RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 LOC389332A0A1B0GUA5 103 aa9.02□□□□□ -0.97
VPS37B-204ENST00000543590 APOC3P02656 99 aa9.02□□□□□ -0.97
VPS37B-204ENST00000543590 ADCYAP1P18509 176 aa9.02□□□□□ -0.97
VPS37B-204ENST00000543590 SVBPQ8N300 66 aa9.02□□□□□ -0.97
VPS37B-204ENST00000543590 PKIGQ9Y2B9 76 aa9.02□□□□□ -0.97
VPS37B-204ENST00000543590 STPG4Q8N801 248 aa9.01□□□□□ -0.97
VPS37B-204ENST00000543590 SEC11CQ9BY50 192 aa9.01□□□□□ -0.97
VPS37B-204ENST00000543590 MAP1LC3AQ9H492 121 aa9.01□□□□□ -0.97
VPS37B-204ENST00000543590 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
VPS37B-204ENST00000543590 IFITM10A6NMD0 228 aa9□□□□□ -0.97
VPS37B-204ENST00000543590 APOMO95445 188 aa9□□□□□ -0.97
VPS37B-204ENST00000543590 OXTP01178 125 aa9□□□□□ -0.97
VPS37B-204ENST00000543590 Q6ZRU5 148 aa9□□□□□ -0.97
VPS37B-204ENST00000543590 IMMP2LQ96T52 175 aa9□□□□□ -0.97
VPS37B-204ENST00000543590 PYGO1Q9Y3Y4 419 aa9□□□□□ -0.97
VPS37B-204ENST00000543590 IFI27P40305 119 aaPredicted RBP8.99□□□□□ -0.97
VPS37B-204ENST00000543590 Q8N8P6 123 aa8.99□□□□□ -0.97
VPS37B-204ENST00000543590 C7orf33Q8WU49 177 aa8.99□□□□□ -0.97
VPS37B-204ENST00000543590 CAMK2N2Q96S95 79 aa8.99□□□□□ -0.97
VPS37B-204ENST00000543590 IGHV3OR16-9A0A0B4J2B5 98 aa8.98□□□□□ -0.97
VPS37B-204ENST00000543590 C2orf48Q96LS8 159 aa8.98□□□□□ -0.97
VPS37B-204ENST00000543590 CTDSP1Q9GZU7 261 aa8.98□□□□□ -0.97
VPS37B-204ENST00000543590 IGLV4-3A0A075B6K6 122 aa8.97□□□□□ -0.97
VPS37B-204ENST00000543590 LOC107984640A0A0U1RRK4 108 aa8.97□□□□□ -0.97
VPS37B-204ENST00000543590 SNAPINO95295 136 aa8.97□□□□□ -0.97
VPS37B-204ENST00000543590 SPAG11BQ08648 103 aa8.97□□□□□ -0.97
VPS37B-204ENST00000543590 OR10D4PQ8NGN7 298 aa8.97□□□□□ -0.97
VPS37B-204ENST00000543590 HERC1Q15751 4861 aa8.97□□□□□ -0.97
VPS37B-204ENST00000543590 PTTG1IPP53801 180 aa8.96□□□□□ -0.97
VPS37B-204ENST00000543590 GAGE2BQ13066 116 aa8.96□□□□□ -0.98
VPS37B-204ENST00000543590 C2orf66Q6UXQ4 117 aa8.96□□□□□ -0.98
VPS37B-204ENST00000543590 ORAOV1Q8WV07 137 aa8.96□□□□□ -0.98
VPS37B-204ENST00000543590 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
VPS37B-204ENST00000543590 CYSLTR1Q9Y271 337 aa8.96□□□□□ -0.98
VPS37B-204ENST00000543590 TRAV9-1A0A075B6T8 112 aa8.95□□□□□ -0.98
VPS37B-204ENST00000543590 K7EMI3 77 aa8.95□□□□□ -0.98
VPS37B-204ENST00000543590 ORMDL2Q53FV1 153 aa8.95□□□□□ -0.98
VPS37B-204ENST00000543590 LINC00242Q5T6M2 205 aa8.95□□□□□ -0.98
VPS37B-204ENST00000543590 TGIF2-C20orf24A0A0A6YYL0 155 aa8.94□□□□□ -0.98
VPS37B-204ENST00000543590 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.94□□□□□ -0.98
VPS37B-204ENST00000543590 RNF151Q2KHN1 245 aa8.94□□□□□ -0.98
VPS37B-204ENST00000543590 KIAA1644Q3SXP7 199 aa8.94□□□□□ -0.98
VPS37B-204ENST00000543590 NXT2Q9NPJ8 142 aaKnown RBP8.94□□□□□ -0.98
VPS37B-204ENST00000543590 A0A087WZ39 114 aa8.93□□□□□ -0.98
VPS37B-204ENST00000543590 A0A0J9YXV3 536 aa8.93□□□□□ -0.98
VPS37B-204ENST00000543590 F8WDY8 70 aa8.93□□□□□ -0.98
VPS37B-204ENST00000543590 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
VPS37B-204ENST00000543590 UBE2D1P51668 147 aa8.92□□□□□ -0.98
VPS37B-204ENST00000543590 PRR3P79522 188 aaKnown RBP8.92□□□□□ -0.98
VPS37B-204ENST00000543590 ZC2HC1BQ5TFG8 222 aa8.92□□□□□ -0.98
VPS37B-204ENST00000543590 Q6ZN92 141 aa8.92□□□□□ -0.98
VPS37B-204ENST00000543590 LINC00173Q6ZV60 143 aa8.92□□□□□ -0.98
VPS37B-204ENST00000543590 MRPL35Q9NZE8 188 aaKnown RBP8.92□□□□□ -0.98
VPS37B-204ENST00000543590 IGIPA6NJ69 53 aa8.91□□□□□ -0.98
VPS37B-204ENST00000543590 S100PP25815 95 aa8.91□□□□□ -0.98
VPS37B-204ENST00000543590 RPL18AQ02543 176 aaKnown RBP8.91□□□□□ -0.98
VPS37B-204ENST00000543590 AMELXQ99217 191 aa8.91□□□□□ -0.98
VPS37B-204ENST00000543590 C2orf88Q9BSF0 95 aa8.91□□□□□ -0.98
VPS37B-204ENST00000543590 VCX2Q9H322 139 aa8.91□□□□□ -0.98
VPS37B-204ENST00000543590 A0A1W2PNN7 141 aa8.9□□□□□ -0.98
VPS37B-204ENST00000543590 NDUFA1O15239 70 aa8.9□□□□□ -0.98
VPS37B-204ENST00000543590 NPSP0C0P6 89 aa8.9□□□□□ -0.98
VPS37B-204ENST00000543590 C10orf25Q5T742 122 aa8.9□□□□□ -0.98
VPS37B-204ENST00000543590 UNQ6190/PRO20217Q6UXQ8 127 aa8.9□□□□□ -0.98
VPS37B-204ENST00000543590 LRP1Q07954 4544 aaKnown RBP8.89□□□□□ -0.99
VPS37B-204ENST00000543590 G0S2P27469 103 aa8.89□□□□□ -0.99
VPS37B-204ENST00000543590 KIAA0087Q14695 138 aa8.89□□□□□ -0.99
VPS37B-204ENST00000543590 C9orf116Q5BN46 136 aaPredicted RBP8.89□□□□□ -0.99
VPS37B-204ENST00000543590 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
VPS37B-204ENST00000543590 SMCO4Q9NRQ5 59 aa8.89□□□□□ -0.99
VPS37B-204ENST00000543590 MT1HL1P0DM35 61 aa8.88□□□□□ -0.99
VPS37B-204ENST00000543590 LINC01561Q8N1V8 128 aa8.88□□□□□ -0.99
VPS37B-204ENST00000543590 TOMM6Q96B49 74 aa8.88□□□□□ -0.99
VPS37B-204ENST00000543590 C6orf48Q9UBA6 75 aa8.88□□□□□ -0.99
VPS37B-204ENST00000543590 RHEBQ15382 184 aa8.87□□□□□ -0.99
VPS37B-204ENST00000543590 COX19Q49B96 90 aa8.87□□□□□ -0.99
VPS37B-204ENST00000543590 PAPPA-AS1Q5QFB9 102 aa8.87□□□□□ -0.99
VPS37B-204ENST00000543590 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
VPS37B-204ENST00000543590 Q6ZRP5 223 aa8.87□□□□□ -0.99
VPS37B-204ENST00000543590 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
VPS37B-204ENST00000543590 ALKBH7Q9BT30 221 aaPredicted RBP8.87□□□□□ -0.99
VPS37B-204ENST00000543590 TLX1NBP0CAT3 122 aa8.86□□□□□ -0.99
VPS37B-204ENST00000543590 C2orf82Q6UX34 121 aa8.86□□□□□ -0.99
VPS37B-204ENST00000543590 FAM19A3Q7Z5A8 133 aa8.86□□□□□ -0.99
VPS37B-204ENST00000543590 RPS10P5Q9NQ39 176 aa8.86□□□□□ -0.99
VPS37B-204ENST00000543590 PKHD1L1Q86WI1 4243 aa8.86□□□□□ -0.99
VPS37B-204ENST00000543590 ERASQ7Z444 233 aa8.85□□□□□ -0.99
VPS37B-204ENST00000543590 LINC01546A6NGU7 62 aa8.84□□□□□ -0.99
VPS37B-204ENST00000543590 MT-ND6P03923 174 aa8.84□□□□□ -0.99
VPS37B-204ENST00000543590 CBLN2Q8IUK8 224 aa8.84□□□□□ -0.99
VPS37B-204ENST00000543590 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
VPS37B-204ENST00000543590 MRPL18Q9H0U6 180 aaKnown RBP8.84□□□□□ -0.99
VPS37B-204ENST00000543590 TRBV30A0A0K0K1B3 111 aa8.83□□□□□ -1
VPS37B-204ENST00000543590 COLCA2A8K830 154 aa8.83□□□□□ -1
VPS37B-204ENST00000543590 HERVK_113P63121 156 aa8.83□□□□□ -1
VPS37B-204ENST00000543590 SEC11AP67812 179 aa8.83□□□□□ -1
VPS37B-204ENST00000543590 FABP9Q0Z7S8 132 aa8.83□□□□□ -1
VPS37B-204ENST00000543590 SRSF9Q13242 221 aaKnown RBP eCLIP8.83□□□□□ -1
VPS37B-204ENST00000543590 SPINK6Q6UWN8 80 aa8.83□□□□□ -1
VPS37B-204ENST00000543590 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms