RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 RPS10P5Q9NQ39 176 aa7.46□□□□□ -1.22
GABPB1-206ENST00000543881 IGKV2-24A0A0C4DH68 120 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 PHOX2AO14813 284 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 NPSP0C0P6 89 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 TMEM241Q24JQ0 296 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 ZNF664Q8N3J9 261 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 NUP35Q8NFH5 326 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 MRAP2Q96G30 205 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 TMEM101Q96IK0 257 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 BTF3L4Q96K17 158 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 CDC42SE2Q9NRR3 84 aa7.45□□□□□ -1.22
GABPB1-206ENST00000543881 A0A096LNI7 61 aa7.44□□□□□ -1.22
GABPB1-206ENST00000543881 C9JQL5 133 aa7.44□□□□□ -1.22
GABPB1-206ENST00000543881 SRSF3P84103 164 aaKnown RBP7.44□□□□□ -1.22
GABPB1-206ENST00000543881 NRACQ8N912 160 aa7.44□□□□□ -1.22
GABPB1-206ENST00000543881 ISOC2Q96AB3 205 aa7.44□□□□□ -1.22
GABPB1-206ENST00000543881 LINC01600Q96MT4 127 aa7.44□□□□□ -1.22
GABPB1-206ENST00000543881 RPL23P62829 140 aaKnown RBP7.43□□□□□ -1.22
GABPB1-206ENST00000543881 PRO1933Q9H354 126 aa7.43□□□□□ -1.22
GABPB1-206ENST00000543881 IGHV1-58A0A0C4DH39 117 aa7.43□□□□□ -1.22
GABPB1-206ENST00000543881 NDUFA6P56556 154 aa7.43□□□□□ -1.22
GABPB1-206ENST00000543881 RIGQ13278 110 aa7.43□□□□□ -1.22
GABPB1-206ENST00000543881 STPG4Q8N801 248 aa7.43□□□□□ -1.22
GABPB1-206ENST00000543881 PACRGQ96M98 296 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-206ENST00000543881 VCYO14598 125 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BKO60814 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BJP06899 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BOP23527 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BBP33778 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BDP58876 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BCP62807 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 SS18Q15532 418 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST2H2BEQ16778 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.42□□□□□ -1.22
GABPB1-206ENST00000543881 CD164L2Q6UWJ8 174 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BHQ93079 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BNQ99877 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BMQ99879 126 aa7.42□□□□□ -1.22
GABPB1-206ENST00000543881 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
GABPB1-206ENST00000543881 MRPL51Q4U2R6 128 aaKnown RBP7.41□□□□□ -1.22
GABPB1-206ENST00000543881 RNASE13Q5GAN3 156 aaKnown RBP7.41□□□□□ -1.22
GABPB1-206ENST00000543881 C7orf33Q8WU49 177 aa7.41□□□□□ -1.22
GABPB1-206ENST00000543881 ORAOV1Q8WV07 137 aa7.41□□□□□ -1.22
GABPB1-206ENST00000543881 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
GABPB1-206ENST00000543881 HIST1H2BLQ99880 126 aa7.41□□□□□ -1.22
GABPB1-206ENST00000543881 NAT8BQ9UHF3 227 aa7.41□□□□□ -1.22
GABPB1-206ENST00000543881 UBE2D4Q9Y2X8 147 aa7.41□□□□□ -1.22
GABPB1-206ENST00000543881 SMIM27A0A1W2PRY6 76 aa7.4□□□□□ -1.22
GABPB1-206ENST00000543881 TMEM238C9JI98 176 aa7.4□□□□□ -1.22
GABPB1-206ENST00000543881 FCER1GP30273 86 aa7.4□□□□□ -1.22
GABPB1-206ENST00000543881 SMCPP49901 116 aaPredicted RBP7.4□□□□□ -1.22
GABPB1-206ENST00000543881 ADIRFQ15847 76 aa7.4□□□□□ -1.22
GABPB1-206ENST00000543881 FAM104BQ5XKR9 115 aa7.4□□□□□ -1.22
GABPB1-206ENST00000543881 CSDC2Q9Y534 153 aaKnown RBP7.4□□□□□ -1.22
GABPB1-206ENST00000543881 PRR3P79522 188 aaKnown RBP7.39□□□□□ -1.23
GABPB1-206ENST00000543881 SYCNQ0VAF6 134 aa7.39□□□□□ -1.23
GABPB1-206ENST00000543881 A0A0J9YXV3 536 aa7.38□□□□□ -1.23
GABPB1-206ENST00000543881 PPP1R17O96001 155 aa7.38□□□□□ -1.23
GABPB1-206ENST00000543881 CAMPP49913 170 aa7.38□□□□□ -1.23
GABPB1-206ENST00000543881 COL5A1-AS1Q5SY13 56 aa7.38□□□□□ -1.23
GABPB1-206ENST00000543881 Q6ZUT4 128 aa7.38□□□□□ -1.23
GABPB1-206ENST00000543881 KIR2DL4Q99706 377 aa7.38□□□□□ -1.23
GABPB1-206ENST00000543881 NAT8Q9UHE5 227 aa7.38□□□□□ -1.23
GABPB1-206ENST00000543881 IGLV4-69A0A075B6H9 119 aa7.37□□□□□ -1.23
GABPB1-206ENST00000543881 ZNF561-AS1K7EIQ3 104 aa7.37□□□□□ -1.23
GABPB1-206ENST00000543881 FABP4P15090 132 aa7.37□□□□□ -1.23
GABPB1-206ENST00000543881 KRTAP10-8P60410 259 aa7.37□□□□□ -1.23
GABPB1-206ENST00000543881 FAM104AQ969W3 186 aa7.37□□□□□ -1.23
GABPB1-206ENST00000543881 LINC00474Q9P2X8 69 aa7.37□□□□□ -1.23
GABPB1-206ENST00000543881 TRBV24-1A0A075B6N3 115 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 TRAV13-1A0A0B4J241 112 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 COX7A2LO14548 114 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 C20orf202A1L168 122 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 MALP21145 153 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 CKS2P33552 79 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 PTTG1IPP53801 180 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
GABPB1-206ENST00000543881 C5orf38Q86SI9 138 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 C20orf78Q9BR46 151 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 TIMM21Q9BVV7 248 aa7.36□□□□□ -1.23
GABPB1-206ENST00000543881 A0A1B0GXF2 115 aa7.35□□□□□ -1.23
GABPB1-206ENST00000543881 TNFRSF6BO95407 300 aa7.35□□□□□ -1.23
GABPB1-206ENST00000543881 RPL32P62910 135 aaKnown RBP7.35□□□□□ -1.23
GABPB1-206ENST00000543881 MRPL54Q6P161 138 aaKnown RBP7.35□□□□□ -1.23
GABPB1-206ENST00000543881 MIEN1Q9BRT3 115 aa7.35□□□□□ -1.23
GABPB1-206ENST00000543881 PKIGQ9Y2B9 76 aa7.35□□□□□ -1.23
GABPB1-206ENST00000543881 LOC107984640A0A0U1RRK4 108 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 A0A1B0GW15 77 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 A0A1W2PNN7 141 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 D6R8Y8 96 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 NPYP01303 97 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 SMAGPQ0VAQ4 97 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 GAGE2BQ13066 116 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 IMMP2LQ96T52 175 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 OPRPNQ99935 248 aaPredicted RBP7.34□□□□□ -1.23
GABPB1-206ENST00000543881 SMIM2Q9BVW6 85 aa7.34□□□□□ -1.23
GABPB1-206ENST00000543881 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.33□□□□□ -1.24
GABPB1-206ENST00000543881 SCGB1A1P11684 91 aa7.33□□□□□ -1.24
GABPB1-206ENST00000543881 HBBP68871 147 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms