RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 SMIM2Q9BVW6 85 aa16.79■□□□□ 0.28
PDCD2-211ENST00000544336 NAT8Q9UHE5 227 aa16.79■□□□□ 0.28
PDCD2-211ENST00000544336 D6R8Y8 96 aa16.78■□□□□ 0.28
PDCD2-211ENST00000544336 RPL32P62910 135 aaKnown RBP16.78■□□□□ 0.28
PDCD2-211ENST00000544336 MRPL35Q9NZE8 188 aaKnown RBP16.78■□□□□ 0.28
PDCD2-211ENST00000544336 FAM168BA1KXE4 195 aa16.77■□□□□ 0.28
PDCD2-211ENST00000544336 IFITM10A6NMD0 228 aa16.77■□□□□ 0.28
PDCD2-211ENST00000544336 C9JQL5 133 aa16.77■□□□□ 0.28
PDCD2-211ENST00000544336 NDUFA1O15239 70 aa16.77■□□□□ 0.28
PDCD2-211ENST00000544336 TCAPO15273 167 aa16.77■□□□□ 0.28
PDCD2-211ENST00000544336 C10orf25Q5T742 122 aa16.77■□□□□ 0.28
PDCD2-211ENST00000544336 MRPL54Q6P161 138 aaKnown RBP16.77■□□□□ 0.28
PDCD2-211ENST00000544336 SPANXA1Q9NS26 97 aa16.77■□□□□ 0.28
PDCD2-211ENST00000544336 IGHV3OR16-9A0A0B4J2B5 98 aa16.76■□□□□ 0.27
PDCD2-211ENST00000544336 A0A1B0GW15 77 aa16.76■□□□□ 0.27
PDCD2-211ENST00000544336 IMMP2LQ96T52 175 aa16.76■□□□□ 0.27
PDCD2-211ENST00000544336 NPYP01303 97 aa16.75■□□□□ 0.27
PDCD2-211ENST00000544336 HBBP68871 147 aa16.75■□□□□ 0.27
PDCD2-211ENST00000544336 A0A087WZ39 114 aa16.74■□□□□ 0.27
PDCD2-211ENST00000544336 UNQ6190/PRO20217Q6UXQ8 127 aa16.74■□□□□ 0.27
PDCD2-211ENST00000544336 FAM19A5Q7Z5A7 132 aaPredicted RBP16.74■□□□□ 0.27
PDCD2-211ENST00000544336 F8WDY8 70 aa16.73■□□□□ 0.27
PDCD2-211ENST00000544336 IGLV7-43P04211 117 aa16.73■□□□□ 0.27
PDCD2-211ENST00000544336 MRPS36P82909 103 aaKnown RBP16.73■□□□□ 0.27
PDCD2-211ENST00000544336 SRSF3P84103 164 aaKnown RBP16.72■□□□□ 0.27
PDCD2-211ENST00000544336 GAGE2EQ4V326 116 aa16.72■□□□□ 0.27
PDCD2-211ENST00000544336 KRTAP11-1Q8IUC1 163 aa16.72■□□□□ 0.27
PDCD2-211ENST00000544336 PRR26Q8N8Z3 221 aa16.72■□□□□ 0.27
PDCD2-211ENST00000544336 C6orf48Q9UBA6 75 aa16.72■□□□□ 0.27
PDCD2-211ENST00000544336 GAGE2DQ9UEU5 116 aa16.72■□□□□ 0.27
PDCD2-211ENST00000544336 F8W036 122 aa16.71■□□□□ 0.27
PDCD2-211ENST00000544336 DIRC1Q969H9 104 aa16.71■□□□□ 0.27
PDCD2-211ENST00000544336 S100A8P05109 93 aa16.7■□□□□ 0.26
PDCD2-211ENST00000544336 TGIF2-C20orf24A0A0A6YYL0 155 aa16.69■□□□□ 0.26
PDCD2-211ENST00000544336 TLX1NBP0CAT3 122 aa16.68■□□□□ 0.26
PDCD2-211ENST00000544336 A0A1B0GXF2 115 aa16.67■□□□□ 0.26
PDCD2-211ENST00000544336 PEA15Q15121 130 aa16.67■□□□□ 0.26
PDCD2-211ENST00000544336 LPAP08519 4548 aa16.67■□□□□ 0.26
PDCD2-211ENST00000544336 IFI27P40305 119 aaPredicted RBP16.66■□□□□ 0.26
PDCD2-211ENST00000544336 SMDT1Q9H4I9 107 aa16.66■□□□□ 0.26
PDCD2-211ENST00000544336 H0Y9J4 135 aa16.65■□□□□ 0.26
PDCD2-211ENST00000544336 PPBPP02775 128 aa16.65■□□□□ 0.26
PDCD2-211ENST00000544336 RAB5AP20339 215 aa16.65■□□□□ 0.26
PDCD2-211ENST00000544336 KIAA0087Q14695 138 aa16.64■□□□□ 0.25
PDCD2-211ENST00000544336 LINC00242Q5T6M2 205 aa16.63■□□□□ 0.25
PDCD2-211ENST00000544336 C2orf82Q6UX34 121 aa16.63■□□□□ 0.25
PDCD2-211ENST00000544336 KRTAP7-1Q8IUC3 87 aa16.63■□□□□ 0.25
PDCD2-211ENST00000544336 ORMDL3Q8N138 153 aa16.63■□□□□ 0.25
PDCD2-211ENST00000544336 PRELID3AQ96N28 172 aa16.63■□□□□ 0.25
PDCD2-211ENST00000544336 IGLV4-3A0A075B6K6 122 aa16.62■□□□□ 0.25
PDCD2-211ENST00000544336 M0QXV9 152 aa16.62■□□□□ 0.25
PDCD2-211ENST00000544336 UBE2BP63146 152 aa16.62■□□□□ 0.25
PDCD2-211ENST00000544336 TMEM136Q6ZRR5 245 aa16.62■□□□□ 0.25
PDCD2-211ENST00000544336 TMEM141Q96I45 108 aa16.59■□□□□ 0.25
PDCD2-211ENST00000544336 PYGO1Q9Y3Y4 419 aa16.59■□□□□ 0.25
PDCD2-211ENST00000544336 LOC389332A0A1B0GUA5 103 aa16.58■□□□□ 0.24
PDCD2-211ENST00000544336 TRBV30A0A0K0K1B3 111 aa16.57■□□□□ 0.24
PDCD2-211ENST00000544336 PACRGQ96M98 296 aaPredicted RBP16.57■□□□□ 0.24
PDCD2-211ENST00000544336 C9orf129Q5T035 196 aaKnown RBP16.56■□□□□ 0.24
PDCD2-211ENST00000544336 ZC2HC1BQ5TFG8 222 aa16.56■□□□□ 0.24
PDCD2-211ENST00000544336 TEX43Q6ZNM6 134 aa16.56■□□□□ 0.24
PDCD2-211ENST00000544336 A0A1B0GVG6 124 aa16.55■□□□□ 0.24
PDCD2-211ENST00000544336 NDUFC2-KCTD14E9PQ53 114 aa16.55■□□□□ 0.24
PDCD2-211ENST00000544336 ATP5L2Q7Z4Y8 100 aa16.55■□□□□ 0.24
PDCD2-211ENST00000544336 IGLV1-50A0A075B6I6 118 aa16.54■□□□□ 0.24
PDCD2-211ENST00000544336 KRTAP1-4P0C5Y4 121 aa16.54■□□□□ 0.24
PDCD2-211ENST00000544336 UBE2D1P51668 147 aa16.54■□□□□ 0.24
PDCD2-211ENST00000544336 C2orf88Q9BSF0 95 aa16.53■□□□□ 0.24
PDCD2-211ENST00000544336 MAP1LC3AQ9H492 121 aa16.52■□□□□ 0.24
PDCD2-211ENST00000544336 TOMM7Q9P0U1 55 aa16.51■□□□□ 0.23
PDCD2-211ENST00000544336 C2orf66Q6UXQ4 117 aa16.5■□□□□ 0.23
PDCD2-211ENST00000544336 LINC00173Q6ZV60 143 aa16.5■□□□□ 0.23
PDCD2-211ENST00000544336 CYSLTR1Q9Y271 337 aa16.5■□□□□ 0.23
PDCD2-211ENST00000544336 PRSS47A8MTI9 375 aa16.49■□□□□ 0.23
PDCD2-211ENST00000544336 PRSS2P07478 247 aa16.49■□□□□ 0.23
PDCD2-211ENST00000544336 Q6ZN92 141 aa16.49■□□□□ 0.23
PDCD2-211ENST00000544336 LINC00469Q8N7U9 141 aa16.49■□□□□ 0.23
PDCD2-211ENST00000544336 LINC01561Q8N1V8 128 aa16.48■□□□□ 0.23
PDCD2-211ENST00000544336 CKS1BP61024 79 aa16.47■□□□□ 0.23
PDCD2-211ENST00000544336 Q8N8P6 123 aa16.47■□□□□ 0.23
PDCD2-211ENST00000544336 VCX2Q9H322 139 aa16.47■□□□□ 0.23
PDCD2-211ENST00000544336 LAMTOR2Q9Y2Q5 125 aa16.47■□□□□ 0.23
PDCD2-211ENST00000544336 AMELXQ99217 191 aa16.45■□□□□ 0.22
PDCD2-211ENST00000544336 PRR4Q16378 134 aa16.44■□□□□ 0.22
PDCD2-211ENST00000544336 C6orf226Q5I0X4 101 aa16.44■□□□□ 0.22
PDCD2-211ENST00000544336 RPL13AP40429 203 aaKnown RBP16.43■□□□□ 0.22
PDCD2-211ENST00000544336 XAGE1AQ9HD64 81 aa16.43■□□□□ 0.22
PDCD2-211ENST00000544336 ORMDL2Q53FV1 153 aa16.42■□□□□ 0.22
PDCD2-211ENST00000544336 ALKBH7Q9BT30 221 aaPredicted RBP16.42■□□□□ 0.22
PDCD2-211ENST00000544336 C22orf24Q9Y442 160 aa16.42■□□□□ 0.22
PDCD2-211ENST00000544336 ZNF861PO60384 105 aa16.4■□□□□ 0.22
PDCD2-211ENST00000544336 Q8IZM0 81 aa16.4■□□□□ 0.22
PDCD2-211ENST00000544336 IGIPA6NJ69 53 aa16.39■□□□□ 0.21
PDCD2-211ENST00000544336 MT-ND4LP03901 98 aa16.37■□□□□ 0.21
PDCD2-211ENST00000544336 CDKN2A-AS1Q9UH64 79 aa16.37■□□□□ 0.21
PDCD2-211ENST00000544336 NUPR1O60356 82 aa16.36■□□□□ 0.21
PDCD2-211ENST00000544336 FAM19A3Q7Z5A8 133 aa16.36■□□□□ 0.21
PDCD2-211ENST00000544336 ANAPC16Q96DE5 110 aa16.36■□□□□ 0.21
PDCD2-211ENST00000544336 CTDSP1Q9GZU7 261 aa16.36■□□□□ 0.21
PDCD2-211ENST00000544336 CARHSP1Q9Y2V2 147 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms