RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 A0A0U1RQV1 116 aa9.38□□□□□ -0.91
PDZD4-209ENST00000544474 IGHV4-38-2P0DP08 117 aa9.38□□□□□ -0.91
PDZD4-209ENST00000544474 DEFB131AP59861 70 aa9.38□□□□□ -0.91
PDZD4-209ENST00000544474 IGHV1OR15-1A0A075B7D0 117 aa9.38□□□□□ -0.91
PDZD4-209ENST00000544474 USP17L23D6RBM5 183 aa9.37□□□□□ -0.91
PDZD4-209ENST00000544474 MIAQ16674 131 aa9.37□□□□□ -0.91
PDZD4-209ENST00000544474 USMG5Q96IX5 58 aa9.37□□□□□ -0.91
PDZD4-209ENST00000544474 LINC00467Q9BRT7 94 aa9.37□□□□□ -0.91
PDZD4-209ENST00000544474 XCL2Q9UBD3 114 aa9.37□□□□□ -0.91
PDZD4-209ENST00000544474 FAM236DA0A1B0GTK5 79 aa9.36□□□□□ -0.91
PDZD4-209ENST00000544474 FAM236CP0DP71 79 aa9.36□□□□□ -0.91
PDZD4-209ENST00000544474 APRG1Q8IVJ8 170 aa9.36□□□□□ -0.91
PDZD4-209ENST00000544474 TMEM243Q9BU79 118 aa9.36□□□□□ -0.91
PDZD4-209ENST00000544474 KIF25-AS1Q9Y6Z4 181 aa9.36□□□□□ -0.91
PDZD4-209ENST00000544474 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
PDZD4-209ENST00000544474 IGHV4-61A0A0C4DH41 118 aa9.36□□□□□ -0.91
PDZD4-209ENST00000544474 SOCS3O14543 225 aa9.36□□□□□ -0.91
PDZD4-209ENST00000544474 C9orf85Q96MD7 179 aa9.36□□□□□ -0.91
PDZD4-209ENST00000544474 PAX4O43316 350 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 TMEM86BQ8N661 226 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 LITAFQ99732 161 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 TRBV27A0A0K0K1C4 114 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 LMO4P61968 165 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 Q6ZSN1 163 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 COX7A2LO14548 114 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 NDUFC2O95298 119 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 COX6A2Q02221 97 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 FHL2Q14192 279 aa9.35□□□□□ -0.91
PDZD4-209ENST00000544474 NCR3O14931 201 aa9.34□□□□□ -0.91
PDZD4-209ENST00000544474 C19orf54Q5BKX5 351 aa9.34□□□□□ -0.91
PDZD4-209ENST00000544474 HIST2H2BCQ6DN03 193 aa9.34□□□□□ -0.91
PDZD4-209ENST00000544474 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
PDZD4-209ENST00000544474 GCN1Q92616 2671 aaKnown RBP9.34□□□□□ -0.91
PDZD4-209ENST00000544474 TRAV23DV6A0A075B6W5 121 aa9.34□□□□□ -0.91
PDZD4-209ENST00000544474 KLK9Q2XQG4 91 aa9.34□□□□□ -0.91
PDZD4-209ENST00000544474 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
PDZD4-209ENST00000544474 TRGV1A0A0A0MS02 117 aa9.33□□□□□ -0.92
PDZD4-209ENST00000544474 IGHV1-69P01742 117 aa9.33□□□□□ -0.92
PDZD4-209ENST00000544474 C1orf195Q5TG92 126 aa9.33□□□□□ -0.92
PDZD4-209ENST00000544474 PRORYQ9H606 182 aa9.33□□□□□ -0.92
PDZD4-209ENST00000544474 NBPF19A0A087WUL8 3843 aa9.33□□□□□ -0.92
PDZD4-209ENST00000544474 A0A1W2PRX2 142 aa9.33□□□□□ -0.92
PDZD4-209ENST00000544474 KLLNB2CW77 178 aa9.33□□□□□ -0.92
PDZD4-209ENST00000544474 NDUFC2-KCTD14E9PQ53 114 aa9.33□□□□□ -0.92
PDZD4-209ENST00000544474 TEP1Q99973 2627 aaKnown RBP9.32□□□□□ -0.92
PDZD4-209ENST00000544474 LINC00308Q8TCZ7 52 aa9.32□□□□□ -0.92
PDZD4-209ENST00000544474 FAM218AQ96MZ4 157 aa9.32□□□□□ -0.92
PDZD4-209ENST00000544474 IGHV4-30-2A0A087WSY4 118 aa9.31□□□□□ -0.92
PDZD4-209ENST00000544474 LECT2O14960 151 aa9.31□□□□□ -0.92
PDZD4-209ENST00000544474 UBR5O95071 2799 aaPredicted RBP9.31□□□□□ -0.92
PDZD4-209ENST00000544474 TRBV6-5A0A0K0K1A5 114 aa9.31□□□□□ -0.92
PDZD4-209ENST00000544474 Q6JHZ5 121 aa9.31□□□□□ -0.92
PDZD4-209ENST00000544474 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.31□□□□□ -0.92
PDZD4-209ENST00000544474 CRPP02741 224 aa9.31□□□□□ -0.92
PDZD4-209ENST00000544474 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
PDZD4-209ENST00000544474 HILS1P60008 231 aa9.3□□□□□ -0.92
PDZD4-209ENST00000544474 BRK1Q8WUW1 75 aa9.3□□□□□ -0.92
PDZD4-209ENST00000544474 RBMY1BA6NDE4 496 aaKnown RBP9.3□□□□□ -0.92
PDZD4-209ENST00000544474 RBMY1EA6NEQ0 496 aaKnown RBP9.3□□□□□ -0.92
PDZD4-209ENST00000544474 RBMY1DP0C7P1 496 aaKnown RBP9.3□□□□□ -0.92
PDZD4-209ENST00000544474 RBMY1A1P0DJD3 496 aaKnown RBP9.3□□□□□ -0.92
PDZD4-209ENST00000544474 RBMY1CP0DJD4 496 aa9.3□□□□□ -0.92
PDZD4-209ENST00000544474 RBMY1FQ15415 496 aaKnown RBP9.3□□□□□ -0.92
PDZD4-209ENST00000544474 C9orf129Q5T035 196 aaKnown RBP9.3□□□□□ -0.92
PDZD4-209ENST00000544474 LINC01561Q8N1V8 128 aa9.3□□□□□ -0.92
PDZD4-209ENST00000544474 C20orf197Q8N268 126 aa9.3□□□□□ -0.92
PDZD4-209ENST00000544474 CCL19Q99731 98 aa9.3□□□□□ -0.92
PDZD4-209ENST00000544474 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
PDZD4-209ENST00000544474 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
PDZD4-209ENST00000544474 A0A096LPF7 62 aa9.29□□□□□ -0.92
PDZD4-209ENST00000544474 GHRHP01286 108 aa9.29□□□□□ -0.92
PDZD4-209ENST00000544474 IGHG2P01859 326 aa9.29□□□□□ -0.92
PDZD4-209ENST00000544474 MIR7-3HGQ8N6C7 128 aa9.29□□□□□ -0.92
PDZD4-209ENST00000544474 UBE2L6O14933 153 aa9.28□□□□□ -0.92
PDZD4-209ENST00000544474 H3BUA1 57 aa9.28□□□□□ -0.92
PDZD4-209ENST00000544474 SOSTDC1Q6X4U4 206 aa9.28□□□□□ -0.92
PDZD4-209ENST00000544474 AVPP01185 164 aa9.27□□□□□ -0.92
PDZD4-209ENST00000544474 PSMB8P28062 276 aa9.27□□□□□ -0.92
PDZD4-209ENST00000544474 FAM222AQ5U5X8 452 aa9.27□□□□□ -0.93
PDZD4-209ENST00000544474 LINC00846Q9NV44 126 aa9.27□□□□□ -0.93
PDZD4-209ENST00000544474 PRR3P79522 188 aaKnown RBP9.26□□□□□ -0.93
PDZD4-209ENST00000544474 A0A087WYN8 130 aa9.26□□□□□ -0.93
PDZD4-209ENST00000544474 IGHV4-59P01825 116 aa9.26□□□□□ -0.93
PDZD4-209ENST00000544474 SMIM26A0A096LP01 95 aa9.25□□□□□ -0.93
PDZD4-209ENST00000544474 PRB2P02812 416 aaPredicted RBP9.25□□□□□ -0.93
PDZD4-209ENST00000544474 SLURP1P55000 103 aa9.25□□□□□ -0.93
PDZD4-209ENST00000544474 SND1-IT1Q9HBX3 110 aa9.25□□□□□ -0.93
PDZD4-209ENST00000544474 C18orf65Q6ZTR6 163 aa9.25□□□□□ -0.93
PDZD4-209ENST00000544474 DYNLRB2Q8TF09 96 aa9.25□□□□□ -0.93
PDZD4-209ENST00000544474 ATRQ13535 2644 aa9.24□□□□□ -0.93
PDZD4-209ENST00000544474 K7EMT4 169 aa9.24□□□□□ -0.93
PDZD4-209ENST00000544474 XCL1P47992 114 aa9.24□□□□□ -0.93
PDZD4-209ENST00000544474 HAMPP81172 84 aa9.24□□□□□ -0.93
PDZD4-209ENST00000544474 UBE2D4Q9Y2X8 147 aa9.24□□□□□ -0.93
PDZD4-209ENST00000544474 TRGV2A0A075B6R0 118 aa9.23□□□□□ -0.93
PDZD4-209ENST00000544474 PLA2G2AP14555 144 aa9.23□□□□□ -0.93
PDZD4-209ENST00000544474 BEAN1Q3B7T3 259 aa9.23□□□□□ -0.93
PDZD4-209ENST00000544474 C22orf24Q9Y442 160 aa9.23□□□□□ -0.93
PDZD4-209ENST00000544474 MRPS36P82909 103 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms