RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SNAPINO95295 136 aa5.69□□□□□ -1.5
TRAPPC1-202ENST00000540486 S100PP25815 95 aa5.69□□□□□ -1.5
TRAPPC1-202ENST00000540486 RPL39P62891 51 aaKnown RBP5.69□□□□□ -1.5
TRAPPC1-202ENST00000540486 SVBPQ8N300 66 aa5.69□□□□□ -1.5
TRAPPC1-202ENST00000540486 ZNF664Q8N3J9 261 aa5.69□□□□□ -1.5
TRAPPC1-202ENST00000540486 OR5A1Q8NGJ0 315 aa5.69□□□□□ -1.5
TRAPPC1-202ENST00000540486 GNB1LQ9BYB4 327 aa5.69□□□□□ -1.5
TRAPPC1-202ENST00000540486 LAMTOR2Q9Y2Q5 125 aa5.69□□□□□ -1.5
TRAPPC1-202ENST00000540486 CSDC2Q9Y534 153 aaKnown RBP5.69□□□□□ -1.5
TRAPPC1-202ENST00000540486 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC1-202ENST00000540486 TGIF2-C20orf24A0A0A6YYL0 155 aa5.68□□□□□ -1.5
TRAPPC1-202ENST00000540486 LINC00959A0A1B0GUT2 108 aa5.68□□□□□ -1.5
TRAPPC1-202ENST00000540486 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
TRAPPC1-202ENST00000540486 USP17L23D6RBM5 183 aa5.68□□□□□ -1.5
TRAPPC1-202ENST00000540486 HLA-DQA1P01909 254 aa5.68□□□□□ -1.5
TRAPPC1-202ENST00000540486 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
TRAPPC1-202ENST00000540486 TMEM101Q96IK0 257 aa5.68□□□□□ -1.5
TRAPPC1-202ENST00000540486 OPRPNQ99935 248 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC1-202ENST00000540486 GAGE12HA6NDE8 117 aa5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 PRSS1P07477 247 aa5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 IFI27P40305 119 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 NDUFA5Q16718 116 aa5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 LINC01620Q4KN68 170 aa5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 RNASE13Q5GAN3 156 aaKnown RBP5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 Q8N8P6 123 aa5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 CHCHD10Q8WYQ3 142 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 YPEL4Q96NS1 127 aa5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 ALKBH7Q9BT30 221 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 TIMM21Q9BVV7 248 aa5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 MAP1LC3AQ9H492 121 aa5.67□□□□□ -1.5
TRAPPC1-202ENST00000540486 SLPIP03973 132 aa5.66□□□□□ -1.5
TRAPPC1-202ENST00000540486 RAB5AP20339 215 aa5.66□□□□□ -1.5
TRAPPC1-202ENST00000540486 FOXI1Q12951 378 aa5.66□□□□□ -1.5
TRAPPC1-202ENST00000540486 COX19Q49B96 90 aa5.66□□□□□ -1.5
TRAPPC1-202ENST00000540486 DGAT2L7PQ6IED9 249 aa5.66□□□□□ -1.5
TRAPPC1-202ENST00000540486 TMEM18Q96B42 140 aa5.66□□□□□ -1.5
TRAPPC1-202ENST00000540486 LINC01600Q96MT4 127 aa5.66□□□□□ -1.5
TRAPPC1-202ENST00000540486 CCL25O15444 150 aa5.65□□□□□ -1.5
TRAPPC1-202ENST00000540486 FABP9Q0Z7S8 132 aa5.65□□□□□ -1.5
TRAPPC1-202ENST00000540486 Q6ZUT4 128 aa5.65□□□□□ -1.5
TRAPPC1-202ENST00000540486 LINC01546A6NGU7 62 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 MT-ND6P03923 174 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 XCL1P47992 114 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 MRPS36P82909 103 aaKnown RBP5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 SS18Q15532 418 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 C14orf177Q52M58 125 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 C15orf56Q8N910 161 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 NXT2Q9NPJ8 142 aaKnown RBP5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 SPANXA1Q9NS26 97 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 CRCT1Q9UGL9 99 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 PYGO1Q9Y3Y4 419 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 TRAPPC1Q9Y5R8 145 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 LPAP08519 4548 aa5.64□□□□□ -1.51
TRAPPC1-202ENST00000540486 TRAV13-1A0A0B4J241 112 aa5.63□□□□□ -1.51
TRAPPC1-202ENST00000540486 IGIPA6NJ69 53 aa5.63□□□□□ -1.51
TRAPPC1-202ENST00000540486 C1orf196B1AJZ1 125 aa5.63□□□□□ -1.51
TRAPPC1-202ENST00000540486 K7EMI3 77 aa5.63□□□□□ -1.51
TRAPPC1-202ENST00000540486 SMAGPQ0VAQ4 97 aa5.63□□□□□ -1.51
TRAPPC1-202ENST00000540486 CD164L2Q6UWJ8 174 aa5.63□□□□□ -1.51
TRAPPC1-202ENST00000540486 C2orf66Q6UXQ4 117 aa5.63□□□□□ -1.51
TRAPPC1-202ENST00000540486 PRSS3P2Q8NHM4 247 aa5.63□□□□□ -1.51
TRAPPC1-202ENST00000540486 IGLV4-3A0A075B6K6 122 aa5.62□□□□□ -1.51
TRAPPC1-202ENST00000540486 ODF1Q14990 250 aa5.62□□□□□ -1.51
TRAPPC1-202ENST00000540486 ORMDL2Q53FV1 153 aa5.62□□□□□ -1.51
TRAPPC1-202ENST00000540486 ZC2HC1BQ5TFG8 222 aa5.62□□□□□ -1.51
TRAPPC1-202ENST00000540486 CBLN2Q8IUK8 224 aa5.62□□□□□ -1.51
TRAPPC1-202ENST00000540486 C9orf163Q8N9P6 203 aa5.62□□□□□ -1.51
TRAPPC1-202ENST00000540486 URB1-AS1Q96HZ7 61 aa5.62□□□□□ -1.51
TRAPPC1-202ENST00000540486 CYSLTR1Q9Y271 337 aa5.62□□□□□ -1.51
TRAPPC1-202ENST00000540486 hDV102S1A0JD36 115 aa5.61□□□□□ -1.51
TRAPPC1-202ENST00000540486 B5MCH6 92 aa5.61□□□□□ -1.51
TRAPPC1-202ENST00000540486 HIGD2BQ4VC39 106 aa5.61□□□□□ -1.51
TRAPPC1-202ENST00000540486 CFAP161Q6P656 301 aa5.61□□□□□ -1.51
TRAPPC1-202ENST00000540486 SDIM1Q6ZPB5 146 aa5.61□□□□□ -1.51
TRAPPC1-202ENST00000540486 C18orf32Q8TCD1 76 aa5.61□□□□□ -1.51
TRAPPC1-202ENST00000540486 TOMM6Q96B49 74 aa5.61□□□□□ -1.51
TRAPPC1-202ENST00000540486 AMELXQ99217 191 aa5.61□□□□□ -1.51
TRAPPC1-202ENST00000540486 SMCO4Q9NRQ5 59 aa5.61□□□□□ -1.51
TRAPPC1-202ENST00000540486 GVQW2A0A096LPI5 108 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 IGHV3OR16-9A0A0B4J2B5 98 aa5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 CNBPP62633 177 aaKnown RBP5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 COX6A2Q02221 97 aa5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 LINC00242Q5T6M2 205 aa5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 LINC00173Q6ZV60 143 aa5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 C5orf38Q86SI9 138 aa5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 LINC00526Q96FQ7 95 aa5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 TMEM141Q96I45 108 aa5.6□□□□□ -1.51
TRAPPC1-202ENST00000540486 A0A096LNJ9 63 aa5.59□□□□□ -1.51
TRAPPC1-202ENST00000540486 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
TRAPPC1-202ENST00000540486 A0A0J9YXV3 536 aa5.59□□□□□ -1.51
TRAPPC1-202ENST00000540486 IFITM10A6NMD0 228 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 COLCA2A8K830 154 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 PANO1I0J062 215 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 COX7A2LO14548 114 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 NPSP0C0P6 89 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 LINC00614P0C842 121 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 G0S2P27469 103 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 UBE2D1P51668 147 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 TEX43Q6ZNM6 134 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms