RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 PYGO1Q9Y3Y4 419 aa12.11□□□□□ -0.47
RAB35-204ENST00000540803 IFITM10A6NMD0 228 aa12.1□□□□□ -0.47
RAB35-204ENST00000540803 KRTAP29-1A8MX34 341 aaPredicted RBP12.1□□□□□ -0.47
RAB35-204ENST00000540803 IGLV4-3A0A075B6K6 122 aa12.09□□□□□ -0.47
RAB35-204ENST00000540803 IGHV3OR16-9A0A0B4J2B5 98 aa12.09□□□□□ -0.47
RAB35-204ENST00000540803 HNRNPA3P51991 378 aaKnown RBP12.09□□□□□ -0.47
RAB35-204ENST00000540803 Q6ZRU5 148 aa12.09□□□□□ -0.47
RAB35-204ENST00000540803 TRAV9-1A0A075B6T8 112 aa12.08□□□□□ -0.48
RAB35-204ENST00000540803 J3QL48 77 aa12.08□□□□□ -0.48
RAB35-204ENST00000540803 APOMO95445 188 aa12.08□□□□□ -0.48
RAB35-204ENST00000540803 PKIGQ9Y2B9 76 aa12.08□□□□□ -0.48
RAB35-204ENST00000540803 STPG4Q8N801 248 aa12.07□□□□□ -0.48
RAB35-204ENST00000540803 C2orf48Q96LS8 159 aa12.07□□□□□ -0.48
RAB35-204ENST00000540803 SPAG11BQ08648 103 aa12.06□□□□□ -0.48
RAB35-204ENST00000540803 C10orf91Q5T1B1 145 aa12.06□□□□□ -0.48
RAB35-204ENST00000540803 C2orf66Q6UXQ4 117 aa12.06□□□□□ -0.48
RAB35-204ENST00000540803 TMEM141Q96I45 108 aa12.06□□□□□ -0.48
RAB35-204ENST00000540803 CAMK2N2Q96S95 79 aa12.06□□□□□ -0.48
RAB35-204ENST00000540803 LINC00474Q9P2X8 69 aa12.06□□□□□ -0.48
RAB35-204ENST00000540803 K7EMI3 77 aa12.05□□□□□ -0.48
RAB35-204ENST00000540803 KIAA1644Q3SXP7 199 aa12.05□□□□□ -0.48
RAB35-204ENST00000540803 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
RAB35-204ENST00000540803 OR10D4PQ8NGN7 298 aa12.05□□□□□ -0.48
RAB35-204ENST00000540803 NXT2Q9NPJ8 142 aaKnown RBP12.05□□□□□ -0.48
RAB35-204ENST00000540803 CYSLTR1Q9Y271 337 aa12.05□□□□□ -0.48
RAB35-204ENST00000540803 ORAOV1Q8WV07 137 aa12.04□□□□□ -0.48
RAB35-204ENST00000540803 S100PP25815 95 aa12.03□□□□□ -0.48
RAB35-204ENST00000540803 LINC00242Q5T6M2 205 aa12.03□□□□□ -0.48
RAB35-204ENST00000540803 TEX43Q6ZNM6 134 aa12.03□□□□□ -0.48
RAB35-204ENST00000540803 CARHSP1Q9Y2V2 147 aaKnown RBP12.03□□□□□ -0.48
RAB35-204ENST00000540803 LOC107984640A0A0U1RRK4 108 aa12.02□□□□□ -0.49
RAB35-204ENST00000540803 PTTG1IPP53801 180 aa12.02□□□□□ -0.49
RAB35-204ENST00000540803 ZC2HC1BQ5TFG8 222 aa12.02□□□□□ -0.49
RAB35-204ENST00000540803 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.49
RAB35-204ENST00000540803 C7orf33Q8WU49 177 aa12.02□□□□□ -0.49
RAB35-204ENST00000540803 TGIF2-C20orf24A0A0A6YYL0 155 aa12.01□□□□□ -0.49
RAB35-204ENST00000540803 IGIPA6NJ69 53 aa12.01□□□□□ -0.49
RAB35-204ENST00000540803 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.01□□□□□ -0.49
RAB35-204ENST00000540803 OXTP01178 125 aa12.01□□□□□ -0.49
RAB35-204ENST00000540803 UBE2D1P51668 147 aa12.01□□□□□ -0.49
RAB35-204ENST00000540803 GAGE2BQ13066 116 aa12.01□□□□□ -0.49
RAB35-204ENST00000540803 AMELXQ99217 191 aa12.01□□□□□ -0.49
RAB35-204ENST00000540803 GNB1LQ9BYB4 327 aa12.01□□□□□ -0.49
RAB35-204ENST00000540803 A0A087WZ39 114 aa12□□□□□ -0.49
RAB35-204ENST00000540803 RHEBQ15382 184 aa12□□□□□ -0.49
RAB35-204ENST00000540803 C2orf88Q9BSF0 95 aa12□□□□□ -0.49
RAB35-204ENST00000540803 A0A0J9YXV3 536 aa11.99□□□□□ -0.49
RAB35-204ENST00000540803 NPSP0C0P6 89 aa11.99□□□□□ -0.49
RAB35-204ENST00000540803 RNF151Q2KHN1 245 aa11.99□□□□□ -0.49
RAB35-204ENST00000540803 Q6ZN92 141 aa11.99□□□□□ -0.49
RAB35-204ENST00000540803 MRPL35Q9NZE8 188 aaKnown RBP11.99□□□□□ -0.49
RAB35-204ENST00000540803 F8WDY8 70 aa11.98□□□□□ -0.49
RAB35-204ENST00000540803 VCX2Q9H322 139 aa11.98□□□□□ -0.49
RAB35-204ENST00000540803 RPS10P5Q9NQ39 176 aa11.98□□□□□ -0.49
RAB35-204ENST00000540803 KIAA0087Q14695 138 aa11.97□□□□□ -0.49
RAB35-204ENST00000540803 C10orf25Q5T742 122 aa11.97□□□□□ -0.49
RAB35-204ENST00000540803 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
RAB35-204ENST00000540803 ALKBH7Q9BT30 221 aaPredicted RBP11.97□□□□□ -0.49
RAB35-204ENST00000540803 NDUFA1O15239 70 aa11.96□□□□□ -0.49
RAB35-204ENST00000540803 G0S2P27469 103 aa11.96□□□□□ -0.49
RAB35-204ENST00000540803 RPL18AQ02543 176 aaKnown RBP11.96□□□□□ -0.49
RAB35-204ENST00000540803 COX19Q49B96 90 aa11.96□□□□□ -0.49
RAB35-204ENST00000540803 A0A1W2PNN7 141 aa11.95□□□□□ -0.5
RAB35-204ENST00000540803 PRR3P79522 188 aaKnown RBP11.95□□□□□ -0.5
RAB35-204ENST00000540803 UNQ6190/PRO20217Q6UXQ8 127 aa11.95□□□□□ -0.5
RAB35-204ENST00000540803 FAM19A3Q7Z5A8 133 aa11.95□□□□□ -0.5
RAB35-204ENST00000540803 TIMM17AQ99595 171 aa11.95□□□□□ -0.5
RAB35-204ENST00000540803 MRPL18Q9H0U6 180 aaKnown RBP11.95□□□□□ -0.5
RAB35-204ENST00000540803 LINC01546A6NGU7 62 aa11.94□□□□□ -0.5
RAB35-204ENST00000540803 MT-ND6P03923 174 aa11.94□□□□□ -0.5
RAB35-204ENST00000540803 LINC01561Q8N1V8 128 aa11.94□□□□□ -0.5
RAB35-204ENST00000540803 C6orf48Q9UBA6 75 aa11.94□□□□□ -0.5
RAB35-204ENST00000540803 FABP9Q0Z7S8 132 aa11.93□□□□□ -0.5
RAB35-204ENST00000540803 TNXBP22105 4242 aa11.92□□□□□ -0.5
RAB35-204ENST00000540803 TLX1NBP0CAT3 122 aa11.92□□□□□ -0.5
RAB35-204ENST00000540803 C9orf116Q5BN46 136 aaPredicted RBP11.92□□□□□ -0.5
RAB35-204ENST00000540803 PAPPA-AS1Q5QFB9 102 aa11.92□□□□□ -0.5
RAB35-204ENST00000540803 ERASQ7Z444 233 aa11.91□□□□□ -0.5
RAB35-204ENST00000540803 SCGB3A1Q96QR1 104 aa11.91□□□□□ -0.5
RAB35-204ENST00000540803 APOC3P02656 99 aa11.9□□□□□ -0.5
RAB35-204ENST00000540803 C2orf82Q6UX34 121 aa11.9□□□□□ -0.5
RAB35-204ENST00000540803 Q6ZRP5 223 aa11.9□□□□□ -0.5
RAB35-204ENST00000540803 TRBV30A0A0K0K1B3 111 aa11.88□□□□□ -0.51
RAB35-204ENST00000540803 HERVK_113P63121 156 aa11.88□□□□□ -0.51
RAB35-204ENST00000540803 SEC11AP67812 179 aa11.88□□□□□ -0.51
RAB35-204ENST00000540803 FA2HQ7L5A8 372 aa11.88□□□□□ -0.51
RAB35-204ENST00000540803 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
RAB35-204ENST00000540803 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
RAB35-204ENST00000540803 SNAPINO95295 136 aa11.86□□□□□ -0.51
RAB35-204ENST00000540803 MT1HL1P0DM35 61 aa11.86□□□□□ -0.51
RAB35-204ENST00000540803 SVBPQ8N300 66 aa11.86□□□□□ -0.51
RAB35-204ENST00000540803 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
RAB35-204ENST00000540803 SMCO4Q9NRQ5 59 aa11.86□□□□□ -0.51
RAB35-204ENST00000540803 TRAPPC1Q9Y5R8 145 aa11.86□□□□□ -0.51
RAB35-204ENST00000540803 HMCN2Q8NDA2 5059 aa11.85□□□□□ -0.51
RAB35-204ENST00000540803 FAM168BA1KXE4 195 aa11.85□□□□□ -0.51
RAB35-204ENST00000540803 PRSS2P07478 247 aa11.85□□□□□ -0.51
RAB35-204ENST00000540803 NDUFA5Q16718 116 aa11.85□□□□□ -0.51
RAB35-204ENST00000540803 GAGE2EQ4V326 116 aa11.85□□□□□ -0.51
RAB35-204ENST00000540803 PHF5AQ7RTV0 110 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms