RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 Q9HAA7 133 aa19.31■□□□□ 0.68
BRF1-213ENST00000548421 DNAH6Q9C0G6 4158 aa19.3■□□□□ 0.68
BRF1-213ENST00000548421 COX6A2Q02221 97 aa19.3■□□□□ 0.68
BRF1-213ENST00000548421 PYY3Q5JQD4 70 aa19.29■□□□□ 0.68
BRF1-213ENST00000548421 C1orf43Q9BWL3 253 aa19.29■□□□□ 0.68
BRF1-213ENST00000548421 KMT2AQ03164 3969 aa19.29■□□□□ 0.68
BRF1-213ENST00000548421 CD164L2Q6UWJ8 174 aa19.28■□□□□ 0.68
BRF1-213ENST00000548421 IGLV5-45A0A087WSX0 123 aa19.27■□□□□ 0.67
BRF1-213ENST00000548421 LINC00469Q8N7U9 141 aa19.27■□□□□ 0.67
BRF1-213ENST00000548421 RMI2Q96E14 147 aa19.27■□□□□ 0.67
BRF1-213ENST00000548421 IGKV2D-24A0A075B6R9 120 aa19.26■□□□□ 0.67
BRF1-213ENST00000548421 ZNF22P17026 224 aaPredicted RBP19.26■□□□□ 0.67
BRF1-213ENST00000548421 ATOH7Q8N100 152 aa19.26■□□□□ 0.67
BRF1-213ENST00000548421 IGHV3OR16-9A0A0B4J2B5 98 aa19.25■□□□□ 0.67
BRF1-213ENST00000548421 TMEM170BQ5T4T1 132 aa19.25■□□□□ 0.67
BRF1-213ENST00000548421 GAGE12HA6NDE8 117 aa19.24■□□□□ 0.67
BRF1-213ENST00000548421 CDKN2A-AS1Q9UH64 79 aa19.24■□□□□ 0.67
BRF1-213ENST00000548421 M0R2N4 97 aa19.23■□□□□ 0.67
BRF1-213ENST00000548421 FOXI1Q12951 378 aa19.22■□□□□ 0.67
BRF1-213ENST00000548421 Q6ZR54 194 aa19.22■□□□□ 0.67
BRF1-213ENST00000548421 KRTAP26-1Q6PEX3 210 aa19.22■□□□□ 0.67
BRF1-213ENST00000548421 H3BRM9 83 aa19.21■□□□□ 0.67
BRF1-213ENST00000548421 COX11Q9Y6N1 276 aa19.2■□□□□ 0.66
BRF1-213ENST00000548421 A0A087WZ39 114 aa19.19■□□□□ 0.66
BRF1-213ENST00000548421 COX7A2LO14548 114 aa19.19■□□□□ 0.66
BRF1-213ENST00000548421 C5orf38Q86SI9 138 aa19.19■□□□□ 0.66
BRF1-213ENST00000548421 TM2D2Q9BX73 214 aa19.18■□□□□ 0.66
BRF1-213ENST00000548421 TMEM223A0PJW6 202 aa19.16■□□□□ 0.66
BRF1-213ENST00000548421 SMIM6P0DI80 62 aa19.16■□□□□ 0.66
BRF1-213ENST00000548421 SACSQ9NZJ4 4579 aa19.16■□□□□ 0.66
BRF1-213ENST00000548421 LCE6AA0A183 80 aa19.16■□□□□ 0.66
BRF1-213ENST00000548421 SPINK8P0C7L1 97 aa19.15■□□□□ 0.66
BRF1-213ENST00000548421 LINC01561Q8N1V8 128 aa19.15■□□□□ 0.66
BRF1-213ENST00000548421 STPG4Q8N801 248 aa19.15■□□□□ 0.66
BRF1-213ENST00000548421 DNAH10Q8IVF4 4471 aa19.14■□□□□ 0.66
BRF1-213ENST00000548421 hDV102S1A0JD36 115 aa19.14■□□□□ 0.65
BRF1-213ENST00000548421 MALP21145 153 aa19.14■□□□□ 0.65
BRF1-213ENST00000548421 HERVK_113P61574 105 aa19.14■□□□□ 0.65
BRF1-213ENST00000548421 CDPF1Q6NVV7 123 aa19.14■□□□□ 0.65
BRF1-213ENST00000548421 HSBP1L1C9JCN9 74 aa19.13■□□□□ 0.65
BRF1-213ENST00000548421 SMIM1B2RUZ4 78 aa19.12■□□□□ 0.65
BRF1-213ENST00000548421 MAJINQ3KP22 176 aa19.12■□□□□ 0.65
BRF1-213ENST00000548421 C6orf223Q8N319 242 aa19.11■□□□□ 0.65
BRF1-213ENST00000548421 VAMP8Q9BV40 100 aa19.1■□□□□ 0.65
BRF1-213ENST00000548421 DNAH2Q9P225 4427 aa19.1■□□□□ 0.65
BRF1-213ENST00000548421 PSCAO43653 123 aa19.09■□□□□ 0.65
BRF1-213ENST00000548421 IGHV3-64A0A075B6Q5 118 aa19.09■□□□□ 0.65
BRF1-213ENST00000548421 IGHV1-58A0A0C4DH39 117 aa19.09■□□□□ 0.65
BRF1-213ENST00000548421 APOMO95445 188 aa19.09■□□□□ 0.65
BRF1-213ENST00000548421 MAPKAPK5-AS1Q8N8E1 139 aa19.09■□□□□ 0.65
BRF1-213ENST00000548421 IGLV5-39A0A0G2JS06 123 aa19.08■□□□□ 0.64
BRF1-213ENST00000548421 E9PLD3 99 aa19.08■□□□□ 0.64
BRF1-213ENST00000548421 Q6ZRN7 208 aaPredicted RBP19.08■□□□□ 0.64
BRF1-213ENST00000548421 ANKRD39Q53RE8 183 aa19.07■□□□□ 0.64
BRF1-213ENST00000548421 HYDINQ4G0P3 5121 aa19.07■□□□□ 0.64
BRF1-213ENST00000548421 KMT2CQ8NEZ4 4911 aaKnown RBP19.06■□□□□ 0.64
BRF1-213ENST00000548421 C1orf134Q5TEV5 83 aa19.06■□□□□ 0.64
BRF1-213ENST00000548421 PAM16Q9Y3D7 125 aa19.05■□□□□ 0.64
BRF1-213ENST00000548421 S100A12P80511 92 aa19.04■□□□□ 0.64
BRF1-213ENST00000548421 ORAOV1Q8WV07 137 aa19.04■□□□□ 0.64
BRF1-213ENST00000548421 LEPROTO15243 131 aa19.03■□□□□ 0.64
BRF1-213ENST00000548421 SPATA45Q537H7 98 aa19.03■□□□□ 0.64
BRF1-213ENST00000548421 CFAP161Q6P656 301 aa19.03■□□□□ 0.64
BRF1-213ENST00000548421 C15orf56Q8N910 161 aa19.02■□□□□ 0.63
BRF1-213ENST00000548421 PLEKHB2Q96CS7 222 aa19.02■□□□□ 0.63
BRF1-213ENST00000548421 IGKV2D-26A0A0A0MRZ7 120 aa19.01■□□□□ 0.63
BRF1-213ENST00000548421 TOMM7Q9P0U1 55 aa19.01■□□□□ 0.63
BRF1-213ENST00000548421 NMUP48645 174 aa19■□□□□ 0.63
BRF1-213ENST00000548421 COX7B2Q8TF08 81 aa19■□□□□ 0.63
BRF1-213ENST00000548421 C12orf57Q99622 126 aa19■□□□□ 0.63
BRF1-213ENST00000548421 USP17L23D6RBM5 183 aa18.99■□□□□ 0.63
BRF1-213ENST00000548421 Q8IZM0 81 aa18.99■□□□□ 0.63
BRF1-213ENST00000548421 J3QQQ9 107 aa18.98■□□□□ 0.63
BRF1-213ENST00000548421 PRSS2P07478 247 aa18.98■□□□□ 0.63
BRF1-213ENST00000548421 SPAG11BQ08648 103 aa18.98■□□□□ 0.63
BRF1-213ENST00000548421 TSPEAR-AS2P59090 65 aa18.97■□□□□ 0.63
BRF1-213ENST00000548421 LGALS3P17931 250 aaKnown RBP18.97■□□□□ 0.63
BRF1-213ENST00000548421 LINC00518Q8N0U6 118 aa18.97■□□□□ 0.63
BRF1-213ENST00000548421 GVQW2A0A096LPI5 108 aaPredicted RBP18.96■□□□□ 0.63
BRF1-213ENST00000548421 LECT2O14960 151 aa18.96■□□□□ 0.63
BRF1-213ENST00000548421 KIAA0087Q14695 138 aa18.96■□□□□ 0.63
BRF1-213ENST00000548421 HIGD2BQ4VC39 106 aa18.96■□□□□ 0.63
BRF1-213ENST00000548421 FRAS1Q86XX4 4008 aa18.95■□□□□ 0.62
BRF1-213ENST00000548421 C6orf226Q5I0X4 101 aa18.95■□□□□ 0.62
BRF1-213ENST00000548421 ZNF561-AS1K7EIQ3 104 aa18.94■□□□□ 0.62
BRF1-213ENST00000548421 WFDC2Q14508 124 aa18.93■□□□□ 0.62
BRF1-213ENST00000548421 LRCOL1A6NCL2 159 aa18.92■□□□□ 0.62
BRF1-213ENST00000548421 DNAH17Q9UFH2 4485 aa18.91■□□□□ 0.62
BRF1-213ENST00000548421 C14orf177Q52M58 125 aa18.9■□□□□ 0.62
BRF1-213ENST00000548421 PCP2Q8IVA1 136 aa18.9■□□□□ 0.62
BRF1-213ENST00000548421 LINC00526Q96FQ7 95 aa18.9■□□□□ 0.62
BRF1-213ENST00000548421 TTTY13Q9BZ97 58 aa18.9■□□□□ 0.62
BRF1-213ENST00000548421 CXCL5P42830 114 aa18.9■□□□□ 0.62
BRF1-213ENST00000548421 CKS1BP61024 79 aa18.9■□□□□ 0.62
BRF1-213ENST00000548421 NTN5Q8WTR8 489 aaPredicted RBP18.9■□□□□ 0.62
BRF1-213ENST00000548421 NDUFA12Q9UI09 145 aa18.9■□□□□ 0.62
BRF1-213ENST00000548421 RTL8CO15255 209 aa18.88■□□□□ 0.61
BRF1-213ENST00000548421 COX8AP10176 69 aa18.88■□□□□ 0.61
BRF1-213ENST00000548421 C2orf48Q96LS8 159 aa18.88■□□□□ 0.61
BRF1-213ENST00000548421 ZNF815PA8K554 130 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms