RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 SRP19P09132 144 aaKnown RBP7.29□□□□□ -1.24
CBX3P4-202ENST00000540428 MRPS36P82909 103 aaKnown RBP7.29□□□□□ -1.24
CBX3P4-202ENST00000540428 SPANXA1Q9NS26 97 aa7.29□□□□□ -1.24
CBX3P4-202ENST00000540428 A0A087WZ39 114 aa7.28□□□□□ -1.24
CBX3P4-202ENST00000540428 A0A1B0GW15 77 aa7.28□□□□□ -1.24
CBX3P4-202ENST00000540428 FAM74A3Q4VXF1 159 aa7.28□□□□□ -1.24
CBX3P4-202ENST00000540428 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
CBX3P4-202ENST00000540428 FAM104AQ969W3 186 aa7.28□□□□□ -1.24
CBX3P4-202ENST00000540428 IGLV1-50A0A075B6I6 118 aa7.27□□□□□ -1.25
CBX3P4-202ENST00000540428 SMIM27A0A1W2PRY6 76 aa7.27□□□□□ -1.25
CBX3P4-202ENST00000540428 CKS2P33552 79 aa7.27□□□□□ -1.25
CBX3P4-202ENST00000540428 RPL39P62891 51 aaKnown RBP7.27□□□□□ -1.25
CBX3P4-202ENST00000540428 HBBP68871 147 aa7.27□□□□□ -1.25
CBX3P4-202ENST00000540428 AKAP14Q86UN6 197 aa7.27□□□□□ -1.25
CBX3P4-202ENST00000540428 SMIM2Q9BVW6 85 aa7.27□□□□□ -1.25
CBX3P4-202ENST00000540428 hCG_2014768A0A024R1R8 64 aa7.26□□□□□ -1.25
CBX3P4-202ENST00000540428 FAM168BA1KXE4 195 aa7.26□□□□□ -1.25
CBX3P4-202ENST00000540428 TNFRSF6BO95407 300 aa7.26□□□□□ -1.25
CBX3P4-202ENST00000540428 RPL23P62829 140 aaKnown RBP7.26□□□□□ -1.25
CBX3P4-202ENST00000540428 C10orf25Q5T742 122 aa7.26□□□□□ -1.25
CBX3P4-202ENST00000540428 SMDT1Q9H4I9 107 aa7.26□□□□□ -1.25
CBX3P4-202ENST00000540428 C6orf48Q9UBA6 75 aa7.26□□□□□ -1.25
CBX3P4-202ENST00000540428 IFITM10A6NMD0 228 aa7.25□□□□□ -1.25
CBX3P4-202ENST00000540428 S100A8P05109 93 aa7.25□□□□□ -1.25
CBX3P4-202ENST00000540428 UNQ6190/PRO20217Q6UXQ8 127 aa7.25□□□□□ -1.25
CBX3P4-202ENST00000540428 KRTAP11-1Q8IUC1 163 aa7.25□□□□□ -1.25
CBX3P4-202ENST00000540428 LPAP08519 4548 aa7.24□□□□□ -1.25
CBX3P4-202ENST00000540428 TGIF2-C20orf24A0A0A6YYL0 155 aa7.24□□□□□ -1.25
CBX3P4-202ENST00000540428 TRBV30A0A0K0K1B3 111 aa7.24□□□□□ -1.25
CBX3P4-202ENST00000540428 F8W036 122 aa7.24□□□□□ -1.25
CBX3P4-202ENST00000540428 PPBPP02775 128 aa7.24□□□□□ -1.25
CBX3P4-202ENST00000540428 KRTAP1-4P0C5Y4 121 aa7.24□□□□□ -1.25
CBX3P4-202ENST00000540428 KIAA0087Q14695 138 aa7.24□□□□□ -1.25
CBX3P4-202ENST00000540428 FAM19A5Q7Z5A7 132 aaPredicted RBP7.24□□□□□ -1.25
CBX3P4-202ENST00000540428 D6R8Y8 96 aa7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 M0QXV9 152 aa7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 IFI27P40305 119 aaPredicted RBP7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 ADIRFQ15847 76 aa7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 GAGE2EQ4V326 116 aa7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 GAGE2DQ9UEU5 116 aa7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 NAT8Q9UHE5 227 aa7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 PYGO1Q9Y3Y4 419 aa7.23□□□□□ -1.25
CBX3P4-202ENST00000540428 NDUFC2-KCTD14E9PQ53 114 aa7.22□□□□□ -1.25
CBX3P4-202ENST00000540428 NPYP01303 97 aa7.22□□□□□ -1.25
CBX3P4-202ENST00000540428 UBE2BP63146 152 aa7.22□□□□□ -1.25
CBX3P4-202ENST00000540428 LINC01561Q8N1V8 128 aa7.22□□□□□ -1.25
CBX3P4-202ENST00000540428 A0A1B0GXF2 115 aa7.21□□□□□ -1.26
CBX3P4-202ENST00000540428 RAB5AP20339 215 aa7.21□□□□□ -1.26
CBX3P4-202ENST00000540428 UBE2D1P51668 147 aa7.21□□□□□ -1.26
CBX3P4-202ENST00000540428 LINC00242Q5T6M2 205 aa7.21□□□□□ -1.26
CBX3P4-202ENST00000540428 CARHSP1Q9Y2V2 147 aaKnown RBP7.21□□□□□ -1.26
CBX3P4-202ENST00000540428 IGLV4-3A0A075B6K6 122 aa7.2□□□□□ -1.26
CBX3P4-202ENST00000540428 MRPL54Q6P161 138 aaKnown RBP7.2□□□□□ -1.26
CBX3P4-202ENST00000540428 ORMDL3Q8N138 153 aa7.2□□□□□ -1.26
CBX3P4-202ENST00000540428 PACRGQ96M98 296 aaPredicted RBP7.2□□□□□ -1.26
CBX3P4-202ENST00000540428 C9JQL5 133 aa7.19□□□□□ -1.26
CBX3P4-202ENST00000540428 C9orf129Q5T035 196 aaKnown RBP7.19□□□□□ -1.26
CBX3P4-202ENST00000540428 TEX43Q6ZNM6 134 aa7.19□□□□□ -1.26
CBX3P4-202ENST00000540428 TMEM141Q96I45 108 aa7.19□□□□□ -1.26
CBX3P4-202ENST00000540428 PRSS47A8MTI9 375 aa7.18□□□□□ -1.26
CBX3P4-202ENST00000540428 PEA15Q15121 130 aa7.18□□□□□ -1.26
CBX3P4-202ENST00000540428 C2orf82Q6UX34 121 aa7.18□□□□□ -1.26
CBX3P4-202ENST00000540428 TMEM136Q6ZRR5 245 aa7.18□□□□□ -1.26
CBX3P4-202ENST00000540428 ATP5L2Q7Z4Y8 100 aa7.18□□□□□ -1.26
CBX3P4-202ENST00000540428 NUPR1O60356 82 aa7.17□□□□□ -1.26
CBX3P4-202ENST00000540428 ZNF861PO60384 105 aa7.17□□□□□ -1.26
CBX3P4-202ENST00000540428 PRR4Q16378 134 aa7.17□□□□□ -1.26
CBX3P4-202ENST00000540428 PRELID3AQ96N28 172 aa7.17□□□□□ -1.26
CBX3P4-202ENST00000540428 C2orf88Q9BSF0 95 aa7.17□□□□□ -1.26
CBX3P4-202ENST00000540428 LAMTOR2Q9Y2Q5 125 aa7.17□□□□□ -1.26
CBX3P4-202ENST00000540428 NPSP0C0P6 89 aa7.16□□□□□ -1.26
CBX3P4-202ENST00000540428 PRSS2P07478 247 aa7.15□□□□□ -1.26
CBX3P4-202ENST00000540428 SRSF3P84103 164 aaKnown RBP7.15□□□□□ -1.26
CBX3P4-202ENST00000540428 Q6ZN92 141 aa7.15□□□□□ -1.26
CBX3P4-202ENST00000540428 Q8IZM0 81 aa7.15□□□□□ -1.26
CBX3P4-202ENST00000540428 AMELXQ99217 191 aa7.15□□□□□ -1.26
CBX3P4-202ENST00000540428 CYSLTR1Q9Y271 337 aa7.15□□□□□ -1.26
CBX3P4-202ENST00000540428 CKS1BP61024 79 aa7.14□□□□□ -1.27
CBX3P4-202ENST00000540428 LBHQ53QV2 105 aaPredicted RBP7.14□□□□□ -1.27
CBX3P4-202ENST00000540428 FAM19A3Q7Z5A8 133 aa7.14□□□□□ -1.27
CBX3P4-202ENST00000540428 MAP1LC3AQ9H492 121 aa7.14□□□□□ -1.27
CBX3P4-202ENST00000540428 C22orf24Q9Y442 160 aa7.14□□□□□ -1.27
CBX3P4-202ENST00000540428 A0A0U1RQV1 116 aa7.13□□□□□ -1.27
CBX3P4-202ENST00000540428 C6orf226Q5I0X4 101 aa7.13□□□□□ -1.27
CBX3P4-202ENST00000540428 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
CBX3P4-202ENST00000540428 LINC00173Q6ZV60 143 aa7.13□□□□□ -1.27
CBX3P4-202ENST00000540428 VCX2Q9H322 139 aa7.13□□□□□ -1.27
CBX3P4-202ENST00000540428 TP73-AS1Q9UF72 201 aa7.13□□□□□ -1.27
CBX3P4-202ENST00000540428 MUC2Q02817 5179 aa7.12□□□□□ -1.27
CBX3P4-202ENST00000540428 LOC389332A0A1B0GUA5 103 aa7.12□□□□□ -1.27
CBX3P4-202ENST00000540428 K7EMI3 77 aa7.12□□□□□ -1.27
CBX3P4-202ENST00000540428 SEC11AP67812 179 aa7.12□□□□□ -1.27
CBX3P4-202ENST00000540428 ORMDL2Q53FV1 153 aa7.12□□□□□ -1.27
CBX3P4-202ENST00000540428 Q8N8P6 123 aa7.12□□□□□ -1.27
CBX3P4-202ENST00000540428 TOMM7Q9P0U1 55 aa7.12□□□□□ -1.27
CBX3P4-202ENST00000540428 HERVK_113P63121 156 aa7.11□□□□□ -1.27
CBX3P4-202ENST00000540428 PAPPA-AS1Q5QFB9 102 aa7.11□□□□□ -1.27
CBX3P4-202ENST00000540428 LINC00469Q8N7U9 141 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms