RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 BCE1O60756 84 aa6.27□□□□□ -1.41
ATXN3-216ENST00000545170 GRNP28799 593 aaKnown RBP6.27□□□□□ -1.41
ATXN3-216ENST00000545170 FNDC1Q4ZHG4 1894 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-216ENST00000545170 ABCA1O95477 2261 aa6.26□□□□□ -1.41
ATXN3-216ENST00000545170 LINC00336Q6ZUF6 198 aa6.26□□□□□ -1.41
ATXN3-216ENST00000545170 MUC7Q8TAX7 377 aa6.26□□□□□ -1.41
ATXN3-216ENST00000545170 PRLHP81277 87 aa6.26□□□□□ -1.41
ATXN3-216ENST00000545170 IGFL3Q6UXB1 125 aa6.26□□□□□ -1.41
ATXN3-216ENST00000545170 LINC00474Q9P2X8 69 aa6.26□□□□□ -1.41
ATXN3-216ENST00000545170 LY6G6EA0A0G2JKS1 128 aa6.26□□□□□ -1.41
ATXN3-216ENST00000545170 U3KQA8 63 aa6.26□□□□□ -1.41
ATXN3-216ENST00000545170 ADAMTS9Q9P2N4 1935 aa6.26□□□□□ -1.41
ATXN3-216ENST00000545170 FSHBP01225 129 aa6.25□□□□□ -1.41
ATXN3-216ENST00000545170 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-216ENST00000545170 CYSRT1A8MQ03 144 aa6.25□□□□□ -1.41
ATXN3-216ENST00000545170 BBC3Q96PG8 261 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-216ENST00000545170 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
ATXN3-216ENST00000545170 TRAV10A0A0B4J240 114 aa6.24□□□□□ -1.41
ATXN3-216ENST00000545170 C11orf45Q8TAV5 145 aa6.24□□□□□ -1.41
ATXN3-216ENST00000545170 KIAA1549LQ6ZVL6 1849 aa6.24□□□□□ -1.41
ATXN3-216ENST00000545170 C7orf65Q6ZTY9 151 aa6.23□□□□□ -1.41
ATXN3-216ENST00000545170 CHCHD7Q9BUK0 85 aa6.23□□□□□ -1.41
ATXN3-216ENST00000545170 A8MUN3 132 aa6.23□□□□□ -1.41
ATXN3-216ENST00000545170 A0A087WSZ3 146 aa6.23□□□□□ -1.41
ATXN3-216ENST00000545170 COL4A3Q01955 1670 aa6.23□□□□□ -1.41
ATXN3-216ENST00000545170 ACYP2P14621 99 aa6.23□□□□□ -1.41
ATXN3-216ENST00000545170 UNQ6190/PRO20217Q6UXQ8 127 aa6.23□□□□□ -1.41
ATXN3-216ENST00000545170 LINC00574Q9H8X3 128 aa6.23□□□□□ -1.41
ATXN3-216ENST00000545170 A8MTW9 85 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 REG3GQ6UW15 175 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 ODF3BA8MYP8 253 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 Q6ZTC4 211 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 TM2D3Q9BRN9 247 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 ATG2AQ2TAZ0 1938 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 DOPEY2Q9Y3R5 2298 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 C2orf16Q68DN1 1984 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 MAP1BP46821 2468 aaKnown RBP6.22□□□□□ -1.41
ATXN3-216ENST00000545170 KLLNB2CW77 178 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 FSTL3O95633 263 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 SSBP3-AS1Q7Z2R9 100 aa6.22□□□□□ -1.41
ATXN3-216ENST00000545170 NCOA6Q14686 2063 aaPredicted RBP6.21□□□□□ -1.41
ATXN3-216ENST00000545170 IGLV2-18A0A075B6J9 118 aa6.21□□□□□ -1.41
ATXN3-216ENST00000545170 DEFB114Q30KQ6 69 aa6.21□□□□□ -1.42
ATXN3-216ENST00000545170 LCA10Q71F78 164 aa6.21□□□□□ -1.42
ATXN3-216ENST00000545170 AMELXQ99217 191 aa6.21□□□□□ -1.42
ATXN3-216ENST00000545170 Q9BRP9 147 aa6.21□□□□□ -1.42
ATXN3-216ENST00000545170 MED13Q9UHV7 2174 aa6.21□□□□□ -1.42
ATXN3-216ENST00000545170 PLA2G1BP04054 148 aaKnown RBP6.21□□□□□ -1.42
ATXN3-216ENST00000545170 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.42
ATXN3-216ENST00000545170 IGLV8-61A0A075B6I0 122 aa6.21□□□□□ -1.42
ATXN3-216ENST00000545170 MSMPQ1L6U9 139 aa6.21□□□□□ -1.42
ATXN3-216ENST00000545170 SPATA3Q8NHX4 192 aa6.21□□□□□ -1.42
ATXN3-216ENST00000545170 CIRBP-AS1Q8TBR5 109 aa6.2□□□□□ -1.42
ATXN3-216ENST00000545170 LINC00337Q8N6G1 96 aa6.2□□□□□ -1.42
ATXN3-216ENST00000545170 CEP192Q8TEP8 1941 aa6.2□□□□□ -1.42
ATXN3-216ENST00000545170 DEFB131BA0A096LNP1 70 aa6.19□□□□□ -1.42
ATXN3-216ENST00000545170 EP400Q96L91 3159 aa6.19□□□□□ -1.42
ATXN3-216ENST00000545170 C6orf48Q9UBA6 75 aa6.19□□□□□ -1.42
ATXN3-216ENST00000545170 LELP1Q5T871 98 aa6.19□□□□□ -1.42
ATXN3-216ENST00000545170 SMCR5Q8TEV8 140 aa6.19□□□□□ -1.42
ATXN3-216ENST00000545170 KPRPQ5T749 579 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-216ENST00000545170 C7orf33Q8WU49 177 aa6.19□□□□□ -1.42
ATXN3-216ENST00000545170 CYP4F30PQ9H0H9 118 aa6.19□□□□□ -1.42
ATXN3-216ENST00000545170 KIF26AQ9ULI4 1882 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-216ENST00000545170 WNK2Q9Y3S1 2297 aa6.18□□□□□ -1.42
ATXN3-216ENST00000545170 COL5A1P20908 1838 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-216ENST00000545170 ZNF702PQ9H963 129 aa6.18□□□□□ -1.42
ATXN3-216ENST00000545170 C2orf48Q96LS8 159 aa6.18□□□□□ -1.42
ATXN3-216ENST00000545170 FAM218AQ96MZ4 157 aa6.17□□□□□ -1.42
ATXN3-216ENST00000545170 IGLV4-60A0A075B6I1 120 aa6.16□□□□□ -1.42
ATXN3-216ENST00000545170 C6orf223Q8N319 242 aa6.16□□□□□ -1.42
ATXN3-216ENST00000545170 H3BS24 57 aa6.16□□□□□ -1.42
ATXN3-216ENST00000545170 LINC00482Q8N8I6 264 aa6.16□□□□□ -1.42
ATXN3-216ENST00000545170 PCNX3Q9H6A9 2034 aa6.16□□□□□ -1.42
ATXN3-216ENST00000545170 NHLRC4P0CG21 123 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-216ENST00000545170 EGFEM1PQ0D2K5 195 aa6.15□□□□□ -1.42
ATXN3-216ENST00000545170 SPTBN1Q01082 2364 aaKnown RBP6.15□□□□□ -1.42
ATXN3-216ENST00000545170 DEFB113Q30KQ7 82 aa6.15□□□□□ -1.42
ATXN3-216ENST00000545170 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.43
ATXN3-216ENST00000545170 IGKV2-30P06310 120 aa6.15□□□□□ -1.43
ATXN3-216ENST00000545170 Q6ZQT0 140 aa6.15□□□□□ -1.43
ATXN3-216ENST00000545170 PLXNB1O43157 2135 aa6.15□□□□□ -1.43
ATXN3-216ENST00000545170 IGF2-ASQ6U949 168 aa6.14□□□□□ -1.43
ATXN3-216ENST00000545170 LINC01546A6NGU7 62 aa6.14□□□□□ -1.43
ATXN3-216ENST00000545170 KIAA0087Q14695 138 aa6.14□□□□□ -1.43
ATXN3-216ENST00000545170 Q8N2B8 174 aa6.14□□□□□ -1.43
ATXN3-216ENST00000545170 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
ATXN3-216ENST00000545170 MALRD1Q5VYJ5 2156 aa6.14□□□□□ -1.43
ATXN3-216ENST00000545170 H3BPC8 53 aa6.13□□□□□ -1.43
ATXN3-216ENST00000545170 COA5Q86WW8 74 aa6.13□□□□□ -1.43
ATXN3-216ENST00000545170 FREM1Q5H8C1 2179 aa6.13□□□□□ -1.43
ATXN3-216ENST00000545170 FHL3Q13643 280 aa6.13□□□□□ -1.43
ATXN3-216ENST00000545170 WIPF1O43516 503 aa6.13□□□□□ -1.43
ATXN3-216ENST00000545170 PRR15Q8IV56 129 aa6.13□□□□□ -1.43
ATXN3-216ENST00000545170 C10orf99Q6UWK7 81 aa6.12□□□□□ -1.43
ATXN3-216ENST00000545170 PTPRZ1P23471 2315 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-216ENST00000545170 MRGPRG-AS1Q2M3A8 158 aa6.11□□□□□ -1.43
ATXN3-216ENST00000545170 LTBP1Q14766 1721 aa6.11□□□□□ -1.43
ATXN3-216ENST00000545170 APC2O95996 2303 aa6.11□□□□□ -1.43
ATXN3-216ENST00000545170 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms