RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TRAV9-1A0A075B6T8 112 aa4.77□□□□□ -1.65
CPSF7-224ENST00000544990 C1orf196B1AJZ1 125 aa4.77□□□□□ -1.65
CPSF7-224ENST00000544990 ADCYAP1P18509 176 aa4.77□□□□□ -1.65
CPSF7-224ENST00000544990 S100PP25815 95 aa4.77□□□□□ -1.65
CPSF7-224ENST00000544990 XCL1P47992 114 aa4.77□□□□□ -1.65
CPSF7-224ENST00000544990 CNBPP62633 177 aaKnown RBP4.77□□□□□ -1.65
CPSF7-224ENST00000544990 Q5VSD8 79 aa4.77□□□□□ -1.65
CPSF7-224ENST00000544990 CHAC1Q9BUX1 264 aa4.77□□□□□ -1.65
CPSF7-224ENST00000544990 MAP1LC3AQ9H492 121 aa4.77□□□□□ -1.65
CPSF7-224ENST00000544990 IGHV3-64A0A075B6Q5 118 aa4.76□□□□□ -1.65
CPSF7-224ENST00000544990 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
CPSF7-224ENST00000544990 CD164L2Q6UWJ8 174 aa4.76□□□□□ -1.65
CPSF7-224ENST00000544990 C15orf56Q8N910 161 aa4.76□□□□□ -1.65
CPSF7-224ENST00000544990 SPANXA1Q9NS26 97 aa4.76□□□□□ -1.65
CPSF7-224ENST00000544990 TRAV13-1A0A0B4J241 112 aa4.75□□□□□ -1.65
CPSF7-224ENST00000544990 IGHV1-58A0A0C4DH39 117 aa4.75□□□□□ -1.65
CPSF7-224ENST00000544990 LOC389332A0A1B0GUA5 103 aa4.75□□□□□ -1.65
CPSF7-224ENST00000544990 IFI27P40305 119 aaPredicted RBP4.75□□□□□ -1.65
CPSF7-224ENST00000544990 RPL39P62891 51 aaKnown RBP4.75□□□□□ -1.65
CPSF7-224ENST00000544990 COX19Q49B96 90 aa4.75□□□□□ -1.65
CPSF7-224ENST00000544990 HIGD2BQ4VC39 106 aa4.75□□□□□ -1.65
CPSF7-224ENST00000544990 SCXQ7RTU7 201 aa4.75□□□□□ -1.65
CPSF7-224ENST00000544990 GVQW2A0A096LPI5 108 aaPredicted RBP4.74□□□□□ -1.65
CPSF7-224ENST00000544990 K7EMI3 77 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 APOMO95445 188 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 INAFM2P0DMQ5 153 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 G0S2P27469 103 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 MRPS36P82909 103 aaKnown RBP4.74□□□□□ -1.65
CPSF7-224ENST00000544990 RHEBQ15382 184 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 ORMDL2Q53FV1 153 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 RNASE13Q5GAN3 156 aaKnown RBP4.74□□□□□ -1.65
CPSF7-224ENST00000544990 C10orf91Q5T1B1 145 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 SDIM1Q6ZPB5 146 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 Q6ZUT4 128 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 Q8N8P6 123 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 CIRBP-AS1Q8TBR5 109 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 DPH3Q96FX2 82 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 RPS10P5Q9NQ39 176 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 PKIGQ9Y2B9 76 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 CARHSP1Q9Y2V2 147 aaKnown RBP4.74□□□□□ -1.65
CPSF7-224ENST00000544990 HSPG2P98160 4391 aa4.74□□□□□ -1.65
CPSF7-224ENST00000544990 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
CPSF7-224ENST00000544990 COX7A2LO14548 114 aa4.73□□□□□ -1.65
CPSF7-224ENST00000544990 NDUFA5Q16718 116 aa4.73□□□□□ -1.65
CPSF7-224ENST00000544990 GNB1LQ9BYB4 327 aa4.73□□□□□ -1.65
CPSF7-224ENST00000544990 NXT2Q9NPJ8 142 aaKnown RBP4.73□□□□□ -1.65
CPSF7-224ENST00000544990 CYSLTR1Q9Y271 337 aa4.73□□□□□ -1.65
CPSF7-224ENST00000544990 PYGO1Q9Y3Y4 419 aa4.73□□□□□ -1.65
CPSF7-224ENST00000544990 KIAA1644Q3SXP7 199 aa4.72□□□□□ -1.65
CPSF7-224ENST00000544990 C2orf66Q6UXQ4 117 aa4.72□□□□□ -1.65
CPSF7-224ENST00000544990 URB1-AS1Q96HZ7 61 aa4.72□□□□□ -1.65
CPSF7-224ENST00000544990 TMEM141Q96I45 108 aa4.72□□□□□ -1.65
CPSF7-224ENST00000544990 OPRPNQ99935 248 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-224ENST00000544990 IFITM10A6NMD0 228 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 SNAPINO95295 136 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 APOC3P02656 99 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 MT-ND6P03923 174 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 COX6A2Q02221 97 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 SYCNQ0VAF6 134 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 Q6ZN92 141 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 TEX43Q6ZNM6 134 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 C5orf38Q86SI9 138 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 CARD19Q96LW7 228 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 C2orf88Q9BSF0 95 aa4.71□□□□□ -1.66
CPSF7-224ENST00000544990 IGLV4-69A0A075B6H9 119 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 IGLV4-3A0A075B6K6 122 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 TGIF2-C20orf24A0A0A6YYL0 155 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 LINC01549A6NIU2 74 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 FABP9Q0Z7S8 132 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 CIRBPQ14011 172 aaKnown RBP4.7□□□□□ -1.66
CPSF7-224ENST00000544990 PAPPA-AS1Q5QFB9 102 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 SVBPQ8N300 66 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 FAM104AQ969W3 186 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 LINC00526Q96FQ7 95 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 C2orf48Q96LS8 159 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 CAMK2N2Q96S95 79 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 VCX2Q9H322 139 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 LINC00474Q9P2X8 69 aa4.7□□□□□ -1.66
CPSF7-224ENST00000544990 A0A087WYN8 130 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 IGHV3OR16-9A0A0B4J2B5 98 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 IGKV2-24A0A0C4DH68 120 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 F8WDY8 70 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 PANO1I0J062 215 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 PRSS2P07478 247 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 CHTF8P0CG12 524 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 MAJINQ3KP22 176 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 OR10D4PQ8NGN7 298 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 SPACA4Q8TDM5 124 aa4.69□□□□□ -1.66
CPSF7-224ENST00000544990 ALKBH7Q9BT30 221 aaPredicted RBP4.69□□□□□ -1.66
CPSF7-224ENST00000544990 LOC107984640A0A0U1RRK4 108 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 IGIPA6NJ69 53 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 RPL37AP61513 92 aaKnown RBP4.68□□□□□ -1.66
CPSF7-224ENST00000544990 SEC11AP67812 179 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 SPAG11BQ08648 103 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 LINC00242Q5T6M2 205 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 Q6ZRU5 148 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 FA2HQ7L5A8 372 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 ORAOV1Q8WV07 137 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 TOMM6Q96B49 74 aa4.68□□□□□ -1.66
CPSF7-224ENST00000544990 AMELXQ99217 191 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms