RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 C9orf85Q96MD7 179 aa8.69□□□□□ -1.02
RBFOX1-208ENST00000547372 ODF3BA8MYP8 253 aa8.69□□□□□ -1.02
RBFOX1-208ENST00000547372 RPL36AP83881 106 aaKnown RBP8.69□□□□□ -1.02
RBFOX1-208ENST00000547372 Q6JHZ5 121 aa8.69□□□□□ -1.02
RBFOX1-208ENST00000547372 RPL36ALQ969Q0 106 aaKnown RBP8.69□□□□□ -1.02
RBFOX1-208ENST00000547372 NAV2Q8IVL1 2488 aa8.69□□□□□ -1.02
RBFOX1-208ENST00000547372 HIST2H2BCQ6DN03 193 aa8.68□□□□□ -1.02
RBFOX1-208ENST00000547372 HIST2H2BDQ6DRA6 164 aa8.68□□□□□ -1.02
RBFOX1-208ENST00000547372 TMEM86BQ8N661 226 aa8.68□□□□□ -1.02
RBFOX1-208ENST00000547372 USMG5Q96IX5 58 aa8.68□□□□□ -1.02
RBFOX1-208ENST00000547372 TRGV1A0A0A0MS02 117 aa8.68□□□□□ -1.02
RBFOX1-208ENST00000547372 NDUFC2O95298 119 aa8.68□□□□□ -1.02
RBFOX1-208ENST00000547372 COX6A2Q02221 97 aa8.68□□□□□ -1.02
RBFOX1-208ENST00000547372 UBE2D4Q9Y2X8 147 aa8.68□□□□□ -1.02
RBFOX1-208ENST00000547372 CELSR1Q9NYQ6 3014 aa8.67□□□□□ -1.02
RBFOX1-208ENST00000547372 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-208ENST00000547372 C5orf56Q8N8D9 126 aa8.67□□□□□ -1.02
RBFOX1-208ENST00000547372 ZFYVE26Q68DK2 2539 aa8.67□□□□□ -1.02
RBFOX1-208ENST00000547372 SS18Q15532 418 aa8.67□□□□□ -1.02
RBFOX1-208ENST00000547372 BEAN1Q3B7T3 259 aa8.67□□□□□ -1.02
RBFOX1-208ENST00000547372 RMI2Q96E14 147 aa8.66□□□□□ -1.02
RBFOX1-208ENST00000547372 LINC00467Q9BRT7 94 aa8.66□□□□□ -1.02
RBFOX1-208ENST00000547372 CDSNQ15517 529 aa8.66□□□□□ -1.02
RBFOX1-208ENST00000547372 NDUFA1O15239 70 aa8.65□□□□□ -1.02
RBFOX1-208ENST00000547372 HAMPP81172 84 aa8.65□□□□□ -1.02
RBFOX1-208ENST00000547372 APRG1Q8IVJ8 170 aa8.65□□□□□ -1.02
RBFOX1-208ENST00000547372 C11orf44Q8N8P7 122 aa8.65□□□□□ -1.02
RBFOX1-208ENST00000547372 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.02
RBFOX1-208ENST00000547372 PSMB8P28062 276 aa8.64□□□□□ -1.03
RBFOX1-208ENST00000547372 CFHR3Q02985 330 aa8.64□□□□□ -1.03
RBFOX1-208ENST00000547372 MIR7-3HGQ8N6C7 128 aa8.64□□□□□ -1.03
RBFOX1-208ENST00000547372 TRGV2A0A075B6R0 118 aa8.64□□□□□ -1.03
RBFOX1-208ENST00000547372 F8WEM9 126 aa8.64□□□□□ -1.03
RBFOX1-208ENST00000547372 IL17DQ8TAD2 202 aa8.64□□□□□ -1.03
RBFOX1-208ENST00000547372 ABCA12Q86UK0 2595 aa8.64□□□□□ -1.03
RBFOX1-208ENST00000547372 TIMM17BO60830 172 aa8.63□□□□□ -1.03
RBFOX1-208ENST00000547372 FAM222AQ5U5X8 452 aa8.63□□□□□ -1.03
RBFOX1-208ENST00000547372 SMIM11BQ8TCY0 68 aa8.63□□□□□ -1.03
RBFOX1-208ENST00000547372 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
RBFOX1-208ENST00000547372 KLLNB2CW77 178 aa8.63□□□□□ -1.03
RBFOX1-208ENST00000547372 FAM104AQ969W3 186 aa8.63□□□□□ -1.03
RBFOX1-208ENST00000547372 K7ENP7 123 aa8.62□□□□□ -1.03
RBFOX1-208ENST00000547372 C6orf226Q5I0X4 101 aa8.62□□□□□ -1.03
RBFOX1-208ENST00000547372 AVPP01185 164 aa8.62□□□□□ -1.03
RBFOX1-208ENST00000547372 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
RBFOX1-208ENST00000547372 SMIM26A0A096LP01 95 aa8.62□□□□□ -1.03
RBFOX1-208ENST00000547372 TRAV13-2A0A0B4J235 113 aa8.61□□□□□ -1.03
RBFOX1-208ENST00000547372 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
RBFOX1-208ENST00000547372 SIRPDQ9H106 197 aa8.61□□□□□ -1.03
RBFOX1-208ENST00000547372 MTORP42345 2549 aa8.61□□□□□ -1.03
RBFOX1-208ENST00000547372 IGHV4-38-2P0DP08 117 aa8.61□□□□□ -1.03
RBFOX1-208ENST00000547372 H7BZZ5 65 aa8.6□□□□□ -1.03
RBFOX1-208ENST00000547372 DEFB136Q30KP8 78 aa8.6□□□□□ -1.03
RBFOX1-208ENST00000547372 UBL5Q9BZL1 73 aa8.6□□□□□ -1.03
RBFOX1-208ENST00000547372 NBL1P41271 181 aa8.6□□□□□ -1.03
RBFOX1-208ENST00000547372 Q6ZTI0 123 aa8.6□□□□□ -1.03
RBFOX1-208ENST00000547372 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
RBFOX1-208ENST00000547372 Q8NA96 180 aa8.6□□□□□ -1.03
RBFOX1-208ENST00000547372 LAMTOR3Q9UHA4 124 aa8.6□□□□□ -1.03
RBFOX1-208ENST00000547372 Q6ZSN1 163 aa8.59□□□□□ -1.03
RBFOX1-208ENST00000547372 C10orf99Q6UWK7 81 aa8.59□□□□□ -1.03
RBFOX1-208ENST00000547372 TRBV7-6A0A0J9YX20 115 aa8.58□□□□□ -1.04
RBFOX1-208ENST00000547372 LYPD5Q6UWN5 251 aa8.58□□□□□ -1.04
RBFOX1-208ENST00000547372 A0A1W2PRX2 142 aa8.58□□□□□ -1.04
RBFOX1-208ENST00000547372 MAPK1IP1LQ8NDC0 245 aa8.58□□□□□ -1.04
RBFOX1-208ENST00000547372 ORMDL1Q9P0S3 153 aa8.58□□□□□ -1.04
RBFOX1-208ENST00000547372 KLK9Q2XQG4 91 aa8.58□□□□□ -1.04
RBFOX1-208ENST00000547372 NDUFC2-KCTD14E9PQ53 114 aa8.57□□□□□ -1.04
RBFOX1-208ENST00000547372 LINC00242Q5T6M2 205 aa8.57□□□□□ -1.04
RBFOX1-208ENST00000547372 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
RBFOX1-208ENST00000547372 LRCOL1A6NCL2 159 aa8.57□□□□□ -1.04
RBFOX1-208ENST00000547372 TRGV4A0A0C4DH28 118 aa8.57□□□□□ -1.04
RBFOX1-208ENST00000547372 STHQ8IWL8 128 aa8.57□□□□□ -1.04
RBFOX1-208ENST00000547372 CLPSL2Q6UWE3 100 aa8.56□□□□□ -1.04
RBFOX1-208ENST00000547372 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
RBFOX1-208ENST00000547372 ZFHX3Q15911 3703 aa8.56□□□□□ -1.04
RBFOX1-208ENST00000547372 TRAV10A0A0B4J240 114 aa8.56□□□□□ -1.04
RBFOX1-208ENST00000547372 CCKP06307 115 aa8.56□□□□□ -1.04
RBFOX1-208ENST00000547372 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
RBFOX1-208ENST00000547372 LRRK2Q5S007 2527 aa8.55□□□□□ -1.04
RBFOX1-208ENST00000547372 OVOL2Q9BRP0 275 aa8.54□□□□□ -1.04
RBFOX1-208ENST00000547372 IGKV2-28A0A075B6P5 120 aa8.54□□□□□ -1.04
RBFOX1-208ENST00000547372 H0YGX0 51 aa8.54□□□□□ -1.04
RBFOX1-208ENST00000547372 IGKV2D-28P01615 120 aa8.54□□□□□ -1.04
RBFOX1-208ENST00000547372 C16orf95Q9H693 158 aa8.54□□□□□ -1.04
RBFOX1-208ENST00000547372 EPG5Q9HCE0 2579 aa8.54□□□□□ -1.04
RBFOX1-208ENST00000547372 IGHV4-59P01825 116 aa8.53□□□□□ -1.04
RBFOX1-208ENST00000547372 C11orf72Q8NBR9 251 aa8.53□□□□□ -1.04
RBFOX1-208ENST00000547372 INSP01308 110 aa8.53□□□□□ -1.04
RBFOX1-208ENST00000547372 A0A087WZ39 114 aa8.52□□□□□ -1.05
RBFOX1-208ENST00000547372 IGHV4-61A0A0C4DH41 118 aa8.52□□□□□ -1.05
RBFOX1-208ENST00000547372 DAD1P61803 113 aa8.52□□□□□ -1.05
RBFOX1-208ENST00000547372 CCL19Q99731 98 aa8.52□□□□□ -1.05
RBFOX1-208ENST00000547372 LMO4P61968 165 aa8.52□□□□□ -1.05
RBFOX1-208ENST00000547372 PRR3P79522 188 aaKnown RBP8.52□□□□□ -1.05
RBFOX1-208ENST00000547372 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
RBFOX1-208ENST00000547372 SLURP1P55000 103 aa8.51□□□□□ -1.05
RBFOX1-208ENST00000547372 PRB2P02812 416 aaPredicted RBP8.51□□□□□ -1.05
RBFOX1-208ENST00000547372 CSMD2Q7Z408 3487 aa8.51□□□□□ -1.05
RBFOX1-208ENST00000547372 A0A096LPF7 62 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms