RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 IGLV4-69A0A075B6H9 119 aa14.76□□□□□ -0.05
CHFR-222ENST00000544093 IGKV2-24A0A0C4DH68 120 aa14.76□□□□□ -0.05
CHFR-222ENST00000544093 G0S2P27469 103 aa14.76□□□□□ -0.05
CHFR-222ENST00000544093 MAJINQ3KP22 176 aa14.76□□□□□ -0.05
CHFR-222ENST00000544093 C5orf38Q86SI9 138 aa14.76□□□□□ -0.05
CHFR-222ENST00000544093 OR10D4PQ8NGN7 298 aa14.76□□□□□ -0.05
CHFR-222ENST00000544093 C2orf48Q96LS8 159 aa14.76□□□□□ -0.05
CHFR-222ENST00000544093 OPRPNQ99935 248 aaPredicted RBP14.76□□□□□ -0.05
CHFR-222ENST00000544093 CYSLTR1Q9Y271 337 aa14.76□□□□□ -0.05
CHFR-222ENST00000544093 TMEM141Q96I45 108 aa14.75□□□□□ -0.05
CHFR-222ENST00000544093 IGHV3OR16-9A0A0B4J2B5 98 aa14.74□□□□□ -0.05
CHFR-222ENST00000544093 KRTAP29-1A8MX34 341 aaPredicted RBP14.74□□□□□ -0.05
CHFR-222ENST00000544093 J3QL48 77 aa14.74□□□□□ -0.05
CHFR-222ENST00000544093 NPSP0C0P6 89 aa14.74□□□□□ -0.05
CHFR-222ENST00000544093 C7orf33Q8WU49 177 aa14.74□□□□□ -0.05
CHFR-222ENST00000544093 CAMK2N2Q96S95 79 aa14.74□□□□□ -0.05
CHFR-222ENST00000544093 IGLV4-3A0A075B6K6 122 aa14.73□□□□□ -0.05
CHFR-222ENST00000544093 A0A096LNI7 61 aa14.73□□□□□ -0.05
CHFR-222ENST00000544093 F8WDY8 70 aa14.73□□□□□ -0.05
CHFR-222ENST00000544093 COX19Q49B96 90 aa14.73□□□□□ -0.05
CHFR-222ENST00000544093 C2orf66Q6UXQ4 117 aa14.73□□□□□ -0.05
CHFR-222ENST00000544093 TGIF2-C20orf24A0A0A6YYL0 155 aa14.72□□□□□ -0.05
CHFR-222ENST00000544093 SPAG11BQ08648 103 aa14.72□□□□□ -0.05
CHFR-222ENST00000544093 C10orf91Q5T1B1 145 aa14.72□□□□□ -0.05
CHFR-222ENST00000544093 Q6ZN92 141 aa14.72□□□□□ -0.05
CHFR-222ENST00000544093 TEX43Q6ZNM6 134 aa14.72□□□□□ -0.05
CHFR-222ENST00000544093 STPG4Q8N801 248 aa14.72□□□□□ -0.05
CHFR-222ENST00000544093 C2orf88Q9BSF0 95 aa14.72□□□□□ -0.05
CHFR-222ENST00000544093 RHEBQ15382 184 aa14.71□□□□□ -0.05
CHFR-222ENST00000544093 GNB1LQ9BYB4 327 aa14.71□□□□□ -0.05
CHFR-222ENST00000544093 LOC107984640A0A0U1RRK4 108 aa14.7□□□□□ -0.06
CHFR-222ENST00000544093 Q6ZRU5 148 aa14.7□□□□□ -0.06
CHFR-222ENST00000544093 CARHSP1Q9Y2V2 147 aaKnown RBP14.7□□□□□ -0.06
CHFR-222ENST00000544093 PAPPA-AS1Q5QFB9 102 aa14.69□□□□□ -0.06
CHFR-222ENST00000544093 HERC1Q15751 4861 aa14.68□□□□□ -0.06
CHFR-222ENST00000544093 OXTP01178 125 aa14.68□□□□□ -0.06
CHFR-222ENST00000544093 RNF151Q2KHN1 245 aa14.68□□□□□ -0.06
CHFR-222ENST00000544093 ORAOV1Q8WV07 137 aa14.68□□□□□ -0.06
CHFR-222ENST00000544093 MT-ND6P03923 174 aa14.67□□□□□ -0.06
CHFR-222ENST00000544093 PTTG1IPP53801 180 aa14.67□□□□□ -0.06
CHFR-222ENST00000544093 LINC00242Q5T6M2 205 aa14.67□□□□□ -0.06
CHFR-222ENST00000544093 VCX2Q9H322 139 aa14.67□□□□□ -0.06
CHFR-222ENST00000544093 A0A087WZ39 114 aa14.66□□□□□ -0.06
CHFR-222ENST00000544093 KIAA1644Q3SXP7 199 aa14.66□□□□□ -0.06
CHFR-222ENST00000544093 IGIPA6NJ69 53 aa14.65□□□□□ -0.06
CHFR-222ENST00000544093 AMELXQ99217 191 aa14.65□□□□□ -0.06
CHFR-222ENST00000544093 RPS10P5Q9NQ39 176 aa14.65□□□□□ -0.06
CHFR-222ENST00000544093 MRPL35Q9NZE8 188 aaKnown RBP14.65□□□□□ -0.06
CHFR-222ENST00000544093 LINC01549A6NIU2 74 aa14.64□□□□□ -0.07
CHFR-222ENST00000544093 NDUFA1O15239 70 aa14.64□□□□□ -0.07
CHFR-222ENST00000544093 UBE2D1P51668 147 aa14.64□□□□□ -0.07
CHFR-222ENST00000544093 LINC01561Q8N1V8 128 aa14.64□□□□□ -0.07
CHFR-222ENST00000544093 GAGE2BQ13066 116 aa14.63□□□□□ -0.07
CHFR-222ENST00000544093 TIMM17AQ99595 171 aa14.63□□□□□ -0.07
CHFR-222ENST00000544093 SEC11AP67812 179 aa14.62□□□□□ -0.07
CHFR-222ENST00000544093 TOMM6Q96B49 74 aa14.62□□□□□ -0.07
CHFR-222ENST00000544093 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.61□□□□□ -0.07
CHFR-222ENST00000544093 ALKBH7Q9BT30 221 aaPredicted RBP14.61□□□□□ -0.07
CHFR-222ENST00000544093 NDUFA5Q16718 116 aa14.6□□□□□ -0.07
CHFR-222ENST00000544093 LINC00173Q6ZV60 143 aa14.6□□□□□ -0.07
CHFR-222ENST00000544093 FAM19A3Q7Z5A8 133 aa14.6□□□□□ -0.07
CHFR-222ENST00000544093 HNRNPA3P51991 378 aaKnown RBP14.59□□□□□ -0.07
CHFR-222ENST00000544093 RPL18AQ02543 176 aaKnown RBP14.59□□□□□ -0.07
CHFR-222ENST00000544093 MRPL18Q9H0U6 180 aaKnown RBP14.59□□□□□ -0.07
CHFR-222ENST00000544093 LINC01546A6NGU7 62 aa14.58□□□□□ -0.08
CHFR-222ENST00000544093 ERASQ7Z444 233 aa14.58□□□□□ -0.08
CHFR-222ENST00000544093 HERVK_113P63121 156 aa14.57□□□□□ -0.08
CHFR-222ENST00000544093 FABP9Q0Z7S8 132 aa14.57□□□□□ -0.08
CHFR-222ENST00000544093 PKHD1L1Q86WI1 4243 aa14.56□□□□□ -0.08
CHFR-222ENST00000544093 TLX1NBP0CAT3 122 aa14.56□□□□□ -0.08
CHFR-222ENST00000544093 PRR3P79522 188 aaKnown RBP14.56□□□□□ -0.08
CHFR-222ENST00000544093 SVBPQ8N300 66 aa14.56□□□□□ -0.08
CHFR-222ENST00000544093 SCGB3A1Q96QR1 104 aa14.56□□□□□ -0.08
CHFR-222ENST00000544093 SNAPINO95295 136 aa14.55□□□□□ -0.08
CHFR-222ENST00000544093 KIAA0087Q14695 138 aa14.55□□□□□ -0.08
CHFR-222ENST00000544093 A0A0J9YXV3 536 aa14.54□□□□□ -0.08
CHFR-222ENST00000544093 TRBV30A0A0K0K1B3 111 aa14.54□□□□□ -0.08
CHFR-222ENST00000544093 APOC3P02656 99 aa14.54□□□□□ -0.08
CHFR-222ENST00000544093 ZC2HC1BQ5TFG8 222 aa14.54□□□□□ -0.08
CHFR-222ENST00000544093 UNQ6190/PRO20217Q6UXQ8 127 aa14.54□□□□□ -0.08
CHFR-222ENST00000544093 FA2HQ7L5A8 372 aa14.54□□□□□ -0.08
CHFR-222ENST00000544093 SMCO4Q9NRQ5 59 aa14.54□□□□□ -0.08
CHFR-222ENST00000544093 LRP1Q07954 4544 aaKnown RBP14.54□□□□□ -0.08
CHFR-222ENST00000544093 PRSS2P07478 247 aa14.53□□□□□ -0.08
CHFR-222ENST00000544093 GEMIN7Q9H840 131 aaKnown RBP14.53□□□□□ -0.08
CHFR-222ENST00000544093 C10orf25Q5T742 122 aa14.52□□□□□ -0.09
CHFR-222ENST00000544093 Q6ZRP5 223 aa14.52□□□□□ -0.09
CHFR-222ENST00000544093 PACRGQ96M98 296 aaPredicted RBP14.52□□□□□ -0.09
CHFR-222ENST00000544093 C6orf48Q9UBA6 75 aa14.52□□□□□ -0.09
CHFR-222ENST00000544093 C9orf116Q5BN46 136 aaPredicted RBP14.51□□□□□ -0.09
CHFR-222ENST00000544093 TRAPPC1Q9Y5R8 145 aa14.5□□□□□ -0.09
CHFR-222ENST00000544093 A0A1W2PNN7 141 aa14.49□□□□□ -0.09
CHFR-222ENST00000544093 CKS1BP61024 79 aa14.49□□□□□ -0.09
CHFR-222ENST00000544093 Q8IZM0 81 aa14.49□□□□□ -0.09
CHFR-222ENST00000544093 FAT3Q8TDW7 4589 aa14.49□□□□□ -0.09
CHFR-222ENST00000544093 C6orf226Q5I0X4 101 aa14.48□□□□□ -0.09
CHFR-222ENST00000544093 C2orf82Q6UX34 121 aa14.47□□□□□ -0.09
CHFR-222ENST00000544093 CDKN2A-AS1Q9UH64 79 aa14.47□□□□□ -0.09
CHFR-222ENST00000544093 TINCRA0A1B0GVN0 87 aa14.46□□□□□ -0.09
CHFR-222ENST00000544093 NDUFC2-KCTD14E9PQ53 114 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms