RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 SRSF3P84103 164 aaKnown RBP11.58□□□□□ -0.56
CHPT1-202ENST00000546490 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
CHPT1-202ENST00000546490 RNF151Q2KHN1 245 aa11.58□□□□□ -0.56
CHPT1-202ENST00000546490 C9orf116Q5BN46 136 aaPredicted RBP11.58□□□□□ -0.56
CHPT1-202ENST00000546490 ORAOV1Q8WV07 137 aa11.58□□□□□ -0.56
CHPT1-202ENST00000546490 A0A1B0GXF2 115 aa11.57□□□□□ -0.56
CHPT1-202ENST00000546490 A0A1W2PNN7 141 aa11.57□□□□□ -0.56
CHPT1-202ENST00000546490 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
CHPT1-202ENST00000546490 NPYP01303 97 aa11.57□□□□□ -0.56
CHPT1-202ENST00000546490 PPBPP02775 128 aa11.57□□□□□ -0.56
CHPT1-202ENST00000546490 MRPS36P82909 103 aaKnown RBP11.57□□□□□ -0.56
CHPT1-202ENST00000546490 F8WDY8 70 aa11.56□□□□□ -0.56
CHPT1-202ENST00000546490 MT-ND6P03923 174 aa11.56□□□□□ -0.56
CHPT1-202ENST00000546490 OPRPNQ99935 248 aaPredicted RBP11.56□□□□□ -0.56
CHPT1-202ENST00000546490 MRPL35Q9NZE8 188 aaKnown RBP11.56□□□□□ -0.56
CHPT1-202ENST00000546490 IGHV3OR16-9A0A0B4J2B5 98 aa11.55□□□□□ -0.56
CHPT1-202ENST00000546490 NDUFA1O15239 70 aa11.55□□□□□ -0.56
CHPT1-202ENST00000546490 FAM104AQ969W3 186 aa11.55□□□□□ -0.56
CHPT1-202ENST00000546490 PSORS1C2Q9UIG4 136 aa11.55□□□□□ -0.56
CHPT1-202ENST00000546490 A0A1B0GVG6 124 aa11.54□□□□□ -0.56
CHPT1-202ENST00000546490 IFI27P40305 119 aaPredicted RBP11.54□□□□□ -0.56
CHPT1-202ENST00000546490 KRTAP10-8P60410 259 aa11.54□□□□□ -0.56
CHPT1-202ENST00000546490 ATP5L2Q7Z4Y8 100 aa11.54□□□□□ -0.56
CHPT1-202ENST00000546490 ORMDL3Q8N138 153 aa11.54□□□□□ -0.56
CHPT1-202ENST00000546490 IMMP2LQ96T52 175 aa11.54□□□□□ -0.56
CHPT1-202ENST00000546490 TGIF2-C20orf24A0A0A6YYL0 155 aa11.53□□□□□ -0.56
CHPT1-202ENST00000546490 RAB5AP20339 215 aa11.53□□□□□ -0.56
CHPT1-202ENST00000546490 ODF1Q14990 250 aa11.53□□□□□ -0.56
CHPT1-202ENST00000546490 PHF5AQ7RTV0 110 aaKnown RBP11.52□□□□□ -0.57
CHPT1-202ENST00000546490 C1orf137Q5JT78 98 aa11.51□□□□□ -0.57
CHPT1-202ENST00000546490 PRELID3AQ96N28 172 aa11.51□□□□□ -0.57
CHPT1-202ENST00000546490 TMEM136Q6ZRR5 245 aa11.5□□□□□ -0.57
CHPT1-202ENST00000546490 TLX1NBP0CAT3 122 aa11.49□□□□□ -0.57
CHPT1-202ENST00000546490 PYGO1Q9Y3Y4 419 aa11.49□□□□□ -0.57
CHPT1-202ENST00000546490 A0A087WZ39 114 aa11.48□□□□□ -0.57
CHPT1-202ENST00000546490 C10orf25Q5T742 122 aa11.48□□□□□ -0.57
CHPT1-202ENST00000546490 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
CHPT1-202ENST00000546490 IGLV4-3A0A075B6K6 122 aa11.47□□□□□ -0.57
CHPT1-202ENST00000546490 UNQ6190/PRO20217Q6UXQ8 127 aa11.47□□□□□ -0.57
CHPT1-202ENST00000546490 TMEM141Q96I45 108 aa11.47□□□□□ -0.57
CHPT1-202ENST00000546490 LAMTOR2Q9Y2Q5 125 aa11.47□□□□□ -0.57
CHPT1-202ENST00000546490 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
CHPT1-202ENST00000546490 FAM19A5Q7Z5A7 132 aaPredicted RBP11.46□□□□□ -0.57
CHPT1-202ENST00000546490 MAP1LC3AQ9H492 121 aa11.46□□□□□ -0.57
CHPT1-202ENST00000546490 FAM168BA1KXE4 195 aa11.45□□□□□ -0.58
CHPT1-202ENST00000546490 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
CHPT1-202ENST00000546490 LINC00242Q5T6M2 205 aa11.45□□□□□ -0.58
CHPT1-202ENST00000546490 C2orf88Q9BSF0 95 aa11.45□□□□□ -0.58
CHPT1-202ENST00000546490 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
CHPT1-202ENST00000546490 RNF213Q63HN8 5207 aa11.44□□□□□ -0.58
CHPT1-202ENST00000546490 TRBV30A0A0K0K1B3 111 aa11.44□□□□□ -0.58
CHPT1-202ENST00000546490 PRSS47A8MTI9 375 aa11.44□□□□□ -0.58
CHPT1-202ENST00000546490 IGLV7-43P04211 117 aa11.44□□□□□ -0.58
CHPT1-202ENST00000546490 PNRC1Q12796 327 aaPredicted RBP11.44□□□□□ -0.58
CHPT1-202ENST00000546490 DIRC1Q969H9 104 aa11.44□□□□□ -0.58
CHPT1-202ENST00000546490 LOC389332A0A1B0GUA5 103 aa11.43□□□□□ -0.58
CHPT1-202ENST00000546490 KIAA0087Q14695 138 aa11.43□□□□□ -0.58
CHPT1-202ENST00000546490 Q6ZN92 141 aa11.43□□□□□ -0.58
CHPT1-202ENST00000546490 CYSLTR1Q9Y271 337 aa11.43□□□□□ -0.58
CHPT1-202ENST00000546490 UBE2D1P51668 147 aa11.42□□□□□ -0.58
CHPT1-202ENST00000546490 PACRGQ96M98 296 aaPredicted RBP11.42□□□□□ -0.58
CHPT1-202ENST00000546490 M0QXV9 152 aa11.41□□□□□ -0.58
CHPT1-202ENST00000546490 MT-ND4LP03901 98 aa11.41□□□□□ -0.58
CHPT1-202ENST00000546490 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
CHPT1-202ENST00000546490 LINC01561Q8N1V8 128 aa11.41□□□□□ -0.58
CHPT1-202ENST00000546490 Q8N8P6 123 aa11.41□□□□□ -0.58
CHPT1-202ENST00000546490 ANAPC16Q96DE5 110 aa11.41□□□□□ -0.58
CHPT1-202ENST00000546490 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.58
CHPT1-202ENST00000546490 UBE2BP63146 152 aa11.4□□□□□ -0.58
CHPT1-202ENST00000546490 ORMDL2Q53FV1 153 aa11.4□□□□□ -0.58
CHPT1-202ENST00000546490 C2orf82Q6UX34 121 aa11.4□□□□□ -0.58
CHPT1-202ENST00000546490 H0Y9J4 135 aa11.39□□□□□ -0.59
CHPT1-202ENST00000546490 KRTAP11-1Q8IUC1 163 aa11.39□□□□□ -0.59
CHPT1-202ENST00000546490 K7EMI3 77 aa11.38□□□□□ -0.59
CHPT1-202ENST00000546490 PRSS2P07478 247 aa11.38□□□□□ -0.59
CHPT1-202ENST00000546490 NPSP0C0P6 89 aa11.38□□□□□ -0.59
CHPT1-202ENST00000546490 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
CHPT1-202ENST00000546490 VCX2Q9H322 139 aa11.38□□□□□ -0.59
CHPT1-202ENST00000546490 AMELXQ99217 191 aa11.37□□□□□ -0.59
CHPT1-202ENST00000546490 ZC2HC1BQ5TFG8 222 aa11.36□□□□□ -0.59
CHPT1-202ENST00000546490 KRTAP7-1Q8IUC3 87 aa11.36□□□□□ -0.59
CHPT1-202ENST00000546490 PRR26Q8N8Z3 221 aa11.36□□□□□ -0.59
CHPT1-202ENST00000546490 NXT2Q9NPJ8 142 aaKnown RBP11.36□□□□□ -0.59
CHPT1-202ENST00000546490 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
CHPT1-202ENST00000546490 CKS1BP61024 79 aa11.35□□□□□ -0.59
CHPT1-202ENST00000546490 RAB14P61106 215 aa11.35□□□□□ -0.59
CHPT1-202ENST00000546490 C9orf129Q5T035 196 aaKnown RBP11.35□□□□□ -0.59
CHPT1-202ENST00000546490 PAPPA-AS1Q5QFB9 102 aa11.34□□□□□ -0.59
CHPT1-202ENST00000546490 Q8IZM0 81 aa11.34□□□□□ -0.59
CHPT1-202ENST00000546490 CTDSP1Q9GZU7 261 aa11.34□□□□□ -0.59
CHPT1-202ENST00000546490 IGLV1-50A0A075B6I6 118 aa11.33□□□□□ -0.6
CHPT1-202ENST00000546490 IGIPA6NJ69 53 aa11.33□□□□□ -0.6
CHPT1-202ENST00000546490 SEC11AP67812 179 aa11.33□□□□□ -0.6
CHPT1-202ENST00000546490 FAM19A3Q7Z5A8 133 aa11.33□□□□□ -0.6
CHPT1-202ENST00000546490 G0S2P27469 103 aa11.32□□□□□ -0.6
CHPT1-202ENST00000546490 HERVK_113P63121 156 aa11.32□□□□□ -0.6
CHPT1-202ENST00000546490 C6orf226Q5I0X4 101 aa11.32□□□□□ -0.6
CHPT1-202ENST00000546490 ALKBH7Q9BT30 221 aaPredicted RBP11.32□□□□□ -0.6
CHPT1-202ENST00000546490 TIMM17AQ99595 171 aa11.31□□□□□ -0.6
CHPT1-202ENST00000546490 GEMIN7Q9H840 131 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 2021.6 ms