RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CCDC140Q96MF4 163 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 RHPN1-AS1Q9BWJ2 59 aa6.41□□□□□ -1.38
DDB1-217ENST00000540166 A6NDX4 124 aa6.4□□□□□ -1.38
DDB1-217ENST00000540166 USP17L23D6RBM5 183 aa6.4□□□□□ -1.38
DDB1-217ENST00000540166 POM121L12Q8N7R1 296 aa6.4□□□□□ -1.38
DDB1-217ENST00000540166 ADAMTSL4-AS1Q5T5F5 129 aa6.4□□□□□ -1.39
DDB1-217ENST00000540166 TOMM7Q9P0U1 55 aa6.4□□□□□ -1.39
DDB1-217ENST00000540166 A8MZ25 164 aa6.4□□□□□ -1.39
DDB1-217ENST00000540166 CCL24O00175 119 aa6.4□□□□□ -1.39
DDB1-217ENST00000540166 MALP21145 153 aa6.4□□□□□ -1.39
DDB1-217ENST00000540166 C9orf66Q5T8R8 295 aa6.4□□□□□ -1.39
DDB1-217ENST00000540166 C14orf132Q9NPU4 83 aa6.4□□□□□ -1.39
DDB1-217ENST00000540166 PROK1P58294 105 aa6.39□□□□□ -1.39
DDB1-217ENST00000540166 SNRPD3P62318 126 aaKnown RBP6.39□□□□□ -1.39
DDB1-217ENST00000540166 FSHBP01225 129 aa6.39□□□□□ -1.39
DDB1-217ENST00000540166 GHRHP01286 108 aa6.39□□□□□ -1.39
DDB1-217ENST00000540166 RNASE3P12724 160 aaKnown RBP6.39□□□□□ -1.39
DDB1-217ENST00000540166 C20orf197Q8N268 126 aa6.39□□□□□ -1.39
DDB1-217ENST00000540166 VSIG2Q96IQ7 327 aa6.39□□□□□ -1.39
DDB1-217ENST00000540166 IGHG2P01859 326 aa6.39□□□□□ -1.39
DDB1-217ENST00000540166 C16orf95Q9H693 158 aa6.39□□□□□ -1.39
DDB1-217ENST00000540166 TRAV13-2A0A0B4J235 113 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 WIPF1O43516 503 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 HIST2H2BDQ6DRA6 164 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 UNQ9165/PRO28630Q6UXU0 137 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 AMELXQ99217 191 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 KLK9Q9UKQ9 250 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 TRAV12-2A0A075B6T6 113 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 FAM223BA6NKX1 122 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 PFN2P35080 140 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 FAM223AQ8IWN6 122 aa6.38□□□□□ -1.39
DDB1-217ENST00000540166 A0A087WVE0 104 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 FAM236DA0A1B0GTK5 79 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 FAM236CP0DP71 79 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 LINC00158P58513 81 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 RBM3P98179 157 aaKnown RBP6.37□□□□□ -1.39
DDB1-217ENST00000540166 C20orf173Q96LM9 149 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.37□□□□□ -1.39
DDB1-217ENST00000540166 TRAV23DV6A0A075B6W5 121 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 IGKV2-29A2NJV5 120 aaPredicted RBP6.37□□□□□ -1.39
DDB1-217ENST00000540166 TRBV12-3P01733 135 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 LINC00308Q8TCZ7 52 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 ZANQ9Y493 2812 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 TRBV6-5A0A0K0K1A5 114 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 KNCNA6PVL3 124 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 NDUFC2O95298 119 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 Q8N6K4 173 aa6.37□□□□□ -1.39
DDB1-217ENST00000540166 NOTCH1P46531 2555 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 NDUFA4O00483 81 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 SMCR5Q8TEV8 140 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 UBL5Q9BZL1 73 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 PAX4O43316 350 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 EIF4EBP3O60516 100 aaPredicted RBP6.36□□□□□ -1.39
DDB1-217ENST00000540166 ZNF575Q86XF7 245 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 IGHV1OR15-1A0A075B7D0 117 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 IGKV3OR2-268A0A0C4DH90 116 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 M0QY20 66 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 DEFB136Q30KP8 78 aa6.36□□□□□ -1.39
DDB1-217ENST00000540166 IGHV3-38A0A0C4DH36 116 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 SPINK13Q1W4C9 94 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 ZNF702PQ9H963 129 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 PYGO1Q9Y3Y4 419 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 NBPF19A0A087WUL8 3843 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 TIMM17BO60830 172 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 C5orf56Q8N8D9 126 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 DCANP1Q8TF63 244 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 BRK1Q8WUW1 75 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 USMG5Q96IX5 58 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 CDKN2A-AS1Q9UH64 79 aa6.35□□□□□ -1.39
DDB1-217ENST00000540166 ZFHX3Q15911 3703 aa6.34□□□□□ -1.39
DDB1-217ENST00000540166 UBE2L6O14933 153 aa6.34□□□□□ -1.39
DDB1-217ENST00000540166 C5orf38Q86SI9 138 aa6.34□□□□□ -1.39
DDB1-217ENST00000540166 MRPS36P82909 103 aaKnown RBP6.34□□□□□ -1.39
DDB1-217ENST00000540166 Q6JHZ5 121 aa6.34□□□□□ -1.39
DDB1-217ENST00000540166 PRO0628Q9UI54 55 aa6.34□□□□□ -1.39
DDB1-217ENST00000540166 A0A0U1RQV1 116 aa6.33□□□□□ -1.4
DDB1-217ENST00000540166 PSMB8P28062 276 aa6.33□□□□□ -1.4
DDB1-217ENST00000540166 RPL36AP83881 106 aaKnown RBP6.33□□□□□ -1.4
DDB1-217ENST00000540166 RPL36ALQ969Q0 106 aaKnown RBP6.33□□□□□ -1.4
DDB1-217ENST00000540166 LINC01600Q96MT4 127 aa6.33□□□□□ -1.4
DDB1-217ENST00000540166 H0YGX0 51 aa6.33□□□□□ -1.4
DDB1-217ENST00000540166 LECT2O14960 151 aa6.33□□□□□ -1.4
DDB1-217ENST00000540166 V9GYY9 64 aa6.33□□□□□ -1.4
DDB1-217ENST00000540166 NDUFA1O15239 70 aa6.33□□□□□ -1.4
DDB1-217ENST00000540166 FAM222AQ5U5X8 452 aa6.33□□□□□ -1.4
DDB1-217ENST00000540166 SND1-IT1Q9HBX3 110 aa6.32□□□□□ -1.4
DDB1-217ENST00000540166 HAMPP81172 84 aa6.32□□□□□ -1.4
DDB1-217ENST00000540166 FAM19A4Q96LR4 140 aa6.32□□□□□ -1.4
DDB1-217ENST00000540166 ORMDL1Q9P0S3 153 aa6.32□□□□□ -1.4
DDB1-217ENST00000540166 KIF25-AS1Q9Y6Z4 181 aa6.32□□□□□ -1.4
DDB1-217ENST00000540166 RPL35AP18077 110 aaKnown RBP6.31□□□□□ -1.4
DDB1-217ENST00000540166 NCR3O14931 201 aa6.31□□□□□ -1.4
DDB1-217ENST00000540166 LINC00315P59091 139 aa6.31□□□□□ -1.4
DDB1-217ENST00000540166 PIK3CD-AS1Q5SR53 167 aa6.31□□□□□ -1.4
DDB1-217ENST00000540166 C11orf68Q9H3H3 251 aaKnown RBP6.31□□□□□ -1.4
DDB1-217ENST00000540166 U3KQE9 123 aa6.31□□□□□ -1.4
DDB1-217ENST00000540166 IGHV3-16A0A0C4DH30 117 aa6.31□□□□□ -1.4
DDB1-217ENST00000540166 UBE2E2Q96LR5 201 aa6.3□□□□□ -1.4
DDB1-217ENST00000540166 LITAFQ99732 161 aa6.3□□□□□ -1.4
DDB1-217ENST00000540166 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms