RNA–Protein interactions for RNA: ENST00000547052.1

BRF1-209, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-209ENST00000547052 LINC00242Q5T6M2 205 aa11.74□□□□□ -0.53
BRF1-209ENST00000547052 OR10D4PQ8NGN7 298 aa11.74□□□□□ -0.53
BRF1-209ENST00000547052 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
BRF1-209ENST00000547052 HSPB8Q9UJY1 196 aa11.74□□□□□ -0.53
BRF1-209ENST00000547052 PDZD11Q5EBL8 140 aa11.73□□□□□ -0.53
BRF1-209ENST00000547052 LINC00173Q6ZV60 143 aa11.73□□□□□ -0.53
BRF1-209ENST00000547052 C15orf56Q8N910 161 aa11.73□□□□□ -0.53
BRF1-209ENST00000547052 IFI27L1Q96BM0 104 aa11.73□□□□□ -0.53
BRF1-209ENST00000547052 CST9LQ9H4G1 147 aa11.73□□□□□ -0.53
BRF1-209ENST00000547052 FAT2Q9NYQ8 4349 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 IGHV3OR16-9A0A0B4J2B5 98 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 H3BRM9 83 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST1H2BKO60814 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 LEPROTL1O95214 131 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST1H2BJP06899 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST1H2BOP23527 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST1H2BBP33778 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST1H2BDP58876 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST1H2BCP62807 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST2H2BEQ16778 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.72□□□□□ -0.53
BRF1-209ENST00000547052 LINC01561Q8N1V8 128 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST1H2BHQ93079 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST1H2BNQ99877 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 HIST1H2BMQ99879 126 aa11.72□□□□□ -0.53
BRF1-209ENST00000547052 A0A087WZ39 114 aa11.71□□□□□ -0.53
BRF1-209ENST00000547052 A0A096LNJ9 63 aa11.71□□□□□ -0.53
BRF1-209ENST00000547052 TINCRA0A1B0GVN0 87 aa11.71□□□□□ -0.53
BRF1-209ENST00000547052 PRSS2P07478 247 aa11.71□□□□□ -0.53
BRF1-209ENST00000547052 CNBPP62633 177 aaKnown RBP11.71□□□□□ -0.53
BRF1-209ENST00000547052 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.53
BRF1-209ENST00000547052 FAM19A3Q7Z5A8 133 aa11.71□□□□□ -0.53
BRF1-209ENST00000547052 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.53
BRF1-209ENST00000547052 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.53
BRF1-209ENST00000547052 SPAG11BQ08648 103 aa11.7□□□□□ -0.54
BRF1-209ENST00000547052 FAM19A2Q8N3H0 131 aa11.7□□□□□ -0.54
BRF1-209ENST00000547052 F8WDY8 70 aa11.69□□□□□ -0.54
BRF1-209ENST00000547052 CAMK2N2Q96S95 79 aa11.69□□□□□ -0.54
BRF1-209ENST00000547052 HECTD4Q9Y4D8 3996 aa11.69□□□□□ -0.54
BRF1-209ENST00000547052 IGHV3-64A0A075B6Q5 118 aa11.68□□□□□ -0.54
BRF1-209ENST00000547052 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
BRF1-209ENST00000547052 FUSP35637 526 aaKnown RBP eCLIP11.68□□□□□ -0.54
BRF1-209ENST00000547052 CARD19Q96LW7 228 aa11.68□□□□□ -0.54
BRF1-209ENST00000547052 SYCNQ0VAF6 134 aa11.67□□□□□ -0.54
BRF1-209ENST00000547052 C2orf48Q96LS8 159 aa11.67□□□□□ -0.54
BRF1-209ENST00000547052 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
BRF1-209ENST00000547052 TRAV12-1A0A0B4J245 112 aa11.66□□□□□ -0.54
BRF1-209ENST00000547052 NDUFA1O15239 70 aa11.66□□□□□ -0.54
BRF1-209ENST00000547052 COX6A2Q02221 97 aa11.66□□□□□ -0.54
BRF1-209ENST00000547052 C9orf163Q8N9P6 203 aa11.66□□□□□ -0.54
BRF1-209ENST00000547052 CHTOPQ9Y3Y2 248 aaKnown RBP11.66□□□□□ -0.54
BRF1-209ENST00000547052 PKD1P98161 4303 aa11.66□□□□□ -0.54
BRF1-209ENST00000547052 IGLV4-69A0A075B6H9 119 aa11.65□□□□□ -0.54
BRF1-209ENST00000547052 H0Y8G0 127 aa11.65□□□□□ -0.54
BRF1-209ENST00000547052 IGLC3P0DOY3 106 aa11.65□□□□□ -0.54
BRF1-209ENST00000547052 FABP4P15090 132 aa11.65□□□□□ -0.54
BRF1-209ENST00000547052 MAP1LC3CQ9BXW4 147 aa11.65□□□□□ -0.54
BRF1-209ENST00000547052 CDKN2A-AS1Q9UH64 79 aa11.65□□□□□ -0.54
BRF1-209ENST00000547052 CKS1BP61024 79 aa11.64□□□□□ -0.55
BRF1-209ENST00000547052 TOMM7Q9P0U1 55 aa11.64□□□□□ -0.55
BRF1-209ENST00000547052 S100A6P06703 90 aa11.63□□□□□ -0.55
BRF1-209ENST00000547052 C6orf226Q5I0X4 101 aa11.63□□□□□ -0.55
BRF1-209ENST00000547052 CDK2AP2O75956 126 aa11.62□□□□□ -0.55
BRF1-209ENST00000547052 CXCL5P42830 114 aa11.62□□□□□ -0.55
BRF1-209ENST00000547052 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
BRF1-209ENST00000547052 TMEM170BQ5T4T1 132 aa11.62□□□□□ -0.55
BRF1-209ENST00000547052 IGLV5-45A0A087WSX0 123 aa11.61□□□□□ -0.55
BRF1-209ENST00000547052 F8VRH5 84 aa11.61□□□□□ -0.55
BRF1-209ENST00000547052 LINC00310P59036 64 aa11.61□□□□□ -0.55
BRF1-209ENST00000547052 Q8IZM0 81 aa11.61□□□□□ -0.55
BRF1-209ENST00000547052 LINC00526Q96FQ7 95 aa11.61□□□□□ -0.55
BRF1-209ENST00000547052 DPH3Q96FX2 82 aa11.6□□□□□ -0.55
BRF1-209ENST00000547052 LINC00474Q9P2X8 69 aa11.6□□□□□ -0.55
BRF1-209ENST00000547052 PKHD1P08F94 4074 aa11.6□□□□□ -0.55
BRF1-209ENST00000547052 NUPR1O60356 82 aa11.59□□□□□ -0.55
BRF1-209ENST00000547052 PLNP26678 52 aa11.59□□□□□ -0.55
BRF1-209ENST00000547052 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
BRF1-209ENST00000547052 COA6Q5JTJ3 125 aaKnown RBP11.59□□□□□ -0.55
BRF1-209ENST00000547052 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.56
BRF1-209ENST00000547052 SPINK8P0C7L1 97 aa11.58□□□□□ -0.56
BRF1-209ENST00000547052 S100A2P29034 98 aa11.58□□□□□ -0.56
BRF1-209ENST00000547052 RNF151Q2KHN1 245 aa11.58□□□□□ -0.56
BRF1-209ENST00000547052 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.56
BRF1-209ENST00000547052 TRBV30A0A0K0K1B3 111 aa11.57□□□□□ -0.56
BRF1-209ENST00000547052 SMIM1B2RUZ4 78 aa11.57□□□□□ -0.56
BRF1-209ENST00000547052 ZNF22P17026 224 aaPredicted RBP11.57□□□□□ -0.56
BRF1-209ENST00000547052 Q6ZRU5 148 aa11.57□□□□□ -0.56
BRF1-209ENST00000547052 COX7B2Q8TF08 81 aa11.57□□□□□ -0.56
BRF1-209ENST00000547052 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
BRF1-209ENST00000547052 SLPIP03973 132 aa11.56□□□□□ -0.56
BRF1-209ENST00000547052 SFTA2Q6UW10 78 aa11.56□□□□□ -0.56
BRF1-209ENST00000547052 HERVK_113P61574 105 aa11.55□□□□□ -0.56
BRF1-209ENST00000547052 RPL18AQ02543 176 aaKnown RBP11.55□□□□□ -0.56
BRF1-209ENST00000547052 C20orf202A1L168 122 aa11.54□□□□□ -0.56
BRF1-209ENST00000547052 DPM2O94777 84 aa11.54□□□□□ -0.56
BRF1-209ENST00000547052 ODF1Q14990 250 aa11.54□□□□□ -0.56
BRF1-209ENST00000547052 AKR1D1P51857 326 aa11.53□□□□□ -0.56
BRF1-209ENST00000547052 SDIM1Q6ZPB5 146 aa11.53□□□□□ -0.56
BRF1-209ENST00000547052 DNAH11Q96DT5 4516 aa11.52□□□□□ -0.56
BRF1-209ENST00000547052 IGKV2-24A0A0C4DH68 120 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms