP1A-205ENST00000548650 KRTAP7-1Q8IUC3 87 aa10.59□□□□□ -0.71
CHMP1A-205ENST00000548650 LAMTOR2Q9Y2Q5 125 aa10.59□□□□□ -0.71
CHMP1A-205ENST00000548650 GAGE2EQ4V326 116 aa10.58□□□□□ -0.72
CHMP1A-205ENST00000548650 CTDSP1Q9GZU7 261 aa10.58□□□□□ -0.72
CHMP1A-205ENST00000548650 MAP1LC3AQ9H492 121 aa10.58□□□□□ -0.72
CHMP1A-205ENST00000548650 GAGE2DQ9UEU5 116 aa10.58□□□□□ -0.72
CHMP1A-205ENST00000548650 UBE2D1P51668 147 aa10.57□□□□□ -0.72
CHMP1A-205ENST00000548650 C2orf82Q6UX34 121 aa10.57□□□□□ -0.72
CHMP1A-205ENST00000548650 TEX43Q6ZNM6 134 aa10.57□□□□□ -0.72
CHMP1A-205ENST00000548650 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
CHMP1A-205ENST00000548650 TRBV30A0A0K0K1B3 111 aa10.56□□□□□ -0.72
CHMP1A-205ENST00000548650 LOC389332A0A1B0GUA5 103 aa10.56□□□□□ -0.72
CHMP1A-205ENST00000548650 DIRC1Q969H9 104 aa10.56□□□□□ -0.72
CHMP1A-205ENST00000548650 CYSLTR1Q9Y271 337 aa10.56□□□□□ -0.72
CHMP1A-205ENST00000548650 M0QXV9 152 aa10.55□□□□□ -0.72
CHMP1A-205ENST00000548650 C10orf91Q5T1B1 145 aa10.55□□□□□ -0.72
CHMP1A-205ENST00000548650 ZC2HC1BQ5TFG8 222 aa10.55□□□□□ -0.72
CHMP1A-205ENST00000548650 C2orf66Q6UXQ4 117 aa10.55□□□□□ -0.72
CHMP1A-205ENST00000548650 LINC01561Q8N1V8 128 aa10.55□□□□□ -0.72
CHMP1A-205ENST00000548650 Q8N8P6 123 aa10.55□□□□□ -0.72
CHMP1A-205ENST00000548650 NDUFC2-KCTD14E9PQ53 114 aa10.54□□□□□ -0.72
CHMP1A-205ENST00000548650 H0Y9J4 135 aa10.54□□□□□ -0.72
CHMP1A-205ENST00000548650 AMELXQ99217 191 aa10.54□□□□□ -0.72
CHMP1A-205ENST00000548650 C2orf88Q9BSF0 95 aa10.54□□□□□ -0.72
CHMP1A-205ENST00000548650 C9orf129Q5T035 196 aaKnown RBP10.53□□□□□ -0.72
CHMP1A-205ENST00000548650 PRR26Q8N8Z3 221 aa10.53□□□□□ -0.72
CHMP1A-205ENST00000548650 CARHSP1Q9Y2V2 147 aaKnown RBP10.53□□□□□ -0.72
CHMP1A-205ENST00000548650 S100PP25815 95 aa10.52□□□□□ -0.73
CHMP1A-205ENST00000548650 Q6ZN92 141 aa10.52□□□□□ -0.73
CHMP1A-205ENST00000548650 PACRGQ96M98 296 aaPredicted RBP10.52□□□□□ -0.73
CHMP1A-205ENST00000548650 IGIPA6NJ69 53 aa10.51□□□□□ -0.73
CHMP1A-205ENST00000548650 NPSP0C0P6 89 aa10.51□□□□□ -0.73
CHMP1A-205ENST00000548650 ORMDL2Q53FV1 153 aa10.51□□□□□ -0.73
CHMP1A-205ENST00000548650 FAM19A3Q7Z5A8 133 aa10.51□□□□□ -0.73
CHMP1A-205ENST00000548650 RPS10P5Q9NQ39 176 aa10.51□□□□□ -0.73
CHMP1A-205ENST00000548650 TRAV9-1A0A075B6T8 112 aa10.5□□□□□ -0.73
CHMP1A-205ENST00000548650 K7EMI3 77 aa10.5□□□□□ -0.73
CHMP1A-205ENST00000548650 KRTAP1-4P0C5Y4 121 aa10.5□□□□□ -0.73
CHMP1A-205ENST00000548650 UBE2BP63146 152 aa10.5□□□□□ -0.73
CHMP1A-205ENST00000548650 RHEBQ15382 184 aa10.5□□□□□ -0.73
CHMP1A-205ENST00000548650 KIAA1644Q3SXP7 199 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms