RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ORMDL3Q8N138 153 aa10.12□□□□□ -0.79
DDX55-212ENST00000544738 LINC01600Q96MT4 127 aa10.12□□□□□ -0.79
DDX55-212ENST00000544738 RAB5AP20339 215 aa10.11□□□□□ -0.79
DDX55-212ENST00000544738 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
DDX55-212ENST00000544738 TMEM136Q6ZRR5 245 aa10.11□□□□□ -0.79
DDX55-212ENST00000544738 OR10D4PQ8NGN7 298 aa10.11□□□□□ -0.79
DDX55-212ENST00000544738 F8WDY8 70 aa10.1□□□□□ -0.79
DDX55-212ENST00000544738 PNRC1Q12796 327 aaPredicted RBP10.1□□□□□ -0.79
DDX55-212ENST00000544738 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
DDX55-212ENST00000544738 RNF151Q2KHN1 245 aa10.1□□□□□ -0.79
DDX55-212ENST00000544738 RAB14P61106 215 aa10.09□□□□□ -0.79
DDX55-212ENST00000544738 PRELID3AQ96N28 172 aa10.09□□□□□ -0.79
DDX55-212ENST00000544738 KRTAP9-6A0A140TA67 174 aa10.08□□□□□ -0.8
DDX55-212ENST00000544738 MT-ND4LP03901 98 aa10.08□□□□□ -0.8
DDX55-212ENST00000544738 IFI27P40305 119 aaPredicted RBP10.08□□□□□ -0.8
DDX55-212ENST00000544738 SPAG11BQ08648 103 aa10.08□□□□□ -0.8
DDX55-212ENST00000544738 Q6ZRP5 223 aa10.08□□□□□ -0.8
DDX55-212ENST00000544738 FAM104AQ969W3 186 aa10.08□□□□□ -0.8
DDX55-212ENST00000544738 LAMTOR2Q9Y2Q5 125 aa10.08□□□□□ -0.8
DDX55-212ENST00000544738 IGHV3OR16-9A0A0B4J2B5 98 aa10.07□□□□□ -0.8
DDX55-212ENST00000544738 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
DDX55-212ENST00000544738 PRSS47A8MTI9 375 aa10.07□□□□□ -0.8
DDX55-212ENST00000544738 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
DDX55-212ENST00000544738 ANAPC16Q96DE5 110 aa10.07□□□□□ -0.8
DDX55-212ENST00000544738 OPRPNQ99935 248 aaPredicted RBP10.07□□□□□ -0.8
DDX55-212ENST00000544738 PYGO1Q9Y3Y4 419 aa10.07□□□□□ -0.8
DDX55-212ENST00000544738 ORAOV1Q8WV07 137 aa10.06□□□□□ -0.8
DDX55-212ENST00000544738 MUC2Q02817 5179 aa10.06□□□□□ -0.8
DDX55-212ENST00000544738 TGIF2-C20orf24A0A0A6YYL0 155 aa10.05□□□□□ -0.8
DDX55-212ENST00000544738 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.05□□□□□ -0.8
DDX55-212ENST00000544738 RPL18AQ02543 176 aaKnown RBP10.05□□□□□ -0.8
DDX55-212ENST00000544738 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
DDX55-212ENST00000544738 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
DDX55-212ENST00000544738 NDUFA1O15239 70 aa10.04□□□□□ -0.8
DDX55-212ENST00000544738 REG3GQ6UW15 175 aa10.04□□□□□ -0.8
DDX55-212ENST00000544738 IMMP2LQ96T52 175 aa10.04□□□□□ -0.8
DDX55-212ENST00000544738 MAP1LC3AQ9H492 121 aa10.04□□□□□ -0.8
DDX55-212ENST00000544738 A0A1W2PNN7 141 aa10.03□□□□□ -0.8
DDX55-212ENST00000544738 KRTAP10-8P60410 259 aa10.03□□□□□ -0.8
DDX55-212ENST00000544738 C9orf116Q5BN46 136 aaPredicted RBP10.03□□□□□ -0.8
DDX55-212ENST00000544738 TMEM141Q96I45 108 aa10.03□□□□□ -0.8
DDX55-212ENST00000544738 SRSF9Q13242 221 aaKnown RBP eCLIP10.02□□□□□ -0.811e-6■■■■□ 21.5
DDX55-212ENST00000544738 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
DDX55-212ENST00000544738 A0A087WZ39 114 aa10.01□□□□□ -0.81
DDX55-212ENST00000544738 LOC389332A0A1B0GUA5 103 aa10.01□□□□□ -0.81
DDX55-212ENST00000544738 K7EMI3 77 aa10.01□□□□□ -0.81
DDX55-212ENST00000544738 TEX43Q6ZNM6 134 aa10.01□□□□□ -0.81
DDX55-212ENST00000544738 Q8N8P6 123 aa10.01□□□□□ -0.81
DDX55-212ENST00000544738 CYSLTR1Q9Y271 337 aa10.01□□□□□ -0.81
DDX55-212ENST00000544738 FAT4Q6V0I7 4981 aa10□□□□□ -0.81
DDX55-212ENST00000544738 ORMDL2Q53FV1 153 aa10□□□□□ -0.81
DDX55-212ENST00000544738 LINC00242Q5T6M2 205 aa10□□□□□ -0.81
DDX55-212ENST00000544738 NPSP0C0P6 89 aa9.99□□□□□ -0.81
DDX55-212ENST00000544738 TLX1NBP0CAT3 122 aa9.99□□□□□ -0.81
DDX55-212ENST00000544738 C2orf66Q6UXQ4 117 aa9.99□□□□□ -0.81
DDX55-212ENST00000544738 UNQ6190/PRO20217Q6UXQ8 127 aa9.99□□□□□ -0.81
DDX55-212ENST00000544738 Q6ZN92 141 aa9.99□□□□□ -0.81
DDX55-212ENST00000544738 C2orf88Q9BSF0 95 aa9.99□□□□□ -0.81
DDX55-212ENST00000544738 MT-ND6P03923 174 aa9.98□□□□□ -0.81
DDX55-212ENST00000544738 CTDSP1Q9GZU7 261 aa9.98□□□□□ -0.81
DDX55-212ENST00000544738 G0S2P27469 103 aa9.97□□□□□ -0.81
DDX55-212ENST00000544738 KIAA0087Q14695 138 aa9.97□□□□□ -0.81
DDX55-212ENST00000544738 CLLU1Q5K131 121 aa9.97□□□□□ -0.81
DDX55-212ENST00000544738 C10orf25Q5T742 122 aa9.97□□□□□ -0.81
DDX55-212ENST00000544738 LINC01561Q8N1V8 128 aa9.97□□□□□ -0.81
DDX55-212ENST00000544738 VCX2Q9H322 139 aa9.97□□□□□ -0.81
DDX55-212ENST00000544738 NXT2Q9NPJ8 142 aaKnown RBP9.97□□□□□ -0.81
DDX55-212ENST00000544738 C6orf48Q9UBA6 75 aa9.97□□□□□ -0.81
DDX55-212ENST00000544738 PSORS1C2Q9UIG4 136 aa9.97□□□□□ -0.81
DDX55-212ENST00000544738 UBE2D1P51668 147 aa9.96□□□□□ -0.82
DDX55-212ENST00000544738 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.82
DDX55-212ENST00000544738 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
DDX55-212ENST00000544738 PHF5AQ7RTV0 110 aaKnown RBP9.95□□□□□ -0.82
DDX55-212ENST00000544738 AMELXQ99217 191 aa9.95□□□□□ -0.82
DDX55-212ENST00000544738 UQCC3Q6UW78 93 aa9.94□□□□□ -0.82
DDX55-212ENST00000544738 PACRGQ96M98 296 aaPredicted RBP9.94□□□□□ -0.82
DDX55-212ENST00000544738 IGIPA6NJ69 53 aa9.93□□□□□ -0.82
DDX55-212ENST00000544738 SEC11AP67812 179 aa9.93□□□□□ -0.82
DDX55-212ENST00000544738 GAGE2EQ4V326 116 aa9.93□□□□□ -0.82
DDX55-212ENST00000544738 C1orf137Q5JT78 98 aa9.93□□□□□ -0.82
DDX55-212ENST00000544738 LINC00173Q6ZV60 143 aa9.93□□□□□ -0.82
DDX55-212ENST00000544738 GAGE2DQ9UEU5 116 aa9.93□□□□□ -0.82
DDX55-212ENST00000544738 TRAV9-1A0A075B6T8 112 aa9.92□□□□□ -0.82
DDX55-212ENST00000544738 NDUFC2-KCTD14E9PQ53 114 aa9.92□□□□□ -0.82
DDX55-212ENST00000544738 PRSS2P07478 247 aa9.92□□□□□ -0.82
DDX55-212ENST00000544738 C2orf82Q6UX34 121 aa9.92□□□□□ -0.82
DDX55-212ENST00000544738 FAM19A3Q7Z5A8 133 aa9.92□□□□□ -0.82
DDX55-212ENST00000544738 A0A0U1RQV1 116 aa9.91□□□□□ -0.82
DDX55-212ENST00000544738 FAM168BA1KXE4 195 aa9.91□□□□□ -0.82
DDX55-212ENST00000544738 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
DDX55-212ENST00000544738 TMEM218A2RU14 115 aa9.9□□□□□ -0.82
DDX55-212ENST00000544738 CKS1BP61024 79 aa9.9□□□□□ -0.82
DDX55-212ENST00000544738 HERVK_113P63121 156 aa9.9□□□□□ -0.82
DDX55-212ENST00000544738 C6orf226Q5I0X4 101 aa9.9□□□□□ -0.82
DDX55-212ENST00000544738 ZC2HC1BQ5TFG8 222 aa9.9□□□□□ -0.82
DDX55-212ENST00000544738 TIMM17AQ99595 171 aa9.9□□□□□ -0.82
DDX55-212ENST00000544738 IGLV7-43P04211 117 aa9.89□□□□□ -0.83
DDX55-212ENST00000544738 Q8IZM0 81 aa9.89□□□□□ -0.83
DDX55-212ENST00000544738 DIRC1Q969H9 104 aa9.89□□□□□ -0.83
DDX55-212ENST00000544738 TOMM6Q96B49 74 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms