RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 Q8N8P6 123 aa8.83□□□□□ -1
PTCH1-217ENST00000548420 MAP1LC3AQ9H492 121 aa8.83□□□□□ -1
PTCH1-217ENST00000548420 PYGO1Q9Y3Y4 419 aa8.83□□□□□ -1
PTCH1-217ENST00000548420 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.82□□□□□ -1
PTCH1-217ENST00000548420 RAB5AP20339 215 aa8.82□□□□□ -1
PTCH1-217ENST00000548420 RHEBQ15382 184 aa8.82□□□□□ -1
PTCH1-217ENST00000548420 RNASE13Q5GAN3 156 aaKnown RBP8.82□□□□□ -1
PTCH1-217ENST00000548420 IGHV1-58A0A0C4DH39 117 aa8.81□□□□□ -1
PTCH1-217ENST00000548420 A0A0J9YXV3 536 aa8.81□□□□□ -1
PTCH1-217ENST00000548420 LOC389332A0A1B0GUA5 103 aa8.81□□□□□ -1
PTCH1-217ENST00000548420 PANO1I0J062 215 aa8.81□□□□□ -1
PTCH1-217ENST00000548420 K7EMI3 77 aa8.81□□□□□ -1
PTCH1-217ENST00000548420 HIGD2BQ4VC39 106 aa8.81□□□□□ -1
PTCH1-217ENST00000548420 OPRPNQ99935 248 aaPredicted RBP8.81□□□□□ -1
PTCH1-217ENST00000548420 GNB1LQ9BYB4 327 aa8.81□□□□□ -1
PTCH1-217ENST00000548420 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.81□□□□□ -1
PTCH1-217ENST00000548420 IGHV3-64A0A075B6Q5 118 aa8.8□□□□□ -1
PTCH1-217ENST00000548420 TRAV13-1A0A0B4J241 112 aa8.8□□□□□ -1
PTCH1-217ENST00000548420 S100PP25815 95 aa8.8□□□□□ -1
PTCH1-217ENST00000548420 COX19Q49B96 90 aa8.79□□□□□ -1
PTCH1-217ENST00000548420 NXT2Q9NPJ8 142 aaKnown RBP8.79□□□□□ -1
PTCH1-217ENST00000548420 IGHV3OR16-9A0A0B4J2B5 98 aa8.78□□□□□ -1
PTCH1-217ENST00000548420 COX7A2LO14548 114 aa8.78□□□□□ -1
PTCH1-217ENST00000548420 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
PTCH1-217ENST00000548420 ORMDL2Q53FV1 153 aa8.78□□□□□ -1
PTCH1-217ENST00000548420 RPS10P5Q9NQ39 176 aa8.78□□□□□ -1
PTCH1-217ENST00000548420 IGLV4-3A0A075B6K6 122 aa8.77□□□□□ -1.01
PTCH1-217ENST00000548420 IFI27P40305 119 aaPredicted RBP8.77□□□□□ -1.01
PTCH1-217ENST00000548420 LINC01546A6NGU7 62 aa8.76□□□□□ -1.01
PTCH1-217ENST00000548420 IGIPA6NJ69 53 aa8.76□□□□□ -1.01
PTCH1-217ENST00000548420 KRTAP9-7A8MTY7 169 aa8.76□□□□□ -1.01
PTCH1-217ENST00000548420 NPSP0C0P6 89 aa8.76□□□□□ -1.01
PTCH1-217ENST00000548420 C2orf66Q6UXQ4 117 aa8.76□□□□□ -1.01
PTCH1-217ENST00000548420 LINC00526Q96FQ7 95 aa8.76□□□□□ -1.01
PTCH1-217ENST00000548420 ALKBH7Q9BT30 221 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-217ENST00000548420 CYSLTR1Q9Y271 337 aa8.76□□□□□ -1.01
PTCH1-217ENST00000548420 MT-ND6P03923 174 aa8.75□□□□□ -1.01
PTCH1-217ENST00000548420 COX6A2Q02221 97 aa8.75□□□□□ -1.01
PTCH1-217ENST00000548420 C5orf38Q86SI9 138 aa8.75□□□□□ -1.01
PTCH1-217ENST00000548420 PRSS3P2Q8NHM4 247 aa8.75□□□□□ -1.01
PTCH1-217ENST00000548420 SPACA4Q8TDM5 124 aa8.75□□□□□ -1.01
PTCH1-217ENST00000548420 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
PTCH1-217ENST00000548420 AMELXQ99217 191 aa8.75□□□□□ -1.01
PTCH1-217ENST00000548420 IFITM10A6NMD0 228 aa8.74□□□□□ -1.01
PTCH1-217ENST00000548420 ZNF561-AS1K7EIQ3 104 aa8.74□□□□□ -1.01
PTCH1-217ENST00000548420 APOC3P02656 99 aa8.74□□□□□ -1.01
PTCH1-217ENST00000548420 MALP21145 153 aa8.74□□□□□ -1.01
PTCH1-217ENST00000548420 LINC00173Q6ZV60 143 aa8.74□□□□□ -1.01
PTCH1-217ENST00000548420 IGLV4-69A0A075B6H9 119 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 SNAPINO95295 136 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 CHTF8P0CG12 524 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 G0S2P27469 103 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 SYCNQ0VAF6 134 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 LINC00242Q5T6M2 205 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 SVBPQ8N300 66 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 TOMM6Q96B49 74 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 C2orf48Q96LS8 159 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
PTCH1-217ENST00000548420 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
PTCH1-217ENST00000548420 A0A087WYN8 130 aa8.72□□□□□ -1.01
PTCH1-217ENST00000548420 APOMO95445 188 aa8.72□□□□□ -1.01
PTCH1-217ENST00000548420 UBE2D1P51668 147 aa8.72□□□□□ -1.01
PTCH1-217ENST00000548420 TEX43Q6ZNM6 134 aa8.72□□□□□ -1.01
PTCH1-217ENST00000548420 FAM19A3Q7Z5A8 133 aa8.72□□□□□ -1.01
PTCH1-217ENST00000548420 OR10D4PQ8NGN7 298 aa8.72□□□□□ -1.01
PTCH1-217ENST00000548420 CARD19Q96LW7 228 aa8.72□□□□□ -1.01
PTCH1-217ENST00000548420 A0A087WZ39 114 aa8.71□□□□□ -1.02
PTCH1-217ENST00000548420 TGIF2-C20orf24A0A0A6YYL0 155 aa8.71□□□□□ -1.02
PTCH1-217ENST00000548420 FABP9Q0Z7S8 132 aa8.71□□□□□ -1.02
PTCH1-217ENST00000548420 NDUFA5Q16718 116 aa8.71□□□□□ -1.02
PTCH1-217ENST00000548420 TIMM17AQ99595 171 aa8.71□□□□□ -1.02
PTCH1-217ENST00000548420 VCX2Q9H322 139 aa8.71□□□□□ -1.02
PTCH1-217ENST00000548420 F8WDY8 70 aa8.7□□□□□ -1.02
PTCH1-217ENST00000548420 RNF151Q2KHN1 245 aa8.7□□□□□ -1.02
PTCH1-217ENST00000548420 ZC2HC1BQ5TFG8 222 aa8.7□□□□□ -1.02
PTCH1-217ENST00000548420 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
PTCH1-217ENST00000548420 YPEL4Q96NS1 127 aa8.7□□□□□ -1.02
PTCH1-217ENST00000548420 A0A096LNI7 61 aa8.69□□□□□ -1.02
PTCH1-217ENST00000548420 LINC01549A6NIU2 74 aa8.69□□□□□ -1.02
PTCH1-217ENST00000548420 Q6ZN92 141 aa8.69□□□□□ -1.02
PTCH1-217ENST00000548420 ERASQ7Z444 233 aa8.69□□□□□ -1.02
PTCH1-217ENST00000548420 PKIGQ9Y2B9 76 aa8.69□□□□□ -1.02
PTCH1-217ENST00000548420 SPAG11BQ08648 103 aa8.68□□□□□ -1.02
PTCH1-217ENST00000548420 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
PTCH1-217ENST00000548420 PAPPA-AS1Q5QFB9 102 aa8.68□□□□□ -1.02
PTCH1-217ENST00000548420 DPH3Q96FX2 82 aa8.68□□□□□ -1.02
PTCH1-217ENST00000548420 CAMK2N2Q96S95 79 aa8.68□□□□□ -1.02
PTCH1-217ENST00000548420 C2orf88Q9BSF0 95 aa8.68□□□□□ -1.02
PTCH1-217ENST00000548420 LINC00474Q9P2X8 69 aa8.68□□□□□ -1.02
PTCH1-217ENST00000548420 TRAPPC1Q9Y5R8 145 aa8.68□□□□□ -1.02
PTCH1-217ENST00000548420 MAJINQ3KP22 176 aa8.67□□□□□ -1.02
PTCH1-217ENST00000548420 ORAOV1Q8WV07 137 aa8.67□□□□□ -1.02
PTCH1-217ENST00000548420 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
PTCH1-217ENST00000548420 IGKV2-24A0A0C4DH68 120 aa8.66□□□□□ -1.02
PTCH1-217ENST00000548420 LOC107984640A0A0U1RRK4 108 aa8.66□□□□□ -1.02
PTCH1-217ENST00000548420 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-217ENST00000548420 PTTG1IPP53801 180 aa8.66□□□□□ -1.02
PTCH1-217ENST00000548420 STPG4Q8N801 248 aa8.66□□□□□ -1.02
PTCH1-217ENST00000548420 C18orf32Q8TCD1 76 aa8.66□□□□□ -1.02
PTCH1-217ENST00000548420 URB1-AS1Q96HZ7 61 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms