RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 PRSS3P2Q8NHM4 247 aa6.83□□□□□ -1.32
HMGA2-209ENST00000539662 YPEL4Q96NS1 127 aa6.83□□□□□ -1.32
HMGA2-209ENST00000539662 PYGO1Q9Y3Y4 419 aa6.83□□□□□ -1.32
HMGA2-209ENST00000539662 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
HMGA2-209ENST00000539662 IGLV4-69A0A075B6H9 119 aa6.82□□□□□ -1.32
HMGA2-209ENST00000539662 IGHV3-64A0A075B6Q5 118 aa6.82□□□□□ -1.32
HMGA2-209ENST00000539662 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
HMGA2-209ENST00000539662 IGIPA6NJ69 53 aa6.82□□□□□ -1.32
HMGA2-209ENST00000539662 IFITM10A6NMD0 228 aa6.82□□□□□ -1.32
HMGA2-209ENST00000539662 COX7A2LO14548 114 aa6.82□□□□□ -1.32
HMGA2-209ENST00000539662 KRTAP10-4P60372 401 aaPredicted RBP6.82□□□□□ -1.32
HMGA2-209ENST00000539662 SMAGPQ0VAQ4 97 aa6.82□□□□□ -1.32
HMGA2-209ENST00000539662 SVBPQ8N300 66 aa6.82□□□□□ -1.32
HMGA2-209ENST00000539662 URB1-AS1Q96HZ7 61 aa6.82□□□□□ -1.32
HMGA2-209ENST00000539662 NXT2Q9NPJ8 142 aaKnown RBP6.82□□□□□ -1.32
HMGA2-209ENST00000539662 SNAPINO95295 136 aa6.81□□□□□ -1.32
HMGA2-209ENST00000539662 INAFM2P0DMQ5 153 aa6.81□□□□□ -1.32
HMGA2-209ENST00000539662 ORMDL2Q53FV1 153 aa6.81□□□□□ -1.32
HMGA2-209ENST00000539662 LINC00242Q5T6M2 205 aa6.81□□□□□ -1.32
HMGA2-209ENST00000539662 TMEM141Q96I45 108 aa6.81□□□□□ -1.32
HMGA2-209ENST00000539662 CYSLTR1Q9Y271 337 aa6.81□□□□□ -1.32
HMGA2-209ENST00000539662 FLG2Q5D862 2391 aaPredicted RBP6.81□□□□□ -1.32
HMGA2-209ENST00000539662 A0A096LNI7 61 aa6.8□□□□□ -1.32
HMGA2-209ENST00000539662 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.8□□□□□ -1.32
HMGA2-209ENST00000539662 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
HMGA2-209ENST00000539662 ZNF561-AS1K7EIQ3 104 aa6.8□□□□□ -1.32
HMGA2-209ENST00000539662 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
HMGA2-209ENST00000539662 MALP21145 153 aa6.8□□□□□ -1.32
HMGA2-209ENST00000539662 UBE2D1P51668 147 aa6.8□□□□□ -1.32
HMGA2-209ENST00000539662 CIRBPQ14011 172 aaKnown RBP6.8□□□□□ -1.32
HMGA2-209ENST00000539662 Q6ZRU5 148 aa6.8□□□□□ -1.32
HMGA2-209ENST00000539662 CBLN2Q8IUK8 224 aa6.8□□□□□ -1.32
HMGA2-209ENST00000539662 AMELXQ99217 191 aa6.8□□□□□ -1.32
HMGA2-209ENST00000539662 TRAPPC1Q9Y5R8 145 aa6.8□□□□□ -1.32
HMGA2-209ENST00000539662 A0A087WYN8 130 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 A0A0J9YXV3 536 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 LINC01546A6NGU7 62 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 MT-ND6P03923 174 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 SYCNQ0VAF6 134 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 NDUFA5Q16718 116 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 COX19Q49B96 90 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 SPACA4Q8TDM5 124 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 TOMM6Q96B49 74 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 PKHD1L1Q86WI1 4243 aa6.79□□□□□ -1.32
HMGA2-209ENST00000539662 A0A096LNJ9 63 aa6.78□□□□□ -1.32
HMGA2-209ENST00000539662 K7EMI3 77 aa6.78□□□□□ -1.32
HMGA2-209ENST00000539662 SPAG11BQ08648 103 aa6.78□□□□□ -1.32
HMGA2-209ENST00000539662 C10orf25Q5T742 122 aa6.78□□□□□ -1.32
HMGA2-209ENST00000539662 TEX43Q6ZNM6 134 aa6.78□□□□□ -1.32
HMGA2-209ENST00000539662 C18orf32Q8TCD1 76 aa6.78□□□□□ -1.32
HMGA2-209ENST00000539662 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
HMGA2-209ENST00000539662 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
HMGA2-209ENST00000539662 SCGB1D1O95968 90 aa6.77□□□□□ -1.33
HMGA2-209ENST00000539662 HNRNPA3P51991 378 aaKnown RBP6.77□□□□□ -1.33
HMGA2-209ENST00000539662 KIAA0087Q14695 138 aa6.77□□□□□ -1.33
HMGA2-209ENST00000539662 ORAOV1Q8WV07 137 aa6.77□□□□□ -1.33
HMGA2-209ENST00000539662 VCX2Q9H322 139 aa6.77□□□□□ -1.33
HMGA2-209ENST00000539662 A0A087WZ39 114 aa6.76□□□□□ -1.33
HMGA2-209ENST00000539662 PMCHL1Q16048 86 aa6.76□□□□□ -1.33
HMGA2-209ENST00000539662 MAJINQ3KP22 176 aa6.76□□□□□ -1.33
HMGA2-209ENST00000539662 DPH3Q96FX2 82 aa6.76□□□□□ -1.33
HMGA2-209ENST00000539662 SCGB3A1Q96QR1 104 aa6.76□□□□□ -1.33
HMGA2-209ENST00000539662 CAMK2N2Q96S95 79 aa6.76□□□□□ -1.33
HMGA2-209ENST00000539662 TIMM17AQ99595 171 aa6.76□□□□□ -1.33
HMGA2-209ENST00000539662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.75□□□□□ -1.33
HMGA2-209ENST00000539662 APOMO95445 188 aa6.75□□□□□ -1.33
HMGA2-209ENST00000539662 UNQ6190/PRO20217Q6UXQ8 127 aa6.75□□□□□ -1.33
HMGA2-209ENST00000539662 FA2HQ7L5A8 372 aa6.75□□□□□ -1.33
HMGA2-209ENST00000539662 ERASQ7Z444 233 aa6.75□□□□□ -1.33
HMGA2-209ENST00000539662 PLA2G1BP04054 148 aaKnown RBP6.74□□□□□ -1.33
HMGA2-209ENST00000539662 GAGE2BQ13066 116 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 C2orf82Q6UX34 121 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 Q6ZN92 141 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 FAM19A3Q7Z5A8 133 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 STPG4Q8N801 248 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 OR10D4PQ8NGN7 298 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 C2orf48Q96LS8 159 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 C2orf88Q9BSF0 95 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 C6orf48Q9UBA6 75 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 CDKN2A-AS1Q9UH64 79 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 FAT3Q8TDW7 4589 aa6.74□□□□□ -1.33
HMGA2-209ENST00000539662 HERC1Q15751 4861 aa6.73□□□□□ -1.33
HMGA2-209ENST00000539662 NPSP0C0P6 89 aa6.73□□□□□ -1.33
HMGA2-209ENST00000539662 LINC00614P0C842 121 aa6.73□□□□□ -1.33
HMGA2-209ENST00000539662 RPL37AP61513 92 aaKnown RBP6.73□□□□□ -1.33
HMGA2-209ENST00000539662 CST9LQ9H4G1 147 aa6.73□□□□□ -1.33
HMGA2-209ENST00000539662 SMCO4Q9NRQ5 59 aa6.73□□□□□ -1.33
HMGA2-209ENST00000539662 A0A1W2PNN7 141 aa6.72□□□□□ -1.33
HMGA2-209ENST00000539662 PTTG1IPP53801 180 aa6.72□□□□□ -1.33
HMGA2-209ENST00000539662 LOC107984640A0A0U1RRK4 108 aa6.71□□□□□ -1.34
HMGA2-209ENST00000539662 C9orf116Q5BN46 136 aaPredicted RBP6.71□□□□□ -1.34
HMGA2-209ENST00000539662 CDIP1Q9H305 208 aa6.71□□□□□ -1.34
HMGA2-209ENST00000539662 MRPL35Q9NZE8 188 aaKnown RBP6.71□□□□□ -1.34
HMGA2-209ENST00000539662 COLCA2A8K830 154 aa6.7□□□□□ -1.34
HMGA2-209ENST00000539662 J3QL48 77 aa6.7□□□□□ -1.34
HMGA2-209ENST00000539662 NDUFA1O15239 70 aa6.7□□□□□ -1.34
HMGA2-209ENST00000539662 SCO1O75880 301 aa6.7□□□□□ -1.34
HMGA2-209ENST00000539662 TRGC2P03986 189 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms