RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 CSMD3Q7Z407 3707 aa4.32□□□□□ -1.72
SNHG1-212ENST00000539975 A0A087WTM6 91 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 LINC00959A0A1B0GUT2 108 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 COLCA2A8K830 154 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 SCO1O75880 301 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 APOMO95445 188 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 HBDP02042 147 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 NDUFA6P56556 154 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-212ENST00000539975 BAALCQ8WXS3 180 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 CHCHD10Q8WYQ3 142 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-212ENST00000539975 TOMM6Q96B49 74 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 YPEL4Q96NS1 127 aa4.31□□□□□ -1.72
SNHG1-212ENST00000539975 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-212ENST00000539975 COX7A2LO14548 114 aa4.3□□□□□ -1.72
SNHG1-212ENST00000539975 LECT2O14960 151 aa4.3□□□□□ -1.72
SNHG1-212ENST00000539975 ATP5LO75964 103 aa4.3□□□□□ -1.72
SNHG1-212ENST00000539975 RNASE13Q5GAN3 156 aaKnown RBP4.3□□□□□ -1.72
SNHG1-212ENST00000539975 CD164L2Q6UWJ8 174 aa4.3□□□□□ -1.72
SNHG1-212ENST00000539975 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-212ENST00000539975 Q6ZUT4 128 aa4.3□□□□□ -1.72
SNHG1-212ENST00000539975 SPATA12Q7Z6I5 190 aa4.3□□□□□ -1.72
SNHG1-212ENST00000539975 NTN5Q8WTR8 489 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-212ENST00000539975 TIMM17AQ99595 171 aa4.3□□□□□ -1.72
SNHG1-212ENST00000539975 GEMIN7Q9H840 131 aaKnown RBP4.3□□□□□ -1.72
SNHG1-212ENST00000539975 IGLV4-3A0A075B6K6 122 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 IGLV5-52A0A0A0MRZ9 124 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 hDV102S1A0JD36 115 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 LINC01546A6NGU7 62 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 C16orf90A8MZG2 172 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 PRSS1P07477 247 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 MAJINQ3KP22 176 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 Q8N814 137 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 PACRGQ96M98 296 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-212ENST00000539975 OPRPNQ99935 248 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-212ENST00000539975 DNAH7Q8WXX0 4024 aa4.29□□□□□ -1.72
SNHG1-212ENST00000539975 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-212ENST00000539975 IGHV1-58A0A0C4DH39 117 aa4.28□□□□□ -1.72
SNHG1-212ENST00000539975 IGIPA6NJ69 53 aa4.28□□□□□ -1.72
SNHG1-212ENST00000539975 HERVK_113P63121 156 aa4.28□□□□□ -1.72
SNHG1-212ENST00000539975 PMVKQ15126 192 aa4.28□□□□□ -1.72
SNHG1-212ENST00000539975 HSPB8Q9UJY1 196 aa4.28□□□□□ -1.72
SNHG1-212ENST00000539975 PKIGQ9Y2B9 76 aa4.28□□□□□ -1.72
SNHG1-212ENST00000539975 STARD9Q9P2P6 4700 aa4.28□□□□□ -1.72
SNHG1-212ENST00000539975 LRCOL1A6NCL2 159 aa4.27□□□□□ -1.73
SNHG1-212ENST00000539975 H3BRM9 83 aa4.27□□□□□ -1.73
SNHG1-212ENST00000539975 LEPROTL1O95214 131 aa4.27□□□□□ -1.73
SNHG1-212ENST00000539975 PRSS2P07478 247 aa4.27□□□□□ -1.73
SNHG1-212ENST00000539975 SMIM6P0DI80 62 aa4.27□□□□□ -1.73
SNHG1-212ENST00000539975 PMCHL1Q16048 86 aa4.27□□□□□ -1.73
SNHG1-212ENST00000539975 C5orf38Q86SI9 138 aa4.27□□□□□ -1.73
SNHG1-212ENST00000539975 PCP4L1A6NKN8 68 aa4.26□□□□□ -1.73
SNHG1-212ENST00000539975 SERF1AO75920 110 aa4.26□□□□□ -1.73
SNHG1-212ENST00000539975 UBE2D1P51668 147 aa4.26□□□□□ -1.73
SNHG1-212ENST00000539975 MAPKAPK5-AS1Q8N8E1 139 aa4.26□□□□□ -1.73
SNHG1-212ENST00000539975 DPH3Q96FX2 82 aa4.26□□□□□ -1.73
SNHG1-212ENST00000539975 AMELXQ99217 191 aa4.26□□□□□ -1.73
SNHG1-212ENST00000539975 C12orf57Q99622 126 aa4.26□□□□□ -1.73
SNHG1-212ENST00000539975 CST9LQ9H4G1 147 aa4.26□□□□□ -1.73
SNHG1-212ENST00000539975 TINCRA0A1B0GVN0 87 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 A0A1B0GVY2 172 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 F8WDY8 70 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST1H2BKO60814 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST1H2BJP06899 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST1H2BOP23527 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST1H2BBP33778 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST1H2BDP58876 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 CKS1BP61024 79 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST1H2BCP62807 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST2H2BEQ16778 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIGD2BQ4VC39 106 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 C6orf226Q5I0X4 101 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-212ENST00000539975 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 FAM19A2Q8N3H0 131 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 OR10D4PQ8NGN7 298 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST1H2BHQ93079 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 IFI27L1Q96BM0 104 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST1H2BNQ99877 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 HIST1H2BMQ99879 126 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 MAP1LC3CQ9BXW4 147 aa4.25□□□□□ -1.73
SNHG1-212ENST00000539975 IGHV3-64A0A075B6Q5 118 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 A0A087WZ39 114 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 GVQW2A0A096LPI5 108 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-212ENST00000539975 IGHV3OR16-9A0A0B4J2B5 98 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 A0A0J9YXV3 536 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 H0Y8G0 127 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 FABP4P15090 132 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 SPAG11BQ08648 103 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 PDZD11Q5EBL8 140 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 KRTAP26-1Q6PEX3 210 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 LINC01561Q8N1V8 128 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 ORAOV1Q8WV07 137 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 URB1-AS1Q96HZ7 61 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 CAMK2N2Q96S95 79 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 TOMM7Q9P0U1 55 aa4.24□□□□□ -1.73
SNHG1-212ENST00000539975 NDUFA1O15239 70 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 S100A2P29034 98 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 CNBPP62633 177 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms