RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 PPP3R2Q96LZ3 170 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 LINC01558Q9Y6Z2 57 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 USP9YO00507 2555 aaPredicted RBP-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 USP9XQ93008 2570 aaPredicted RBP-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 IQSEC2Q5JU85 1478 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 PAPPAQ13219 1627 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 KIF21AQ7Z4S6 1674 aa-0.5□□□□□ -2.49
KNTC1-213ENST00000542727 HMGN4O00479 90 aa-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 CEP152O94986 1710 aa-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 PKHD1P08F94 4074 aa-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 Q8N8P6 123 aa-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 TMEM263Q8WUH6 116 aaKnown RBP-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 RERGLQ9H628 205 aa-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 UQCR10Q9UDW1 63 aa-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 PAIP2BQ9ULR5 123 aaKnown RBP-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 SERP1Q9Y6X1 66 aa-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 PRKDCP78527 4128 aaKnown RBP-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 LAMA2P24043 3122 aaKnown RBP-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 HECTD1Q9ULT8 2610 aa-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 MYO18BQ8IUG5 2567 aa-0.51□□□□□ -2.49
KNTC1-213ENST00000542727 COL6A5A8TX70 2615 aa-0.52□□□□□ -2.49
KNTC1-213ENST00000542727 SPRR2AP35326 72 aa-0.52□□□□□ -2.49
KNTC1-213ENST00000542727 KLK9Q2XQG4 91 aa-0.52□□□□□ -2.49
KNTC1-213ENST00000542727 MYOZ3Q8TDC0 251 aa-0.52□□□□□ -2.49
KNTC1-213ENST00000542727 NAA60Q9H7X0 242 aa-0.52□□□□□ -2.49
KNTC1-213ENST00000542727 CHD8Q9HCK8 2581 aa-0.52□□□□□ -2.49
KNTC1-213ENST00000542727 SETBP1Q9Y6X0 1596 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 ARHGEF12Q9NZN5 1544 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 CFTRP13569 1480 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 MYOM3Q5VTT5 1437 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 NSD3Q9BZ95 1437 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 MIF4GDA9UHW6 222 aaKnown RBP-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 CHKB-CPT1BH3BT56 60 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 DEFB135Q30KP9 77 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 C10orf113Q5VZT2 155 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 C8orf59Q8N0T1 100 aaPredicted RBP-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 TSLPQ969D9 159 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 SNRNP25Q9BV90 132 aaKnown RBP-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 PRO1933Q9H354 126 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 NXT2Q9NPJ8 142 aaKnown RBP-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 SPTA1P02549 2419 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 FLGP20930 4061 aaPredicted RBP-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 ATRQ13535 2644 aa-0.53□□□□□ -2.49
KNTC1-213ENST00000542727 GRIN2AQ12879 1464 aa-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 CNOT1A5YKK6 2376 aaKnown RBP-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 NAIPQ13075 1403 aa-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 SSSCA1O60232 199 aa-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 IGLC1P0CG04 106 aa-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 Q56UQ5 140 aa-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 MEIG1Q5JSS6 88 aa-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 ARL11Q969Q4 196 aa-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 APLNQ9ULZ1 77 aa-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 FASNP49327 2511 aaKnown RBP-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 GVINP1Q7Z2Y8 2422 aa-0.54□□□□□ -2.5
KNTC1-213ENST00000542727 NBEAL2Q6ZNJ1 2754 aa-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 LINC00959A0A1B0GUT2 108 aa-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 CPSF4LA6NMK7 179 aaKnown RBP-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 APOC2P02655 101 aa-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 SELENOWP63302 87 aa-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 LSM10Q969L4 123 aaKnown RBP-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 SPANXDQ9BXN6 97 aa-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 ARL2-SNX15V9GYD0 113 aa-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 BICRAQ9NZM4 1560 aa-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 SVEP1Q4LDE5 3571 aa-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 WDR87Q6ZQQ6 2873 aa-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 CPSF1Q10570 1443 aaKnown RBP-0.55□□□□□ -2.5
KNTC1-213ENST00000542727 AKAP13Q12802 2813 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 COL12A1Q99715 3063 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 CELSR3Q9NYQ7 3312 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 CATR1Q13166 79 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 COMMD6Q7Z4G1 85 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 C5orf38Q86SI9 138 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 FAM167A-AS1Q96KT0 104 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 LINC01600Q96MT4 127 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 CCDC141Q6ZP82 1450 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 MXRA5Q9NR99 2828 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 RAPGEF6Q8TEU7 1601 aa-0.56□□□□□ -2.5
KNTC1-213ENST00000542727 URB1O60287 2271 aaKnown RBP-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 TULP4Q9NRJ4 1543 aa-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 UNC13AQ9UPW8 1703 aa-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 A0A1B0GWA3 101 aa-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 TRAPPC2P0DI81 140 aa-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 TRAPPC2BP0DI82 140 aa-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 KRTAP6-2Q3LI66 62 aa-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 FAM223AQ8IWN6 122 aa-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 RIMS1Q86UR5 1692 aaKnown RBP-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 FOCADQ5VW36 1801 aa-0.57□□□□□ -2.5
KNTC1-213ENST00000542727 MUC17Q685J3 4493 aa-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 PHLPP1O60346 1717 aa-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 MAGI1Q96QZ7 1491 aaPredicted RBP-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 F6UZH7 168 aa-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 SEC11AP67812 179 aa-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 C9orf153Q5TBE3 101 aa-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 SPRR4Q96PI1 79 aa-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 LINC00470Q9BZP3 86 aa-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 MANBALQ9NQG1 85 aa-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 CRIPTQ9P021 101 aa-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 PLECQ15149 4684 aaKnown RBP-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 KTN1Q86UP2 1357 aaKnown RBP-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms